Search of human proteins with 54792069

Search of human proteins with 54792069

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|54792069 SMT3 suppressor of mif two 3 homolog 2 isoform a
precursor [Homo sapiens]
         (95 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|54792069 SMT3 suppressor of mif two 3 homolog 2 isoform a pre...   196   4e-51
gi|48928058 small ubiquitin-like modifier protein 3 [Homo sapiens]    183   2e-47
gi|50400081 SMT3 suppressor of mif two 3 homolog 4 [Homo sapiens]     164   1e-41
gi|54792071 SMT3 suppressor of mif two 3 homolog 2 isoform b pre...   134   2e-32
gi|239748082 PREDICTED: similar to SMT3 suppressor of mif two 3 ...   119   4e-28
gi|239741979 PREDICTED: hypothetical protein XP_002342366 [Homo ...   119   4e-28
gi|169169820 PREDICTED: similar to SMT3 supressor of mif two 3 h...   111   1e-25
gi|239754793 PREDICTED: similar to Small ubiquitin-related modif...   106   3e-24
gi|239749320 PREDICTED: hypothetical protein XP_002346995 [Homo ...   106   3e-24
gi|239743410 PREDICTED: hypothetical protein XP_002342830 [Homo ...   106   3e-24
gi|239509111 PREDICTED: similar to Small ubiquitin-related modif...   106   3e-24
gi|239754164 PREDICTED: similar to mCG21560 [Homo sapiens]            102   9e-23
gi|239748701 PREDICTED: similar to mCG21560 [Homo sapiens]            102   9e-23
gi|239742728 PREDICTED: similar to mCG21560 [Homo sapiens]            102   9e-23
gi|54792065 SMT3 suppressor of mif two 3 homolog 1 isoform a pre...    93   5e-20
gi|4507801 SMT3 suppressor of mif two 3 homolog 1 isoform a prec...    93   5e-20
gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b pre...    82   1e-16
gi|46447823 nuclear factor of activated T-cells, cytoplasmic, ca...    53   6e-08
gi|148536855 coatomer protein complex, subunit alpha isoform 1 [...    30   0.32 
gi|148536853 coatomer protein complex, subunit alpha isoform 2 [...    30   0.32 
gi|118572606 hemicentin 1 [Homo sapiens]                               28   1.2  
gi|229608967 spermatogenic leucine zipper 1 [Homo sapiens]             27   2.7  
gi|126091130 Gab3 protein isoform 1 [Homo sapiens]                     27   2.7  
gi|18079323 Gab3 protein isoform 2 [Homo sapiens]                      27   2.7  
gi|169790971 parkin isoform 2 [Homo sapiens]                           26   6.0  
gi|169790969 parkin isoform 1 [Homo sapiens]                           26   6.0  
gi|7657154 hairy/enhancer-of-split related with YRPW motif-like ...    26   7.8  
gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo...    26   7.8  
gi|149363695 hypothetical protein LOC25943 [Homo sapiens]              26   7.8  
gi|38045917 phosphatidylinositol glycan anchor biosynthesis, cla...    26   7.8  

>gi|54792069 SMT3 suppressor of mif two 3 homolog 2 isoform a
          precursor [Homo sapiens]
          Length = 95

 Score =  196 bits (497), Expect = 4e-51
 Identities = 95/95 (100%), Positives = 95/95 (100%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF
Sbjct: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95
          RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY
Sbjct: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95


>gi|48928058 small ubiquitin-like modifier protein 3 [Homo
          sapiens]
          Length = 103

 Score =  183 bits (465), Expect = 2e-47
 Identities = 91/94 (96%), Positives = 93/94 (98%), Gaps = 1/94 (1%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          M++EKPKEGVKTEN DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF
Sbjct: 1  MSEEKPKEGVKTEN-DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 59

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 94
          RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV
Sbjct: 60 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93


>gi|50400081 SMT3 suppressor of mif two 3 homolog 4 [Homo sapiens]
          Length = 95

 Score =  164 bits (416), Expect = 1e-41
 Identities = 81/95 (85%), Positives = 87/95 (91%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MA+EKP E VKTENN+HINLKVAGQDGSVVQFKIKR TPLSKLMKAYCE +GLS++QIRF
Sbjct: 1  MANEKPTEEVKTENNNHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRF 60

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95
          RF GQPI+ TD PAQLEMEDEDTIDVFQQ TGGVY
Sbjct: 61 RFGGQPISGTDKPAQLEMEDEDTIDVFQQPTGGVY 95


>gi|54792071 SMT3 suppressor of mif two 3 homolog 2 isoform b
          precursor [Homo sapiens]
          Length = 71

 Score =  134 bits (336), Expect = 2e-32
 Identities = 71/95 (74%), Positives = 71/95 (74%), Gaps = 24/95 (25%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCER          
Sbjct: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCER---------- 50

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95
                        QLEMEDEDTIDVFQQQTGGVY
Sbjct: 51 --------------QLEMEDEDTIDVFQQQTGGVY 71


>gi|239748082 PREDICTED: similar to SMT3 suppressor of mif two 3
           homolog 2 [Homo sapiens]
          Length = 206

 Score =  119 bits (299), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 69/95 (72%), Gaps = 24/95 (25%)

Query: 1   MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
           +ADEKPKEG++TEN DHINLKVAGQ+GSVVQF+IKRHTPLSKLMKAY             
Sbjct: 136 VADEKPKEGIETENKDHINLKVAGQEGSVVQFRIKRHTPLSKLMKAY------------- 182

Query: 61  RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95
                      TPAQLEMEDEDT D+FQQQ+GGVY
Sbjct: 183 -----------TPAQLEMEDEDTTDMFQQQSGGVY 206


>gi|239741979 PREDICTED: hypothetical protein XP_002342366 [Homo
           sapiens]
          Length = 164

 Score =  119 bits (299), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 69/95 (72%), Gaps = 24/95 (25%)

Query: 1   MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
           +ADEKPKEG++TEN DHINLKVAGQ+GSVVQF+IKRHTPLSKLMKAY             
Sbjct: 94  VADEKPKEGIETENKDHINLKVAGQEGSVVQFRIKRHTPLSKLMKAY------------- 140

Query: 61  RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95
                      TPAQLEMEDEDT D+FQQQ+GGVY
Sbjct: 141 -----------TPAQLEMEDEDTTDMFQQQSGGVY 164


>gi|169169820 PREDICTED: similar to SMT3 supressor of mif two 3
          homolog 2 [Homo sapiens]
          Length = 70

 Score =  111 bits (278), Expect = 1e-25
 Identities = 62/95 (65%), Positives = 66/95 (69%), Gaps = 25/95 (26%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MAD+KP+EGVKT+NN HINLKV GQ GSVVQFKIKRHTPLSKLMKAYCE           
Sbjct: 1  MADKKPQEGVKTKNN-HINLKVVGQGGSVVQFKIKRHTPLSKLMKAYCE----------- 48

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY 95
                        QLEME+EDTIDVFQQQ GGVY
Sbjct: 49 -------------LQLEMENEDTIDVFQQQMGGVY 70


>gi|239754793 PREDICTED: similar to Small ubiquitin-related
          modifier 2 [Homo sapiens]
          Length = 103

 Score =  106 bits (265), Expect = 3e-24
 Identities = 58/92 (63%), Positives = 61/92 (66%), Gaps = 24/92 (26%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MA++   EGVKTENNDHINLKV GQD SVVQFKIKRHTPLSKLM AYC+           
Sbjct: 1  MANKNSNEGVKTENNDHINLKVVGQDDSVVQFKIKRHTPLSKLMNAYCD----------- 49

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTG 92
                       AQLEMEDE TIDVFQQQTG
Sbjct: 50 -------------AQLEMEDEGTIDVFQQQTG 68


>gi|239749320 PREDICTED: hypothetical protein XP_002346995 [Homo
          sapiens]
          Length = 103

 Score =  106 bits (265), Expect = 3e-24
 Identities = 58/92 (63%), Positives = 61/92 (66%), Gaps = 24/92 (26%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MA++   EGVKTENNDHINLKV GQD SVVQFKIKRHTPLSKLM AYC+           
Sbjct: 1  MANKNSNEGVKTENNDHINLKVVGQDDSVVQFKIKRHTPLSKLMNAYCD----------- 49

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTG 92
                       AQLEMEDE TIDVFQQQTG
Sbjct: 50 -------------AQLEMEDEGTIDVFQQQTG 68


>gi|239743410 PREDICTED: hypothetical protein XP_002342830 [Homo
          sapiens]
          Length = 103

 Score =  106 bits (265), Expect = 3e-24
 Identities = 58/92 (63%), Positives = 61/92 (66%), Gaps = 24/92 (26%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MA++   EGVKTENNDHINLKV GQD SVVQFKIKRHTPLSKLM AYC+           
Sbjct: 1  MANKNSNEGVKTENNDHINLKVVGQDDSVVQFKIKRHTPLSKLMNAYCD----------- 49

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTG 92
                       AQLEMEDE TIDVFQQQTG
Sbjct: 50 -------------AQLEMEDEGTIDVFQQQTG 68


>gi|239509111 PREDICTED: similar to Small ubiquitin-related
          modifier 2 [Homo sapiens]
          Length = 103

 Score =  106 bits (265), Expect = 3e-24
 Identities = 58/92 (63%), Positives = 61/92 (66%), Gaps = 24/92 (26%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 60
          MA++   EGVKTENNDHINLKV GQD SVVQFKIKRHTPLSKLM AYC+           
Sbjct: 1  MANKNSNEGVKTENNDHINLKVVGQDDSVVQFKIKRHTPLSKLMNAYCD----------- 49

Query: 61 RFDGQPINETDTPAQLEMEDEDTIDVFQQQTG 92
                       AQLEMEDE TIDVFQQQTG
Sbjct: 50 -------------AQLEMEDEGTIDVFQQQTG 68


>gi|239754164 PREDICTED: similar to mCG21560 [Homo sapiens]
          Length = 93

 Score =  102 bits (253), Expect = 9e-23
 Identities = 48/49 (97%), Positives = 48/49 (97%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCE 49
          MADEKPKEGVKTENNDHINLKVAGQDGSV QFKIKRHTPLSKLMKAYCE
Sbjct: 45 MADEKPKEGVKTENNDHINLKVAGQDGSVAQFKIKRHTPLSKLMKAYCE 93


>gi|239748701 PREDICTED: similar to mCG21560 [Homo sapiens]
          Length = 93

 Score =  102 bits (253), Expect = 9e-23
 Identities = 48/49 (97%), Positives = 48/49 (97%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCE 49
          MADEKPKEGVKTENNDHINLKVAGQDGSV QFKIKRHTPLSKLMKAYCE
Sbjct: 45 MADEKPKEGVKTENNDHINLKVAGQDGSVAQFKIKRHTPLSKLMKAYCE 93


>gi|239742728 PREDICTED: similar to mCG21560 [Homo sapiens]
          Length = 93

 Score =  102 bits (253), Expect = 9e-23
 Identities = 48/49 (97%), Positives = 48/49 (97%)

Query: 1  MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCE 49
          MADEKPKEGVKTENNDHINLKVAGQDGSV QFKIKRHTPLSKLMKAYCE
Sbjct: 45 MADEKPKEGVKTENNDHINLKVAGQDGSVAQFKIKRHTPLSKLMKAYCE 93


>gi|54792065 SMT3 suppressor of mif two 3 homolog 1 isoform a
          precursor [Homo sapiens]
          Length = 101

 Score = 92.8 bits (229), Expect = 5e-20
 Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 4/97 (4%)

Query: 1  MADEKPKEGVKT----ENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMR 56
          M+D++ K   +     +  ++I LKV GQD S + FK+K  T L KL ++YC+RQG+ M 
Sbjct: 1  MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 60

Query: 57 QIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
           +RF F+GQ I +  TP +L ME+ED I+V+Q+QTGG
Sbjct: 61 SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97


>gi|4507801 SMT3 suppressor of mif two 3 homolog 1 isoform a
          precursor [Homo sapiens]
          Length = 101

 Score = 92.8 bits (229), Expect = 5e-20
 Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 4/97 (4%)

Query: 1  MADEKPKEGVKT----ENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMR 56
          M+D++ K   +     +  ++I LKV GQD S + FK+K  T L KL ++YC+RQG+ M 
Sbjct: 1  MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 60

Query: 57 QIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 93
           +RF F+GQ I +  TP +L ME+ED I+V+Q+QTGG
Sbjct: 61 SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 97


>gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b
          precursor [Homo sapiens]
          Length = 76

 Score = 81.6 bits (200), Expect = 1e-16
 Identities = 36/72 (50%), Positives = 52/72 (72%)

Query: 22 VAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDE 81
          ++ QD S + FK+K  T L KL ++YC+RQG+ M  +RF F+GQ I +  TP +L ME+E
Sbjct: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60

Query: 82 DTIDVFQQQTGG 93
          D I+V+Q+QTGG
Sbjct: 61 DVIEVYQEQTGG 72


>gi|46447823 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein [Homo
           sapiens]
          Length = 419

 Score = 52.8 bits (125), Expect = 6e-08
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 12  TENNDHINLKVAGQDG-SVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINET 70
           TE +  + L+V G++    ++  + R +PL  LM  Y E  GLS R++ F FDG  ++  
Sbjct: 342 TETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGTKLSGR 401

Query: 71  DTPAQLEMEDEDTIDVF 87
           + PA L ME  D I+V+
Sbjct: 402 ELPADLGMESGDLIEVW 418


>gi|148536855 coatomer protein complex, subunit alpha isoform 1
           [Homo sapiens]
          Length = 1233

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)

Query: 3   DEKPKEGVKTENNDH-----------INLKVAGQDGSVVQFKIKRHTP 39
           D   + GV+T   DH           +NL  AG DG ++ FK++R  P
Sbjct: 277 DMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERP 324


>gi|148536853 coatomer protein complex, subunit alpha isoform 2
           [Homo sapiens]
          Length = 1224

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)

Query: 3   DEKPKEGVKTENNDH-----------INLKVAGQDGSVVQFKIKRHTP 39
           D   + GV+T   DH           +NL  AG DG ++ FK++R  P
Sbjct: 277 DMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERP 324


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 40   LSKLMKAYCERQGLSMRQIRFRFDGQPI 67
            ++ L+K  CE +GL M  I +  DGQPI
Sbjct: 1561 INSLIKLECETRGLPMPAITWYKDGQPI 1588


>gi|229608967 spermatogenic leucine zipper 1 [Homo sapiens]
          Length = 430

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 35  KRHTPLSKLMKAYCERQ---GLSMRQIRFRFDGQPINETDTPAQLE 77
           K+HT LSKL+K+Y + Q     ++      F  QP NE     +LE
Sbjct: 259 KQHTELSKLIKSYQKSQKDISETLGNNGVGFQTQPNNEVSAKHELE 304


>gi|126091130 Gab3 protein isoform 1 [Homo sapiens]
          Length = 587

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 3   DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRF 62
           D KP+   +    D  NL +  +  S+ +    R  P S+      ER G++      RF
Sbjct: 442 DLKPQRKSRPPPLDLRNLSIIREHASLTR---TRTVPCSRTSFLSPERNGINSA----RF 494

Query: 63  DGQPINETDTPAQLEMEDEDT 83
              P++  D  + +EME+  T
Sbjct: 495 FANPVSREDEESYIEMEEHRT 515


>gi|18079323 Gab3 protein isoform 2 [Homo sapiens]
          Length = 586

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 3   DEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRF 62
           D KP+   +    D  NL +  +  S+ +    R  P S+      ER G++      RF
Sbjct: 441 DLKPQRKSRPPPLDLRNLSIIREHASLTR---TRTVPCSRTSFLSPERNGINSA----RF 493

Query: 63  DGQPINETDTPAQLEMEDEDT 83
              P++  D  + +EME+  T
Sbjct: 494 FANPVSREDEESYIEMEEHRT 514


>gi|169790971 parkin isoform 2 [Homo sapiens]
          Length = 437

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 11/57 (19%), Positives = 28/57 (49%)

Query: 33 KIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQ 89
          ++   T + +L +   +RQG+   Q+R  F G+ +    T    +++ +  + + Q+
Sbjct: 16 EVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCDLDQQSIVHIVQR 72


>gi|169790969 parkin isoform 1 [Homo sapiens]
          Length = 465

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 11/57 (19%), Positives = 28/57 (49%)

Query: 33 KIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQ 89
          ++   T + +L +   +RQG+   Q+R  F G+ +    T    +++ +  + + Q+
Sbjct: 16 EVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCDLDQQSIVHIVQR 72


>gi|7657154 hairy/enhancer-of-split related with YRPW motif-like
          [Homo sapiens]
          Length = 328

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 4  EKPKE--GVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFR 61
          ++PKE  G   E++  I++   GQ+G + Q      TP S  M+A  +R+G+  ++ R R
Sbjct: 2  KRPKEPSGSDGESDGPIDV---GQEGQLSQMARPLSTPSSSQMQARKKRRGIIEKRRRDR 58

Query: 62 FD 63
           +
Sbjct: 59 IN 60


>gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo
           sapiens]
          Length = 514

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 16/67 (23%), Positives = 31/67 (46%)

Query: 18  INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLE 77
           I + V   DG    + I  ++ +  L +   ++QGL  +Q +  F GQ + +        
Sbjct: 434 IQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQGQVLQDWLGLGIYG 493

Query: 78  MEDEDTI 84
           ++D DT+
Sbjct: 494 IQDSDTL 500


>gi|149363695 hypothetical protein LOC25943 [Homo sapiens]
          Length = 1177

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 11  KTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQG 52
           K ++N  I+LKV  +DG  V+ K + H+   KL  A  +  G
Sbjct: 649 KQQDNSGISLKVIQEDGLSVEQK-RLHSSAQKLFSALSQPAG 689


>gi|38045917 phosphatidylinositol glycan anchor biosynthesis, class
           O isoform 2 [Homo sapiens]
          Length = 672

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 39  PLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDV 86
           PL  L    CE QGL  RQ        P NE D   + E E+E  +++
Sbjct: 538 PLLLLWPFLCESQGLRKRQ------QPPGNEADARVRPEEEEEPLMEM 579


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,566,282
Number of Sequences: 37866
Number of extensions: 128893
Number of successful extensions: 272
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 34
length of query: 95
length of database: 18,247,518
effective HSP length: 66
effective length of query: 29
effective length of database: 15,748,362
effective search space: 456702498
effective search space used: 456702498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.