Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5453954
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453954 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 1 [Homo sapiens]
(602 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453954 delta isoform of regulatory subunit B56, protein phos... 1212 0.0
gi|31083280 delta isoform of regulatory subunit B56, protein pho... 1134 0.0
gi|31083288 delta isoform of regulatory subunit B56, protein pho... 981 0.0
gi|240849359 gamma isoform of regulatory subunit B56, protein ph... 838 0.0
gi|240849353 gamma isoform of regulatory subunit B56, protein ph... 833 0.0
gi|31083259 gamma isoform of regulatory subunit B56, protein pho... 828 0.0
gi|31083236 gamma isoform of regulatory subunit B56, protein pho... 782 0.0
gi|31083243 gamma isoform of regulatory subunit B56, protein pho... 758 0.0
gi|5453956 epsilon isoform of regulatory subunit B56, protein ph... 627 e-179
gi|5453950 protein phosphatase 2, regulatory subunit B (B56), al... 621 e-178
gi|5453952 beta isoform of regulatory subunit B56, protein phosp... 612 e-175
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 49 1e-05
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 43 0.001
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 43 0.001
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 43 0.001
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 42 0.001
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 42 0.001
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 40 0.005
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 40 0.005
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 40 0.005
gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 40 0.005
gi|83977459 pleckstrin homology-like domain, family A, member 1 ... 39 0.018
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.018
gi|27477113 sterol regulatory element-binding transcription fact... 38 0.023
gi|10863889 squamous cell carcinoma antigen recognized by T cell... 38 0.023
gi|41406050 docking protein 2 [Homo sapiens] 37 0.052
gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogen... 37 0.052
gi|38788260 bromodomain PHD finger transcription factor isoform ... 37 0.068
gi|38788274 bromodomain PHD finger transcription factor isoform ... 37 0.068
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.068
>gi|5453954 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 1 [Homo sapiens]
Length = 602
Score = 1212 bits (3135), Expect = 0.0
Identities = 602/602 (100%), Positives = 602/602 (100%)
Query: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS
Sbjct: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
Query: 61 NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ 120
NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ
Sbjct: 61 NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ 120
Query: 121 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 180
KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF
Sbjct: 121 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 180
Query: 181 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 240
RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
Sbjct: 181 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 240
Query: 241 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 300
LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL
Sbjct: 241 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 300
Query: 301 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 360
LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP
Sbjct: 301 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 360
Query: 361 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 420
VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE
Sbjct: 361 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 420
Query: 421 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 480
RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL
Sbjct: 421 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 480
Query: 481 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 540
FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT
Sbjct: 481 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 540
Query: 541 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 600
AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE
Sbjct: 541 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 600
Query: 601 AL 602
AL
Sbjct: 601 AL 602
>gi|31083280 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 2 [Homo sapiens]
Length = 570
Score = 1134 bits (2934), Expect = 0.0
Identities = 570/602 (94%), Positives = 570/602 (94%), Gaps = 32/602 (5%)
Query: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS
Sbjct: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
Query: 61 NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ 120
NSTPPPTQLSKIKYSGGPQIVKKE LFIQ
Sbjct: 61 NSTPPPTQLSKIKYSGGPQIVKKE--------------------------------LFIQ 88
Query: 121 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 180
KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF
Sbjct: 89 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 148
Query: 181 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 240
RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
Sbjct: 149 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 208
Query: 241 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 300
LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL
Sbjct: 209 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 268
Query: 301 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 360
LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP
Sbjct: 269 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 328
Query: 361 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 420
VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE
Sbjct: 329 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 388
Query: 421 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 480
RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL
Sbjct: 389 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 448
Query: 481 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 540
FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT
Sbjct: 449 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 508
Query: 541 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 600
AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE
Sbjct: 509 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 568
Query: 601 AL 602
AL
Sbjct: 569 AL 570
>gi|31083288 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 3 [Homo sapiens]
Length = 496
Score = 981 bits (2535), Expect = 0.0
Identities = 487/491 (99%), Positives = 490/491 (99%)
Query: 112 QEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEA 171
++ +ELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEA
Sbjct: 6 KKEKELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEA 65
Query: 172 VTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIA 231
VTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIA
Sbjct: 66 VTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIA 125
Query: 232 KKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYET 291
KKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYET
Sbjct: 126 KKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYET 185
Query: 292 EHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFL 351
EHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFL
Sbjct: 186 EHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFL 245
Query: 352 EKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCV 411
EKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCV
Sbjct: 246 EKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCV 305
Query: 412 SSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALK 471
SSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALK
Sbjct: 306 SSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALK 365
Query: 472 LFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPV 531
LFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPV
Sbjct: 366 LFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPV 425
Query: 532 YSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRA 591
YSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRA
Sbjct: 426 YSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRA 485
Query: 592 EEFLTASQEAL 602
EEFLTASQEAL
Sbjct: 486 EEFLTASQEAL 496
>gi|240849359 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform f [Homo sapiens]
Length = 540
Score = 838 bits (2166), Expect = 0.0
Identities = 435/600 (72%), Positives = 482/600 (80%), Gaps = 62/600 (10%)
Query: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
MP K KKEKE PK K + K S G+D T E++ S ++ S
Sbjct: 1 MPNKNKKEKESPKAGK-SGKSSKEGQD-----TVESEQ---------------ISVRKNS 39
Query: 61 NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ 120
P T +KIK IVKK++RQ+SSRF+ S NRELQKLP+LKD P ++E+LFIQ
Sbjct: 40 LVAVPSTVSAKIKVPVSQPIVKKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQ 99
Query: 121 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 180
KLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE IYPE V MF+VN+F
Sbjct: 100 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF 159
Query: 181 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 240
RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
Sbjct: 160 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 219
Query: 241 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 300
L LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFYRFIYETEHHNGIAEL
Sbjct: 220 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL 279
Query: 301 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 360
LEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK+S+LTEP
Sbjct: 280 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP 339
Query: 361 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 420
V++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFRQLAKCVSSPHFQVAE
Sbjct: 340 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE 399
Query: 421 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 480
RALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGLIYNALKLFMEMNQKL
Sbjct: 400 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL 459
Query: 481 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 540
FDDCTQQ+KAEK K + +MKEREE W KIE LA+ NP
Sbjct: 460 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANP----------------------- 496
Query: 541 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 600
Q KD KK++ L RRKSELPQD +T KALEAH RA+E ASQ+
Sbjct: 497 ----------------QAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADEL--ASQD 538
>gi|240849353 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform e [Homo sapiens]
Length = 555
Score = 833 bits (2152), Expect = 0.0
Identities = 431/600 (71%), Positives = 483/600 (80%), Gaps = 47/600 (7%)
Query: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
MP K KKEKE PK K + K S G+D T E++ + PSS K P
Sbjct: 1 MPNKNKKEKESPKAGK-SGKSSKEGQD-----TVESEG---------TSPEEPSSPKVP- 44
Query: 61 NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ 120
PP + GG Q +D P ++E+LFIQ
Sbjct: 45 ---PPLLPELLVLIFGGLQG--------------------------RDVPPADQEKLFIQ 75
Query: 121 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 180
KLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE IYPE V MF+VN+F
Sbjct: 76 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF 135
Query: 181 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 240
RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
Sbjct: 136 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 195
Query: 241 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 300
L LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFYRFIYETEHHNGIAEL
Sbjct: 196 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL 255
Query: 301 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 360
LEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK+S+LTEP
Sbjct: 256 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP 315
Query: 361 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 420
V++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFRQLAKCVSSPHFQVAE
Sbjct: 316 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE 375
Query: 421 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 480
RALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGLIYNALKLFMEMNQKL
Sbjct: 376 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL 435
Query: 481 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 540
FDDCTQQ+KAEK K + +MKEREE W KIE LA+ NPQY ++ + +MET+ P
Sbjct: 436 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQYTVYSQASTMSIPVAMETDGPL 495
Query: 541 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 600
ED+Q+L++TV+ EA Q KD KK++ L RRKSELPQD +T KALEAH RA+E ASQ+
Sbjct: 496 FEDVQMLRKTVKDEAHQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADEL--ASQD 553
>gi|31083259 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform a [Homo sapiens]
Length = 524
Score = 828 bits (2138), Expect = 0.0
Identities = 404/495 (81%), Positives = 451/495 (91%), Gaps = 2/495 (0%)
Query: 106 LKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTE 165
++D P ++E+LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE
Sbjct: 30 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITE 89
Query: 166 AIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 225
IYPE V MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD
Sbjct: 90 PIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 149
Query: 226 FQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFY 285
FQPNIAKKYIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFY
Sbjct: 150 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209
Query: 286 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAY 345
RFIYETEHHNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAY
Sbjct: 210 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 269
Query: 346 CVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFR 405
CVVQFLEK+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFR
Sbjct: 270 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 329
Query: 406 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGL 465
QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGL
Sbjct: 330 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 389
Query: 466 IYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAP 525
IYNALKLFMEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE LA+ NPQY ++
Sbjct: 390 IYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQYTVYSQA 449
Query: 526 PPLPPVYSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKAL 585
+ +MET+ P ED+Q+L++TV+ EA Q KD KK++ L RRKSELPQD +T KAL
Sbjct: 450 STMSIPVAMETDGPLFEDVQMLRKTVKDEAHQAQKDPKKDRPLARRKSELPQDPHTKKAL 509
Query: 586 EAHKRAEEFLTASQE 600
EAH RA+E ASQ+
Sbjct: 510 EAHCRADEL--ASQD 522
>gi|31083236 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform b [Homo sapiens]
Length = 485
Score = 782 bits (2019), Expect = 0.0
Identities = 390/495 (78%), Positives = 427/495 (86%), Gaps = 41/495 (8%)
Query: 106 LKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTE 165
++D P ++E+LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE
Sbjct: 30 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITE 89
Query: 166 AIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 225
IYPE V MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD
Sbjct: 90 PIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 149
Query: 226 FQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFY 285
FQPNIAKKYIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFY
Sbjct: 150 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209
Query: 286 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAY 345
RFIYETEHHNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAY
Sbjct: 210 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 269
Query: 346 CVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFR 405
CVVQFLEK+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFR
Sbjct: 270 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 329
Query: 406 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGL 465
QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGL
Sbjct: 330 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 389
Query: 466 IYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAP 525
IYNALKLFMEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE LA+ NP
Sbjct: 390 IYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANP-------- 441
Query: 526 PPLPPVYSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKAL 585
Q KD KK++ L RRKSELPQD +T KAL
Sbjct: 442 -------------------------------QAQKDPKKDRPLARRKSELPQDPHTKKAL 470
Query: 586 EAHKRAEEFLTASQE 600
EAH RA+E ASQ+
Sbjct: 471 EAHCRADEL--ASQD 483
>gi|31083243 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform c [Homo sapiens]
Length = 449
Score = 758 bits (1956), Expect = 0.0
Identities = 363/413 (87%), Positives = 395/413 (95%)
Query: 106 LKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTE 165
++D P ++E+LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE
Sbjct: 30 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITE 89
Query: 166 AIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 225
IYPE V MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD
Sbjct: 90 PIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPD 149
Query: 226 FQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFY 285
FQPNIAKKYIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFY
Sbjct: 150 FQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209
Query: 286 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAY 345
RFIYETEHHNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAY
Sbjct: 210 RFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAY 269
Query: 346 CVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFR 405
CVVQFLEK+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFR
Sbjct: 270 CVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFR 329
Query: 406 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGL 465
QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGL
Sbjct: 330 QLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGL 389
Query: 466 IYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQ 518
IYNALKLFMEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE LA+ NPQ
Sbjct: 390 IYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ 442
>gi|5453956 epsilon isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 467
Score = 627 bits (1616), Expect = e-179
Identities = 312/456 (68%), Positives = 374/456 (82%), Gaps = 9/456 (1%)
Query: 62 STPPPTQLSKIKYSG----GPQIVKKERRQSSSRF-NLSKNRELQKLPALKDSPTQEREE 116
S+ P T S K G + +++R QSSS+F + K EL LP LKD P+ E+ E
Sbjct: 2 SSAPTTPPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPE 61
Query: 117 LFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFS 176
LF++KL+QCCV+FDF+ D LSDLK KE KR+ LNE+V+YIT SR +TE YPE V M S
Sbjct: 62 LFLKKLQQCCVIFDFM-DTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVS 120
Query: 177 VNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYID 236
N+FRTLPPS + EFDPEEDEPTLEA+WPHLQLVYEFF+RFLES +FQP+IAKKYID
Sbjct: 121 CNIFRTLPPSDSN---EFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYID 177
Query: 237 QKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNG 296
QKFVL LL+LFDSEDPRERD+LKT+LHRIYGKFLGLRA+IR+QIN+IF RF+YETEH NG
Sbjct: 178 QKFVLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNG 237
Query: 297 IAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESS 356
+AELLEILGSIINGFALPLK EHK FL++VL+PLH V+SLS++H QLAYC+VQFLEK+ S
Sbjct: 238 VAELLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPS 297
Query: 357 LTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHF 416
LTEPVI GL+KFWPKT S KEVMFL ELEEILDVIEPS+F K+ EPLF+Q+AKCVSSPHF
Sbjct: 298 LTEPVIRGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHF 357
Query: 417 QVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEM 476
QVAERALYYWNNEYIMSLI +N+ +LPIMF +LYR SK HWN I L+YN LK FMEM
Sbjct: 358 QVAERALYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEM 417
Query: 477 NQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEEL 512
N +FD+ T YK+++Q+ + + KEREE+W+K+E+L
Sbjct: 418 NSTMFDELTATYKSDRQREKKKEKEREELWKKLEDL 453
>gi|5453950 protein phosphatase 2, regulatory subunit B (B56), alpha
isoform [Homo sapiens]
Length = 486
Score = 621 bits (1601), Expect = e-178
Identities = 299/432 (69%), Positives = 365/432 (84%), Gaps = 5/432 (1%)
Query: 82 KKERRQSSSRFNLSKNR-ELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLK 140
+++R Q SS+F ++ EL LP LKD+ + E++ELF QKL+QCC+LFDF+ D +SDLK
Sbjct: 34 RQKRSQGSSQFRSQGSQAELHPLPQLKDATSNEQQELFCQKLQQCCILFDFM-DSVSDLK 92
Query: 141 FKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDE 200
KE+KRA LNE+VEY++ +R V+ E+ Y + V M S N+FRTLPPS NP +FDPEEDE
Sbjct: 93 SKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPSDNP---DFDPEEDE 149
Query: 201 PTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKT 260
PTLEA+WPH+QLVYEFFLRFLESPDFQP+IAK+YIDQKFV LL+LFDSEDPRERDFLKT
Sbjct: 150 PTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKT 209
Query: 261 ILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHK 320
+LHRIYGKFLGLRA+IR+QIN+IF RFIYETEH NG+AELLEILGSIINGFALPLK EHK
Sbjct: 210 VLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHK 269
Query: 321 MFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMF 380
FL++VL+P+H K L+++H QLAYCVVQFLEK+++LTEPVI GLLKFWPKT S KEVMF
Sbjct: 270 QFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMF 329
Query: 381 LNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA 440
L E+EEILDVIEP++F K+ EPLF+Q++KCVSS HFQVAERALY+WNNEYI+SLI +N
Sbjct: 330 LGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENID 389
Query: 441 RVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMK 500
++LPIMF +LY+ SK HWN TI L+YN LK MEMN KLFDD T YKAE+Q+ + +
Sbjct: 390 KILPIMFASLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYKAERQREKKKEL 449
Query: 501 EREEMWQKIEEL 512
EREE+W+K+EEL
Sbjct: 450 EREELWKKLEEL 461
>gi|5453952 beta isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 497
Score = 612 bits (1577), Expect = e-175
Identities = 306/464 (65%), Positives = 365/464 (78%), Gaps = 6/464 (1%)
Query: 50 SQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNR-ELQKLPALKD 108
S P S + + PPP ++ + + R SSS+F N+ EL LP LKD
Sbjct: 9 STPTSPSSPGLSPVPPPDKVDGFSRRSLRR-ARPRRSHSSSQFRYQSNQQELTPLPLLKD 67
Query: 109 SPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIY 168
P E EL +KL QC V+FDF+ D ++DLK KEVKRA LNE+VE + +R V+ E +Y
Sbjct: 68 VPASELHELLSRKLAQCGVMFDFL-DCVADLKGKEVKRAALNELVECVGSTRGVLIEPVY 126
Query: 169 PEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQP 228
P+ + M SVN+FRTLPPS NP EFDPEEDEP LE +WPHLQLVYEFFLRFLESPDFQP
Sbjct: 127 PDIIRMISVNIFRTLPPSENP---EFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQP 183
Query: 229 NIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFI 288
++AK+Y+DQKFVL LL+LFDSEDPRER++LKTILHR+YGKFLGLRAYIR+Q NHIF RFI
Sbjct: 184 SVAKRYVDQKFVLMLLELFDSEDPREREYLKTILHRVYGKFLGLRAYIRKQCNHIFLRFI 243
Query: 289 YETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVV 348
YE EH NG+AELLEILGSIINGFALPLK EHK FL+RVL+PLH VKSLSV+H QLAYCVV
Sbjct: 244 YEFEHFNGVAELLEILGSIINGFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVV 303
Query: 349 QFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLA 408
QFLEK+++LTE VI GLLK+WPKT + KEVMFL E+EEILDVIEPS+F K+ EPLF+Q+A
Sbjct: 304 QFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEMEEILDVIEPSQFVKIQEPLFKQVA 363
Query: 409 KCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYN 468
+CVSSPHFQVAERALY+WNNEYI+SLI DN VLP +F LY+ SK HWN+TI LIYN
Sbjct: 364 RCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYN 423
Query: 469 ALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEEL 512
LK FMEMN KLFD+ T YK EKQ+ + + +ER+E+WQ +EEL
Sbjct: 424 VLKTFMEMNGKLFDELTASYKLEKQQEQQKAQERQELWQGLEEL 467
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 49.3 bits (116), Expect = 1e-05
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 6 KKEKEPPKVAKCTAKP-SSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTP 64
+ + PP A P +S+ D +T + QPQPQP QPQ +PPS+++ P S+P
Sbjct: 2370 QSDPSPPSQGTKPALPLASTSSDPPQASTAQPQPQPQPPKQPQLIGRPPSASQTPVPSSP 2429
Query: 65 PPTQLSKIKYSGGPQIVKKERRQSSSRF 92
++ ++ S PQ+++ + Q + F
Sbjct: 2430 LQISMTSLQNSLPPQLLQYQCDQCTVAF 2457
Score = 34.3 bits (77), Expect = 0.34
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 11 PPKVAKCTAKPSSSG--KDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQ 68
PP + +PSS G K +T P P P P P PP P S PP Q
Sbjct: 1964 PPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQ 2023
Query: 69 L 69
L
Sbjct: 2024 L 2024
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 42.7 bits (99), Expect = 0.001
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 26 KDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKER 85
+D G QPQ QPQPQ Q Q + P + PPPTQ PQ + +
Sbjct: 913 EDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQ-------PQQFRNDN 965
Query: 86 RQSSSRFNLSKNRE 99
RQ +FN +++E
Sbjct: 966 RQ---QFNSGRDQE 976
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 42.7 bits (99), Expect = 0.001
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 26 KDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKER 85
+D G QPQ QPQPQ Q Q + P + PPPTQ PQ + +
Sbjct: 920 EDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQ-------PQQFRNDN 972
Query: 86 RQSSSRFNLSKNRE 99
RQ +FN +++E
Sbjct: 973 RQ---QFNSGRDQE 983
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 42.7 bits (99), Expect = 0.001
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 26 KDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKER 85
+D G QPQ QPQPQ Q Q + P + PPPTQ PQ + +
Sbjct: 935 EDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQ-------PQQFRNDN 987
Query: 86 RQSSSRFNLSKNRE 99
RQ +FN +++E
Sbjct: 988 RQ---QFNSGRDQE 998
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 37 QPQPQPQPQPQAQSQ---PPSSNKRPSNSTPPP 66
QPQPQPQPQPQ+Q Q PP +P TP P
Sbjct: 407 QPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAP 439
Score = 34.3 bits (77), Expect = 0.34
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 35 EAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPP 66
++QPQPQ PQPQ Q Q P+ + T PP
Sbjct: 417 QSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPP 448
Score = 32.3 bits (72), Expect = 1.3
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 13/48 (27%)
Query: 35 EAQPQPQPQPQ--PQAQSQP---------PSSNKRPSNSTP--PPTQL 69
+ QPQ QPQPQ PQ Q+QP P P N P PPT+L
Sbjct: 413 QPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTEL 460
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 37 QPQPQPQPQPQAQSQ---PPSSNKRPSNSTPPP 66
QPQPQPQPQPQ+Q Q PP +P TP P
Sbjct: 407 QPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAP 439
Score = 34.3 bits (77), Expect = 0.34
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 35 EAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPP 66
++QPQPQ PQPQ Q Q P+ + T PP
Sbjct: 417 QSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPP 448
Score = 32.3 bits (72), Expect = 1.3
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 13/48 (27%)
Query: 35 EAQPQPQPQPQ--PQAQSQP---------PSSNKRPSNSTP--PPTQL 69
+ QPQ QPQPQ PQ Q+QP P P N P PPT+L
Sbjct: 413 QPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTEL 460
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 40.4 bits (93), Expect = 0.005
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 18/117 (15%)
Query: 2 PYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQ-------AQSQPPS 54
P ++++ PP + P + + QPQ QPQPQPQ Q QPP
Sbjct: 1643 PPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPL 1702
Query: 55 SNKRPSNSTPPPTQLSKIKYSGGPQIVKKERR-----------QSSSRFNLSKNREL 100
S +NS P + +I SG + R Q S+ F+L+K ++L
Sbjct: 1703 SQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQL 1759
Score = 33.9 bits (76), Expect = 0.44
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 15 AKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKY 74
A C+ K S + ++ QP P P QP QPP +P+ PPP Q + +
Sbjct: 1628 ANCSIKSPQSCVVERPPSNQQQQPPPPPPQQP----QPPPPQPQPAPQPPPPQQQPQQQP 1683
Query: 75 SGGPQ 79
PQ
Sbjct: 1684 QPQPQ 1688
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 40.4 bits (93), Expect = 0.005
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 18/117 (15%)
Query: 2 PYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQ-------AQSQPPS 54
P ++++ PP + P + + QPQ QPQPQPQ Q QPP
Sbjct: 1643 PPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPL 1702
Query: 55 SNKRPSNSTPPPTQLSKIKYSGGPQIVKKERR-----------QSSSRFNLSKNREL 100
S +NS P + +I SG + R Q S+ F+L+K ++L
Sbjct: 1703 SQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQL 1759
Score = 33.9 bits (76), Expect = 0.44
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 15 AKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKY 74
A C+ K S + ++ QP P P QP QPP +P+ PPP Q + +
Sbjct: 1628 ANCSIKSPQSCVVERPPSNQQQQPPPPPPQQP----QPPPPQPQPAPQPPPPQQQPQQQP 1683
Query: 75 SGGPQ 79
PQ
Sbjct: 1684 QPQPQ 1688
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 40.4 bits (93), Expect = 0.005
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 18/117 (15%)
Query: 2 PYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQ-------AQSQPPS 54
P ++++ PP + P + + QPQ QPQPQPQ Q QPP
Sbjct: 1643 PPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPL 1702
Query: 55 SNKRPSNSTPPPTQLSKIKYSGGPQIVKKERR-----------QSSSRFNLSKNREL 100
S +NS P + +I SG + R Q S+ F+L+K ++L
Sbjct: 1703 SQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQL 1759
Score = 33.9 bits (76), Expect = 0.44
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 15 AKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKY 74
A C+ K S + ++ QP P P QP QPP +P+ PPP Q + +
Sbjct: 1628 ANCSIKSPQSCVVERPPSNQQQQPPPPPPQQP----QPPPPQPQPAPQPPPPQQQPQQQP 1683
Query: 75 SGGPQ 79
PQ
Sbjct: 1684 QPQPQ 1688
>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
Length = 614
Score = 40.4 bits (93), Expect = 0.005
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 36 AQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGP 78
A PQPQPQPQP SQP + +R + P + + Y GP
Sbjct: 441 AGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGP 483
>gi|83977459 pleckstrin homology-like domain, family A, member 1
[Homo sapiens]
Length = 401
Score = 38.5 bits (88), Expect = 0.018
Identities = 18/35 (51%), Positives = 20/35 (57%)
Query: 35 EAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQL 69
+ Q QPQPQPQPQ Q QP S + P P QL
Sbjct: 314 QPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQPQQL 348
Score = 34.3 bits (77), Expect = 0.34
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 35 EAQPQPQPQPQPQAQSQPPSSNKRPSNSTPP 65
++QPQPQPQP+PQ Q P + P + P
Sbjct: 332 QSQPQPQPQPKPQPQQLHPYPHPHPHPHSHP 362
Score = 33.9 bits (76), Expect = 0.44
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 35 EAQPQPQPQPQPQAQSQP-PSSNKRPSNSTPPPTQ 68
+ QP QPQPQPQ Q QP P +P + P Q
Sbjct: 304 QQQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQ 338
Score = 32.3 bits (72), Expect = 1.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 35 EAQPQPQPQPQPQAQSQPPSSNKRP 59
+ QPQPQ QPQPQ Q +P P
Sbjct: 326 QPQPQPQSQPQPQPQPKPQPQQLHP 350
Score = 32.0 bits (71), Expect = 1.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 35 EAQPQPQPQPQPQAQSQPPSSNKRP 59
+ QPQ QPQPQPQ + QP + P
Sbjct: 328 QPQPQSQPQPQPQPKPQPQQLHPYP 352
Score = 31.2 bits (69), Expect = 2.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 34 EEAQPQPQPQPQPQAQSQP-PSSNKRPSNSTPPPTQ 68
++ QPQPQPQ Q Q QP P +P + P Q
Sbjct: 305 QQPPSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQ 340
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.5 bits (88), Expect = 0.018
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 6 KKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTP- 64
K + PP+ K + S GK G QPQ P P + Q PP K+P P
Sbjct: 137 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPP 196
Query: 65 -----PPTQLSKIKYSGGP 78
PP Q K + S P
Sbjct: 197 GKPQGPPPQGDKSRSSQSP 215
Score = 37.0 bits (84), Expect = 0.052
Identities = 20/60 (33%), Positives = 24/60 (40%)
Query: 6 KKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPP 65
K + PP+ K + S GK G QPQ P P + Q PP RP PP
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPP 135
Score = 36.6 bits (83), Expect = 0.068
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 6 KKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPP 65
K + PP+ K + S GK G QPQ P P + Q PP +P PP
Sbjct: 198 KPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 257
Score = 31.2 bits (69), Expect = 2.9
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 6 KKEKEPPKVAKCTAKPSSSGKDGG----GENTEEAQPQP-QPQ-PQPQAQSQPPSSNKRP 59
K + PP+ K P GK G G+ + +Q P +PQ P PQ +QP P
Sbjct: 178 KPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPP 237
Query: 60 SNSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQE 113
PP Q K G P K + + SK++ + P P Q+
Sbjct: 238 GKPQGPPPQGGN-KPQGPPPPGKPQGPPAQGG---SKSQSARSPPGKPQGPPQQ 287
Score = 30.0 bits (66), Expect = 6.4
Identities = 15/59 (25%), Positives = 20/59 (33%)
Query: 20 KPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGP 78
KP GG ++ P +PQ PQ + P P+ P Q GP
Sbjct: 259 KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGP 317
Score = 29.6 bits (65), Expect = 8.3
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 7 KEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQ-PQAQSQPPSSNKRPSNSTPP 65
K + PP K P+ G + +PQ PQ + Q PP + P P
Sbjct: 250 KPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 309
Query: 66 P 66
P
Sbjct: 310 P 310
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 38.1 bits (87), Expect = 0.023
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 37 QPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQL 69
QP+PQPQPQPQ Q Q + P+ ST P T++
Sbjct: 132 QPRPQPQPQPQTQLQQQTVMITPTFSTTPQTRI 164
>gi|10863889 squamous cell carcinoma antigen recognized by T cells 1
[Homo sapiens]
Length = 800
Score = 38.1 bits (87), Expect = 0.023
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 25 GKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKE 84
G+ E EE +P PQP P + + + PPP G PQ+++++
Sbjct: 443 GRRRVSEVEEEKEPVPQPLPSDDTRVENMDISDEEEGGAPPP---------GSPQVLEED 493
Query: 85 RRQSSSRFNLSKN---RELQKLPALKDS 109
+ + L K R+LQ+L L+DS
Sbjct: 494 EAELELQKQLEKGRRLRQLQQLQQLRDS 521
>gi|41406050 docking protein 2 [Homo sapiens]
Length = 412
Score = 37.0 bits (84), Expect = 0.052
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 31 ENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKI 72
+N A PQPQP P + +P S RP +S PPP+ + +
Sbjct: 246 KNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPV 287
>gi|7657116 glyceraldehyde-3-phosphate dehydrogenase,
spermatogenic [Homo sapiens]
Length = 408
Score = 37.0 bits (84), Expect = 0.052
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 31 ENTEEAQPQPQPQPQP-QAQSQPPSSNKRPSNSTPPPTQLS 70
E E +PQPQP+P P + + +PP P +TPPP +S
Sbjct: 31 EPKAEVEPQPQPEPTPVREEIKPPPPPLPPHPATPPPKMVS 71
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 36.6 bits (83), Expect = 0.068
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 18 TAKPSSSGKDGGGENTEE-----AQPQPQPQP----------QPQAQSQPPSSNKRPSNS 62
T P+ S G E + AQPQPQ QP QP+ Q+Q S+ PS +
Sbjct: 2380 TLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEA 2439
Query: 63 TPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQERE 115
P Q SK + + Q + QS R ++ + SP Q+ +
Sbjct: 2440 QPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQ 2492
Score = 33.5 bits (75), Expect = 0.58
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 22/163 (13%)
Query: 12 PKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQA--QSQPPSSNKRPSN-----STP 64
P+V T S + + + ++PQ Q QPQ+ Q Q P + PS STP
Sbjct: 2423 PEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTP 2482
Query: 65 ---PPTQLSKIKYSGGP----------QIVKKERRQSSSRFNLSKNRELQKLPALKDSPT 111
P Q S+++ + QI + + QS + + N ++ L K
Sbjct: 2483 SQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVVMKHNAVIEHLKQKKSMTP 2542
Query: 112 QEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVE 154
EREE Q++ C + ++ D + + + K+ E VE
Sbjct: 2543 AEREE--NQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVE 2583
Score = 30.8 bits (68), Expect = 3.7
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 4 KLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNST 63
K+KKEK+ ++A+ TA A P P P P A PP PS
Sbjct: 2633 KIKKEKDLMQLAQATAV---------------AAPCPPVTPAPPAPPAPP-----PSPPP 2672
Query: 64 PPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELF 118
PP Q + + + ++R++ + + SK+++ +K+ + T++ +L+
Sbjct: 2673 PPAVQHTGLLSTPTLPAASQKRKREEEKDSSSKSKK-KKMISTTSKETKKDTKLY 2726
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 36.6 bits (83), Expect = 0.068
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 18 TAKPSSSGKDGGGENTEE-----AQPQPQPQP----------QPQAQSQPPSSNKRPSNS 62
T P+ S G E + AQPQPQ QP QP+ Q+Q S+ PS +
Sbjct: 2254 TLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEA 2313
Query: 63 TPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQERE 115
P Q SK + + Q + QS R ++ + SP Q+ +
Sbjct: 2314 QPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQ 2366
Score = 30.8 bits (68), Expect = 3.7
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 4 KLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNST 63
K+KKEK+ ++A+ TA A P P P P A PP PS
Sbjct: 2650 KIKKEKDLMQLAQATAV---------------AAPCPPVTPAPPAPPAPP-----PSPPP 2689
Query: 64 PPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELF 118
PP Q + + + ++R++ + + SK+++ +K+ + T++ +L+
Sbjct: 2690 PPAVQHTGLLSTPTLPAASQKRKREEEKDSSSKSKK-KKMISTTSKETKKDTKLY 2743
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 36.6 bits (83), Expect = 0.068
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 24/125 (19%)
Query: 21 PSSSGKDGGGENTEEAQPQ---------PQPQPQPQAQSQP-PSSNKRPSNSTPPPTQLS 70
P + GK G N+E P+ P+ +P P A P P ++ P+ + PP
Sbjct: 371 PEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYP 430
Query: 71 KIKYSGGP-----------QIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFI 119
GGP + ++ R+QSSS +L+ R ++ + +ER
Sbjct: 431 D---RGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACA 487
Query: 120 QKLRQ 124
+KL++
Sbjct: 488 EKLKR 492
Score = 31.6 bits (70), Expect = 2.2
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 6 KKEKEPPKVAKCTAKPSSSGKDGGGEN--TEEAQPQPQPQPQPQAQSQPPSSNKRPSNST 63
++ + P K + SSSG GGG T + + P P+ +S+PP
Sbjct: 1394 RQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLP 1453
Query: 64 PPPTQLSKI 72
PPP S +
Sbjct: 1454 PPPPSSSAV 1462
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,074,391
Number of Sequences: 37866
Number of extensions: 1308889
Number of successful extensions: 15180
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 294
Number of HSP's that attempted gapping in prelim test: 12143
Number of HSP's gapped (non-prelim): 2504
length of query: 602
length of database: 18,247,518
effective HSP length: 108
effective length of query: 494
effective length of database: 14,157,990
effective search space: 6994047060
effective search space used: 6994047060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.