Search of human proteins with 54792067

Search of human proteins with 54792067

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b
precursor [Homo sapiens]
         (76 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b pre...   157   1e-39
gi|54792065 SMT3 suppressor of mif two 3 homolog 1 isoform a pre...   152   7e-38
gi|4507801 SMT3 suppressor of mif two 3 homolog 1 isoform a prec...   152   7e-38
gi|54792069 SMT3 suppressor of mif two 3 homolog 2 isoform a pre...    82   1e-16
gi|48928058 small ubiquitin-like modifier protein 3 [Homo sapiens]     82   1e-16
gi|50400081 SMT3 suppressor of mif two 3 homolog 4 [Homo sapiens]      70   4e-13
gi|54792071 SMT3 suppressor of mif two 3 homolog 2 isoform b pre...    47   3e-06
gi|169790971 parkin isoform 2 [Homo sapiens]                           40   5e-04
gi|169790969 parkin isoform 1 [Homo sapiens]                           40   5e-04
gi|46447823 nuclear factor of activated T-cells, cytoplasmic, ca...    39   7e-04
gi|239754793 PREDICTED: similar to Small ubiquitin-related modif...    38   0.002
gi|169169820 PREDICTED: similar to SMT3 supressor of mif two 3 h...    38   0.002
gi|239749320 PREDICTED: hypothetical protein XP_002346995 [Homo ...    38   0.002
gi|239743410 PREDICTED: hypothetical protein XP_002342830 [Homo ...    38   0.002
gi|239509111 PREDICTED: similar to Small ubiquitin-related modif...    38   0.002
gi|239748082 PREDICTED: similar to SMT3 suppressor of mif two 3 ...    37   0.004
gi|239741979 PREDICTED: hypothetical protein XP_002342366 [Homo ...    37   0.004
gi|223972685 IQ motif and ubiquitin domain containing [Homo sapi...    35   0.013
gi|169790973 parkin isoform 3 [Homo sapiens]                           34   0.022
gi|67191208 ubiquitin C [Homo sapiens]                                 33   0.050
gi|11024714 ubiquitin B precursor [Homo sapiens]                       33   0.065
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom...    33   0.065
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ...    33   0.065
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s...    33   0.065
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ...    33   0.065
gi|5453760 neural precursor cell expressed, developmentally down...    32   0.11 
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]           30   0.42 
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]           30   0.42 
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]           30   0.42 
gi|239754164 PREDICTED: similar to mCG21560 [Homo sapiens]             29   0.72 

>gi|54792067 SMT3 suppressor of mif two 3 homolog 1 isoform b
          precursor [Homo sapiens]
          Length = 76

 Score =  157 bits (398), Expect = 1e-39
 Identities = 76/76 (100%), Positives = 76/76 (100%)

Query: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
          MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE
Sbjct: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60

Query: 61 DVIEVYQEQTGGHSTV 76
          DVIEVYQEQTGGHSTV
Sbjct: 61 DVIEVYQEQTGGHSTV 76


>gi|54792065 SMT3 suppressor of mif two 3 homolog 1 isoform a
           precursor [Homo sapiens]
          Length = 101

 Score =  152 bits (383), Expect = 7e-38
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 4   QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
           QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI
Sbjct: 29  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 88

Query: 64  EVYQEQTGGHSTV 76
           EVYQEQTGGHSTV
Sbjct: 89  EVYQEQTGGHSTV 101


>gi|4507801 SMT3 suppressor of mif two 3 homolog 1 isoform a
           precursor [Homo sapiens]
          Length = 101

 Score =  152 bits (383), Expect = 7e-38
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 4   QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
           QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI
Sbjct: 29  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 88

Query: 64  EVYQEQTGGHSTV 76
           EVYQEQTGGHSTV
Sbjct: 89  EVYQEQTGGHSTV 101


>gi|54792069 SMT3 suppressor of mif two 3 homolog 2 isoform a
          precursor [Homo sapiens]
          Length = 95

 Score = 81.6 bits (200), Expect = 1e-16
 Identities = 36/72 (50%), Positives = 52/72 (72%)

Query: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
          ++ QD S + FK+K  T L KL ++YC+RQG+ M  +RF F+GQ I +  TP +L ME+E
Sbjct: 22 VAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDE 81

Query: 61 DVIEVYQEQTGG 72
          D I+V+Q+QTGG
Sbjct: 82 DTIDVFQQQTGG 93


>gi|48928058 small ubiquitin-like modifier protein 3 [Homo
          sapiens]
          Length = 103

 Score = 81.6 bits (200), Expect = 1e-16
 Identities = 36/72 (50%), Positives = 52/72 (72%)

Query: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
          ++ QD S + FK+K  T L KL ++YC+RQG+ M  +RF F+GQ I +  TP +L ME+E
Sbjct: 21 VAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDE 80

Query: 61 DVIEVYQEQTGG 72
          D I+V+Q+QTGG
Sbjct: 81 DTIDVFQQQTGG 92


>gi|50400081 SMT3 suppressor of mif two 3 homolog 4 [Homo sapiens]
          Length = 95

 Score = 70.1 bits (170), Expect = 4e-13
 Identities = 31/72 (43%), Positives = 48/72 (66%)

Query: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
          ++ QD S + FK+K  T L KL ++YC+ +G+ +  +RF F GQ I+    P +L ME+E
Sbjct: 22 VAGQDGSVVQFKIKRQTPLSKLMKAYCEPRGLSVKQIRFRFGGQPISGTDKPAQLEMEDE 81

Query: 61 DVIEVYQEQTGG 72
          D I+V+Q+ TGG
Sbjct: 82 DTIDVFQQPTGG 93


>gi|54792071 SMT3 suppressor of mif two 3 homolog 2 isoform b
          precursor [Homo sapiens]
          Length = 71

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 24/72 (33%)

Query: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
          ++ QD S + FK+K  T L KL ++YC+RQ                        L ME+E
Sbjct: 22 VAGQDGSVVQFKIKRHTPLSKLMKAYCERQ------------------------LEMEDE 57

Query: 61 DVIEVYQEQTGG 72
          D I+V+Q+QTGG
Sbjct: 58 DTIDVFQQQTGG 69


>gi|169790971 parkin isoform 2 [Homo sapiens]
          Length = 437

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 16/56 (28%), Positives = 34/56 (60%)

Query: 12 KVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQ 67
          +V   T + +LKE   +RQGVP + LR +F G+ + ++ T +   ++++ ++ + Q
Sbjct: 16 EVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCDLDQQSIVHIVQ 71


>gi|169790969 parkin isoform 1 [Homo sapiens]
          Length = 465

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 16/56 (28%), Positives = 34/56 (60%)

Query: 12 KVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQ 67
          +V   T + +LKE   +RQGVP + LR +F G+ + ++ T +   ++++ ++ + Q
Sbjct: 16 EVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCDLDQQSIVHIVQ 71


>gi|46447823 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 interacting protein [Homo
           sapiens]
          Length = 419

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 19  LKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVY 66
           LK L   Y +  G+    L F F+G +++    P +LGME  D+IEV+
Sbjct: 371 LKTLMSHYEEAMGLSGRKLSFFFDGTKLSGRELPADLGMESGDLIEVW 418


>gi|239754793 PREDICTED: similar to Small ubiquitin-related
          modifier 2 [Homo sapiens]
          Length = 103

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 24/68 (35%)

Query: 4  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
          QD S + FK+K  T L KL  +YC  Q                        L ME+E  I
Sbjct: 25 QDDSVVQFKIKRHTPLSKLMNAYCDAQ------------------------LEMEDEGTI 60

Query: 64 EVYQEQTG 71
          +V+Q+QTG
Sbjct: 61 DVFQQQTG 68


>gi|169169820 PREDICTED: similar to SMT3 supressor of mif two 3
          homolog 2 [Homo sapiens]
          Length = 70

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 24/69 (34%)

Query: 4  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
          Q  S + FK+K  T L KL ++YC+ Q                        L ME ED I
Sbjct: 24 QGGSVVQFKIKRHTPLSKLMKAYCELQ------------------------LEMENEDTI 59

Query: 64 EVYQEQTGG 72
          +V+Q+Q GG
Sbjct: 60 DVFQQQMGG 68


>gi|239749320 PREDICTED: hypothetical protein XP_002346995 [Homo
          sapiens]
          Length = 103

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 24/68 (35%)

Query: 4  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
          QD S + FK+K  T L KL  +YC  Q                        L ME+E  I
Sbjct: 25 QDDSVVQFKIKRHTPLSKLMNAYCDAQ------------------------LEMEDEGTI 60

Query: 64 EVYQEQTG 71
          +V+Q+QTG
Sbjct: 61 DVFQQQTG 68


>gi|239743410 PREDICTED: hypothetical protein XP_002342830 [Homo
          sapiens]
          Length = 103

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 24/68 (35%)

Query: 4  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
          QD S + FK+K  T L KL  +YC  Q                        L ME+E  I
Sbjct: 25 QDDSVVQFKIKRHTPLSKLMNAYCDAQ------------------------LEMEDEGTI 60

Query: 64 EVYQEQTG 71
          +V+Q+QTG
Sbjct: 61 DVFQQQTG 68


>gi|239509111 PREDICTED: similar to Small ubiquitin-related
          modifier 2 [Homo sapiens]
          Length = 103

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 24/68 (35%)

Query: 4  QDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVI 63
          QD S + FK+K  T L KL  +YC  Q                        L ME+E  I
Sbjct: 25 QDDSVVQFKIKRHTPLSKLMNAYCDAQ------------------------LEMEDEGTI 60

Query: 64 EVYQEQTG 71
          +V+Q+QTG
Sbjct: 61 DVFQQQTG 68


>gi|239748082 PREDICTED: similar to SMT3 suppressor of mif two 3
           homolog 2 [Homo sapiens]
          Length = 206

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 24/72 (33%)

Query: 1   MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
           ++ Q+ S + F++K  T L KL ++Y                        TP +L ME+E
Sbjct: 157 VAGQEGSVVQFRIKRHTPLSKLMKAY------------------------TPAQLEMEDE 192

Query: 61  DVIEVYQEQTGG 72
           D  +++Q+Q+GG
Sbjct: 193 DTTDMFQQQSGG 204


>gi|239741979 PREDICTED: hypothetical protein XP_002342366 [Homo
           sapiens]
          Length = 164

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 24/72 (33%)

Query: 1   MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 60
           ++ Q+ S + F++K  T L KL ++Y                        TP +L ME+E
Sbjct: 115 VAGQEGSVVQFRIKRHTPLSKLMKAY------------------------TPAQLEMEDE 150

Query: 61  DVIEVYQEQTGG 72
           D  +++Q+Q+GG
Sbjct: 151 DTTDMFQQQSGG 162


>gi|223972685 IQ motif and ubiquitin domain containing [Homo
           sapiens]
          Length = 791

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 16/58 (27%), Positives = 34/58 (58%)

Query: 8   EIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEV 65
           EI    K+ T LK LK+ +    G+P + L+  + G+ + +N T  + G++ +++++V
Sbjct: 143 EIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGVKPQEIVQV 200


>gi|169790973 parkin isoform 3 [Homo sapiens]
          Length = 316

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 12 KVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKE 54
          +V   T + +LKE   +RQGVP + LR +F G+ + ++ T +E
Sbjct: 16 EVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQE 58


>gi|67191208 ubiquitin C [Homo sapiens]
          Length = 685

 Score = 33.1 bits (74), Expect = 0.050
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 69  QTGG 72
             GG
Sbjct: 225 LRGG 228



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9  IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
          I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 69 QTGG 72
            GG
Sbjct: 73 LRGG 76



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 89  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 69  QTGG 72
             GG
Sbjct: 149 LRGG 152



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 241 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300

Query: 69  QTGG 72
             GG
Sbjct: 301 LRGG 304



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 317 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376

Query: 69  QTGG 72
             GG
Sbjct: 377 LRGG 380



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 393 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452

Query: 69  QTGG 72
             GG
Sbjct: 453 LRGG 456



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 469 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528

Query: 69  QTGG 72
             GG
Sbjct: 529 LRGG 532



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 545 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604

Query: 69  QTGG 72
             GG
Sbjct: 605 LRGG 608



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 621 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680

Query: 69  QTGG 72
             GG
Sbjct: 681 LRGG 684


>gi|11024714 ubiquitin B precursor [Homo sapiens]
          Length = 229

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9  IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
          I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 69 QTGG 72
            GG
Sbjct: 73 LRGG 76



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 89  ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148

Query: 69  QTGG 72
             GG
Sbjct: 149 LRGG 152



 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224

Query: 69  QTGG 72
             GG
Sbjct: 225 LRGG 228


>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
          sapiens]
          Length = 156

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9  IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
          I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 69 QTGG 72
            GG
Sbjct: 73 LRGG 76


>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
          sapiens]
          Length = 156

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9  IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
          I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 69 QTGG 72
            GG
Sbjct: 73 LRGG 76


>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
          sapiens]
          Length = 128

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9  IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
          I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 69 QTGG 72
            GG
Sbjct: 73 LRGG 76


>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
          sapiens]
          Length = 128

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 13/64 (20%), Positives = 33/64 (51%)

Query: 9  IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQE 68
          I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +   
Sbjct: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72

Query: 69 QTGG 72
            GG
Sbjct: 73 LRGG 76


>gi|5453760 neural precursor cell expressed, developmentally
          down-regulated 8 [Homo sapiens]
          Length = 81

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/65 (21%), Positives = 33/65 (50%)

Query: 8  EIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQ 67
          EI   ++ T  ++++KE   +++G+P    R ++ G+++ D  T  +  +    V+ +  
Sbjct: 12 EIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVL 71

Query: 68 EQTGG 72
             GG
Sbjct: 72 ALRGG 76


>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
          Length = 334

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 11/57 (19%), Positives = 31/57 (54%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEV 65
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +
Sbjct: 81  ITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCNIQKEPTLHL 137


>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
          Length = 334

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 11/57 (19%), Positives = 31/57 (54%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEV 65
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +
Sbjct: 81  ITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCNIQKEPTLHL 137


>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
          Length = 334

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 11/57 (19%), Positives = 31/57 (54%)

Query: 9   IHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEV 65
           I  +V+ +  ++ +K     ++G+P +  R +F G+++ D  T  +  +++E  + +
Sbjct: 81  ITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDCNIQKEPTLHL 137


>gi|239754164 PREDICTED: similar to mCG21560 [Homo sapiens]
          Length = 93

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 1  MSDQDSSEIHFKVKMTTHLKKLKESYCQ 28
          ++ QD S   FK+K  T L KL ++YC+
Sbjct: 66 VAGQDGSVAQFKIKRHTPLSKLMKAYCE 93


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,964,991
Number of Sequences: 37866
Number of extensions: 108170
Number of successful extensions: 255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 203
Number of HSP's gapped (non-prelim): 49
length of query: 76
length of database: 18,247,518
effective HSP length: 48
effective length of query: 28
effective length of database: 16,429,950
effective search space: 460038600
effective search space used: 460038600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.