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Search of human proteins with 56117848
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56117848 steroidogenic acute regulatory protein isoform 2
[Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56117848 steroidogenic acute regulatory protein isoform 2 [Ho... 536 e-153
gi|56243551 steroidogenic acute regulatory protein isoform 1 [Ho... 525 e-149
gi|31543657 StAR-related lipid transfer (START) domain containin... 123 1e-28
gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens] 57 2e-08
gi|21040261 START domain containing protein 6 [Homo sapiens] 56 4e-08
gi|21040247 StAR-related lipid transfer (START) domain containin... 46 4e-05
gi|116812600 START domain containing 10 [Homo sapiens] 37 0.018
gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens] 32 0.76
gi|24430139 RNA polymerase II associated protein 1 [Homo sapiens] 30 2.9
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 29 3.8
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 29 3.8
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 29 3.8
gi|41281907 StAR-related lipid transfer (START) domain containin... 29 3.8
gi|16445031 StAR-related lipid transfer (START) domain containin... 29 3.8
gi|41281898 StAR-related lipid transfer (START) domain containin... 29 3.8
gi|189027048 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens] 29 4.9
gi|189027046 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens] 29 4.9
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 28 6.4
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 28 6.4
gi|28827795 chromatin modifying protein 4B [Homo sapiens] 28 8.4
>gi|56117848 steroidogenic acute regulatory protein isoform 2 [Homo
sapiens]
Length = 267
Score = 536 bits (1381), Expect = e-153
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG
Sbjct: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
Query: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF
Sbjct: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
Query: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGGPRDFVSVRCAKRRGSTCV 180
RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGGPRDFVSVRCAKRRGSTCV
Sbjct: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGGPRDFVSVRCAKRRGSTCV 180
Query: 181 LAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSIINQ 240
LAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSIINQ
Sbjct: 181 LAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSIINQ 240
Query: 241 VLSQTQVDFANHLRKRLESHPASEARC 267
VLSQTQVDFANHLRKRLESHPASEARC
Sbjct: 241 VLSQTQVDFANHLRKRLESHPASEARC 267
>gi|56243551 steroidogenic acute regulatory protein isoform 1 [Homo
sapiens]
Length = 285
Score = 525 bits (1352), Expect = e-149
Identities = 267/285 (93%), Positives = 267/285 (93%), Gaps = 18/285 (6%)
Query: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG
Sbjct: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
Query: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF
Sbjct: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
Query: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIG------------------G 162
RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIG G
Sbjct: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG 180
Query: 163 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT 222
PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT
Sbjct: 181 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT 240
Query: 223 WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC 267
WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC
Sbjct: 241 WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC 285
>gi|31543657 StAR-related lipid transfer (START) domain containing 3
[Homo sapiens]
Length = 445
Score = 123 bits (309), Expect = 1e-28
Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 18/208 (8%)
Query: 68 YSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVD 127
+S QE Y++QG+EA IL+ +E WK E + GD V + VP GK F L+ +
Sbjct: 231 FSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLP 290
Query: 128 QPMERLYEELVERMEAMGEWNPNVKEIKVLQKI---------------GG---PRDFVSV 169
P E +Y+E++ + E M WN V ++LQ++ GG PRDFV+V
Sbjct: 291 CPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNV 350
Query: 170 RCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDL 229
R +RR + +G+AT P +R E+GP ++ A +P W+L+ DL
Sbjct: 351 RRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDL 410
Query: 230 KGWLPKSIINQVLSQTQVDFANHLRKRL 257
KG LP+ +I+Q L+ T +FA HLR+R+
Sbjct: 411 KGRLPRYLIHQSLAATMFEFAFHLRQRI 438
>gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens]
Length = 213
Score = 56.6 bits (135), Expect = 2e-08
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 77 QQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKV-VPDVGKVFRLEVVVDQPMERLYE 135
Q E +K L + GWK ++ NG V + V G ++R E +V +E +++
Sbjct: 8 QMSEAVAEKMLQYRRDTAGWKI-CREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWD 66
Query: 136 ELVERMEAMG-EWNPNVKEIKVLQ------------------KIGGPRDFVSVRCAKRRG 176
+ + + +W+ NV +++Q K+ PRDFV + KR
Sbjct: 67 CVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYE 126
Query: 177 STCVLAGMA-TDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPK 235
+ + + P + G +R + P PL G P+KT L DL G+LP+
Sbjct: 127 DGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQ 186
Query: 236 SIINQVLSQTQVDFANHLRKRLE 258
++++ ++ F +L+K ++
Sbjct: 187 NVVDSFFPRSMTRFYANLQKAVK 209
>gi|21040261 START domain containing protein 6 [Homo sapiens]
Length = 220
Score = 55.8 bits (133), Expect = 4e-08
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 80 EEAMQKALGILSNQEGWK--KESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEEL 137
++ Q+ LG + GWK K S++ S+ G ++R+E ++ + +L + L
Sbjct: 8 QQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFH--GNLYRVEGIIPESPAKLSDFL 65
Query: 138 VERMEAMGEWNPNVKEIKVLQKIGG------------------PRDFVSVRCAKR-RGST 178
+ + + W+ +++ ++ +I PRDF+ + KR G+
Sbjct: 66 YQTGDRI-TWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGNM 124
Query: 179 CVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSII 238
+++ + DF P IR + P V P+ +P+ +KL + +++G L SII
Sbjct: 125 NIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSII 184
Query: 239 NQVLSQTQVDFANHLRKRLESHPASEAR 266
+ + V+F + + +++H R
Sbjct: 185 EKTMPSNLVNFILNAKDGIKAHRTPSRR 212
>gi|21040247 StAR-related lipid transfer (START) domain containing 4
[Homo sapiens]
Length = 205
Score = 45.8 bits (107), Expect = 4e-05
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Query: 96 WKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIK 155
W+K S++ NG ++ V D ++ + P ++ L+ ++ + + N ++
Sbjct: 41 WRKPSEEFNGYLYKAQGVIDDLVYSIIDHIRPGPCRLDWDSLMTSLDILENFEENCCVMR 100
Query: 156 V-----LQKIGGPRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLH 210
L I PR+FV + G++ D+ ++ +R + P
Sbjct: 101 YTTAGQLWNIISPREFVDFSYTVGYKEGLLSCGISLDWDE--KRPEFVRGYNHPCGWFCV 158
Query: 211 PLAGSPSKTKLTWLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRL 257
PL +P+++ LT + DL+G +P+S ++ ++ T +F LRK L
Sbjct: 159 PLKDNPNQSLLTGYIQTDLRGMIPQSAVDTAMASTLTNFYGDLRKAL 205
>gi|116812600 START domain containing 10 [Homo sapiens]
Length = 291
Score = 37.0 bits (84), Expect = 0.018
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 127 DQPMERLYEELVERMEAMGEWNPNVKE------IKVLQKIG----------GPRDFVSVR 170
D P E LY+ L + +E +W+ NV E + V +G RD +++R
Sbjct: 76 DVPAETLYDVLHD-IEYRKKWDSNVIETFDIARLTVNADVGYYSWRCPKPLKNRDVITLR 134
Query: 171 CAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLK 230
G+ ++ + P +K ++RA T ++ + P +T+L +D K
Sbjct: 135 SWLPMGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQ--STGPKSCVITYLAQVDPK 192
Query: 231 GWLPKSIINQ 240
G LPK ++N+
Sbjct: 193 GSLPKWVVNK 202
>gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens]
Length = 4314
Score = 31.6 bits (70), Expect = 0.76
Identities = 23/122 (18%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 42 GPTPSTWINQVRRRSSLLGSRLEETLYSDQELAYLQQGEEAMQKALGIL------SNQEG 95
G TPS ++ + S++ S+ +E L + ++LQ G + +A ++ + ++
Sbjct: 2866 GATPSRYMTFLHVYSAISSSKKKELL---KRQSHLQAGVSKLNEAKALVDELNRKAGEQS 2922
Query: 96 WKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIK 155
+++QD D + + + + +++ R+ EE+V+ E + + +KE++
Sbjct: 2923 VLLKTKQDEADAALQMITVSMQDASEQKTELERLKHRIAEEVVKIEERKNKIDDELKEVQ 2982
Query: 156 VL 157
L
Sbjct: 2983 PL 2984
>gi|24430139 RNA polymerase II associated protein 1 [Homo sapiens]
Length = 1393
Score = 29.6 bits (65), Expect = 2.9
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 60 GSRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP---DV 116
G E YS QEL +L + + + Q+AL + + + + GD++ V+ D
Sbjct: 382 GEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLAGSVLSLLLDA 441
Query: 117 GKVFRLEVVVDQPMERLYEELVERMEAM 144
G +F L +D ++ + + + A+
Sbjct: 442 GFLFLLRFSLDDRVDGVIATAIRALRAL 469
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 163 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPE-QKGVIRAEHGPTCMVLHPLAGSPSK-TK 220
PRDF V + G V+A + +MP + ++R E P+ +L P+ + T+
Sbjct: 4516 PRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSRKMVRGEILPSAWILQPITVEGKEVTR 4575
Query: 221 LTWLLSIDL 229
+ +L ++L
Sbjct: 4576 VIYLAQVEL 4584
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 163 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPE-QKGVIRAEHGPTCMVLHPLAGSPSK-TK 220
PRDF V + G V+A + +MP + ++R E P+ +L P+ + T+
Sbjct: 4516 PRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSRKMVRGEILPSAWILQPITVEGKEVTR 4575
Query: 221 LTWLLSIDL 229
+ +L ++L
Sbjct: 4576 VIYLAQVEL 4584
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 163 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPE-QKGVIRAEHGPTCMVLHPLAGSPSK-TK 220
PRDF V + G V+A + +MP + ++R E P+ +L P+ + T+
Sbjct: 4516 PRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSRKMVRGEILPSAWILQPITVEGKEVTR 4575
Query: 221 LTWLLSIDL 229
+ +L ++L
Sbjct: 4576 VIYLAQVEL 4584
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 29.3 bits (64), Expect = 3.8
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 59 LGSRLEETLYSDQE-LAYLQQG--EEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP- 114
LG++LEE+ + L +L QG +EA +K +GW S DN D KV
Sbjct: 887 LGTQLEESGATFHTYLNHLIQGLQKEAKEKF-------KGWVTCSSTDNTDLAFKKVGDG 939
Query: 115 DVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGGP----------- 163
+ K+++ V V+ P + ++ W+ + + KV++ +
Sbjct: 940 NPLKLWKASVEVEAPPSVVLNRVLRERHL---WDEDFVQWKVVETLDRQTEIYQYVLNSM 996
Query: 164 -----RDFVSVRCAKRR--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSP 216
RDFV +R K C L ++ + + G +RA + ++ P
Sbjct: 997 APHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGSG- 1054
Query: 217 SKTKLTWLLSIDLKGWLPK 235
K++LT + IDLKG P+
Sbjct: 1055 -KSRLTHICRIDLKGHSPE 1072
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 29.3 bits (64), Expect = 3.8
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 59 LGSRLEETLYSDQE-LAYLQQG--EEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP- 114
LG++LEE+ + L +L QG +EA +K +GW S DN D KV
Sbjct: 777 LGTQLEESGATFHTYLNHLIQGLQKEAKEKF-------KGWVTCSSTDNTDLAFKKVGDG 829
Query: 115 DVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGGP----------- 163
+ K+++ V V+ P + ++ W+ + + KV++ +
Sbjct: 830 NPLKLWKASVEVEAPPSVVLNRVLRERHL---WDEDFVQWKVVETLDRQTEIYQYVLNSM 886
Query: 164 -----RDFVSVRCAKRR--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSP 216
RDFV +R K C L ++ + + G +RA + ++ P
Sbjct: 887 APHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGSG- 944
Query: 217 SKTKLTWLLSIDLKGWLPK 235
K++LT + IDLKG P+
Sbjct: 945 -KSRLTHICRIDLKGHSPE 962
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 29.3 bits (64), Expect = 3.8
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 59 LGSRLEETLYSDQE-LAYLQQG--EEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP- 114
LG++LEE+ + L +L QG +EA +K +GW S DN D KV
Sbjct: 895 LGTQLEESGATFHTYLNHLIQGLQKEAKEKF-------KGWVTCSSTDNTDLAFKKVGDG 947
Query: 115 DVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGGP----------- 163
+ K+++ V V+ P + ++ W+ + + KV++ +
Sbjct: 948 NPLKLWKASVEVEAPPSVVLNRVLRERHL---WDEDFVQWKVVETLDRQTEIYQYVLNSM 1004
Query: 164 -----RDFVSVRCAKRR--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSP 216
RDFV +R K C L ++ + + G +RA + ++ P
Sbjct: 1005 APHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGSG- 1062
Query: 217 SKTKLTWLLSIDLKGWLPK 235
K++LT + IDLKG P+
Sbjct: 1063 -KSRLTHICRIDLKGHSPE 1080
>gi|189027048 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]
Length = 643
Score = 28.9 bits (63), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 62 RLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKK 98
R EE L DQ+L +LQQ + MQ+ L + + KK
Sbjct: 459 RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKK 495
>gi|189027046 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]
Length = 643
Score = 28.9 bits (63), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 62 RLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKK 98
R EE L DQ+L +LQQ + MQ+ L + + KK
Sbjct: 459 RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKK 495
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 28.5 bits (62), Expect = 6.4
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 33 QELNRRALGGPTPSTWINQVRRRSSLLGSRLEETLY------SDQELAYLQQGEEAMQKA 86
+E RR LG + + RR ++L E+ + SD+ + L+Q E ++K
Sbjct: 151 KESYRRILG----QLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKK- 205
Query: 87 LGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGE 146
L +QE +E ++ +K ++ + ++ K+ ++V +RL +L + + + E
Sbjct: 206 ---LIDQEIKSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQE 262
Query: 147 WNPNVKE 153
N KE
Sbjct: 263 LTTNAKE 269
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 28.5 bits (62), Expect = 6.4
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 33 QELNRRALGGPTPSTWINQVRRRSSLLGSRLEETLY------SDQELAYLQQGEEAMQKA 86
+E RR LG + + RR ++L E+ + SD+ + L+Q E ++K
Sbjct: 151 KESYRRILG----QLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKK- 205
Query: 87 LGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGE 146
L +QE +E ++ +K ++ + ++ K+ ++V +RL +L + + + E
Sbjct: 206 ---LIDQEIKSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQE 262
Query: 147 WNPNVKE 153
N KE
Sbjct: 263 LTTNAKE 269
>gi|28827795 chromatin modifying protein 4B [Homo sapiens]
Length = 224
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 41 GGPTPSTWINQVRRRSSLLGSRLE--ETLYSDQELAYLQQGEEAMQKALGILSNQEGWKK 98
GGPTP I ++R +L + E E + A + G + + AL L ++ ++K
Sbjct: 18 GGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKRAALQALKRKKRYEK 77
Query: 99 ESQQDNG 105
+ Q +G
Sbjct: 78 QLAQIDG 84
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,127,872
Number of Sequences: 37866
Number of extensions: 436269
Number of successful extensions: 1111
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1100
Number of HSP's gapped (non-prelim): 21
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.