LOC100294361 19457

Name: LOC100294361	Sequence: fasta or formatted (206aa)		NCBI GI: 239748082
Description: PREDICTED: similar to SMT3 suppressor of mif two 3 homolog 2		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 17 2 C cysteine 2.9 6 1 D aspartate 3.4 7 1 E glutamate 6.3 13 1 F phenylalanine 2.4 5 1 G glycine 4.4 9 2 H histidine 4.4 9 1 I isoleucine 4.4 9 1 K lysine 9.2 19 2 L leucine 7.8 16 2 M methionine 2.4 5 1 N asparagine 1.9 4 1 P proline 6.8 14 3 Q glutamine 5.3 11 3 R arginine 3.4 7 1 S serine 7.8 16 1 T threonine 8.7 18 2 V valine 7.8 16 2 W tryptophan 1.0 2 1 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to SMT3 suppressor of mif two 3 ... LOC100289514 0.624 PREDICTED: hypothetical protein XP_002342366 SUMO2 0.254 SMT3 suppressor of mif two 3 homolog 2 isoform b pre... SUMO2 0.239 SMT3 suppressor of mif two 3 homolog 2 isoform a pre... SUMO3 0.213 small ubiquitin-like modifier protein 3 LOC100130966 0.211 PREDICTED: similar to SMT3 supressor of mif two 3 h... SUMO4 0.195 SMT3 suppressor of mif two 3 homolog 4 LOC100293325 0.195 PREDICTED: similar to Small ubiquitin-related modif... LOC100290246 0.195 PREDICTED: hypothetical protein XP_002346995 LOC100288889 0.195 PREDICTED: hypothetical protein XP_002342830 LOC100288889 0.195 PREDICTED: similar to Small ubiquitin-related modif... LOC100127922 0.165 PREDICTED: similar to mCG21560 LOC100127922 0.165 PREDICTED: similar to mCG21560 LOC100127922 0.165 PREDICTED: similar to mCG21560 SUMO1 0.056 SMT3 suppressor of mif two 3 homolog 1 isoform a pre... SUMO1 0.056 SMT3 suppressor of mif two 3 homolog 1 isoform a prec... SUMO1 0.030 SMT3 suppressor of mif two 3 homolog 1 isoform b pre... COPA 0.020 coatomer protein complex, subunit alpha isoform 1 [... COPA 0.020 coatomer protein complex, subunit alpha isoform 2 [... ADRA1A 0.018 alpha-1A-adrenergic receptor isoform 4 ADRA1A 0.018 alpha-1A-adrenergic receptor isoform 1 ADRA1A 0.018 alpha-1A-adrenergic receptor isoform 2 ADRA1A 0.018 alpha-1A-adrenergic receptor isoform 3 AHDC1 0.015 AT hook, DNA binding motif, containing 1 ATP2B4 0.013 plasma membrane calcium ATPase 4 isoform 4a ATP2B4 0.013 plasma membrane calcium ATPase 4 isoform 4b MYO18A 0.013 myosin 18A isoform b MYO18A 0.013 myosin 18A isoform a GLI2 0.010 GLI-Kruppel family member GLI2 SNCAIP 0.010 synuclein alpha interacting protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.