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Name: SUMO2 Sequence: fasta or formatted (95aa) NCBI GI: 54792069
Description:

SMT3 suppressor of mif two 3 homolog 2 isoform a precursor

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [71aa] SMT3 suppressor of mif two 3 homolog 2 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          4           1
 C cysteine            1.1          1           1
 D aspartate           8.4          8           1
 E glutamate           8.4          8           1
 F phenylalanine       4.2          4           1
 G glycine             7.4          7           2
 H histidine           2.1          2           1
 I isoleucine          5.3          5           1
 K lysine              8.4          8           1
 L leucine             5.3          5           1
 M methionine          4.2          4           1
 N asparagine          4.2          4           2
 P proline             4.2          4           1
 Q glutamine           9.5          9           3
 R arginine            5.3          5           1
 S serine              3.2          3           1
 T threonine           6.3          6           1
 V valine              6.3          6           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SMT3 suppressor of mif two 3 homolog 2 isoform a pre... 
SUMO3                 0.924   small ubiquitin-like modifier protein 3 
SUMO4                 0.813   SMT3 suppressor of mif two 3 homolog 4 
SUMO2                 0.637   SMT3 suppressor of mif two 3 homolog 2 isoform b pre...
LOC100294361          0.550   PREDICTED: similar to SMT3 suppressor of mif two 3 ...
LOC100289514          0.550   PREDICTED: hypothetical protein XP_002342366 
LOC100130966          0.503   PREDICTED: similar to SMT3 supressor of mif two 3 h...
LOC100293325          0.474   PREDICTED: similar to Small ubiquitin-related modif...
LOC100290246          0.474   PREDICTED: hypothetical protein XP_002346995 
LOC100288889          0.474   PREDICTED: hypothetical protein XP_002342830 
LOC100288889          0.474   PREDICTED: similar to Small ubiquitin-related modif...
LOC100127922          0.450   PREDICTED: similar to mCG21560 
LOC100127922          0.450   PREDICTED: similar to mCG21560 
LOC100127922          0.450   PREDICTED: similar to mCG21560 
SUMO1                 0.398   SMT3 suppressor of mif two 3 homolog 1 isoform a pre...
SUMO1                 0.398   SMT3 suppressor of mif two 3 homolog 1 isoform a prec...
SUMO1                 0.333   SMT3 suppressor of mif two 3 homolog 1 isoform b pre...
NFATC2IP              0.164   nuclear factor of activated T-cells, cytoplasmic, ca...
COPA                  0.029   coatomer protein complex, subunit alpha isoform 1 [...
COPA                  0.029   coatomer protein complex, subunit alpha isoform 2 [...
HMCN1                 0.018   hemicentin 1 
SPZ1                  0.012   spermatogenic leucine zipper 1 
GAB3                  0.012   Gab3 protein isoform 1 
GAB3                  0.012   Gab3 protein isoform 2 
PARK2                 0.006   parkin isoform 2 
PARK2                 0.006   parkin isoform 1 
HEYL                  0.006   hairy/enhancer-of-split related with YRPW motif-like ...
OASL                  0.006   2'-5'-oligoadenylate synthetase-like isoform a [Homo...
C20orf194             0.006   hypothetical protein LOC25943 
PIGO                  0.006   phosphatidylinositol glycan anchor biosynthesis, cla...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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