LOC100288889 17614

Name: LOC100288889	Sequence: fasta or formatted (103aa)		NCBI GI: 239743410
Description: PREDICTED: hypothetical protein XP_002342830		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [103aa] PREDICTED: similar to Small ubiquitin-related modifier 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 5 2 C cysteine 1.9 2 1 D aspartate 5.8 6 2 E glutamate 6.8 7 1 F phenylalanine 5.8 6 2 G glycine 4.9 5 1 H histidine 1.9 2 1 I isoleucine 2.9 3 1 K lysine 8.7 9 1 L leucine 6.8 7 1 M methionine 3.9 4 1 N asparagine 6.8 7 2 P proline 2.9 3 2 Q glutamine 7.8 8 3 R arginine 1.9 2 1 S serine 7.8 8 1 T threonine 8.7 9 2 V valine 7.8 8 2 W tryptophan 0.0 0 0 Y tyrosine 1.9 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342830 LOC100293325 0.984 PREDICTED: similar to Small ubiquitin-related modif... LOC100290246 0.984 PREDICTED: hypothetical protein XP_002346995 LOC100288889 0.984 PREDICTED: similar to Small ubiquitin-related modif... SUMO2 0.505 SMT3 suppressor of mif two 3 homolog 2 isoform b pre... SUMO2 0.440 SMT3 suppressor of mif two 3 homolog 2 isoform a pre... LOC100130966 0.435 PREDICTED: similar to SMT3 supressor of mif two 3 h... LOC100294361 0.418 PREDICTED: similar to SMT3 suppressor of mif two 3 ... LOC100289514 0.418 PREDICTED: hypothetical protein XP_002342366 SUMO4 0.397 SMT3 suppressor of mif two 3 homolog 4 SUMO3 0.397 small ubiquitin-like modifier protein 3 LOC100127922 0.321 PREDICTED: similar to mCG21560 LOC100127922 0.321 PREDICTED: similar to mCG21560 LOC100127922 0.321 PREDICTED: similar to mCG21560 SUMO1 0.136 SMT3 suppressor of mif two 3 homolog 1 isoform a pre... SUMO1 0.136 SMT3 suppressor of mif two 3 homolog 1 isoform a prec... SUMO1 0.071 SMT3 suppressor of mif two 3 homolog 1 isoform b pre... LEO1 0.022 Leo1, Paf1/RNA polymerase II complex component, homo... ADAMTS2 0.016 ADAM metallopeptidase with thrombospondin type 1 mot... ADAMTS2 0.016 ADAM metallopeptidase with thrombospondin type 1 mo... FARP1 0.011 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... SPTBN5 0.011 spectrin, beta, non-erythrocytic 5 RHPN2 0.005 rhophilin, Rho GTPase binding protein 2 ITIH1 0.005 inter-alpha (globulin) inhibitor H1 KIF20B 0.005 M-phase phosphoprotein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.