PKP2 4623

Name: PKP2	Sequence: fasta or formatted (881aa)		NCBI GI: 148664226
Description: plakophilin 2 isoform 2b		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [837aa] plakophilin 2 isoform 2a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 70 3 C cysteine 1.0 9 1 D aspartate 4.4 39 2 E glutamate 4.9 43 2 F phenylalanine 1.6 14 1 G glycine 7.0 62 2 H histidine 3.2 28 2 I isoleucine 4.1 36 3 K lysine 4.8 42 2 L leucine 10.6 93 2 M methionine 1.7 15 1 N asparagine 5.2 46 2 P proline 4.3 38 2 Q glutamine 5.9 52 2 R arginine 7.0 62 2 S serine 9.5 84 3 T threonine 6.5 57 2 V valine 5.9 52 2 W tryptophan 0.9 8 1 Y tyrosine 3.5 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 plakophilin 2 isoform 2b PKP2 0.933 plakophilin 2 isoform 2a PKP1 0.183 plakophilin 1 isoform 1a LOC652798 0.183 PREDICTED: similar to plakophilin 1, partial PKP1 0.176 plakophilin 1 isoform 1b CTNND2 0.146 catenin (cadherin-associated protein), delta 2 (neur... PKP4 0.144 plakophilin 4 isoform b PKP4 0.144 plakophilin 4 isoform a PKP3 0.142 plakophilin 3 ARVCF 0.126 armadillo repeat protein CTNND1 0.126 catenin, delta 1 isoform 3A CTNND1 0.126 catenin, delta 1 isoform 3A CTNND1 0.126 catenin, delta 1 isoform 3A CTNND1 0.126 catenin, delta 1 isoform 3B CTNND1 0.126 catenin, delta 1 isoform 3AB CTNND1 0.126 catenin, delta 1 isoform 1A CTNND1 0.126 catenin, delta 1 isoform 1A CTNND1 0.126 catenin, delta 1 isoform 1A CTNND1 0.126 catenin, delta 1 isoform 1B CTNND1 0.126 catenin, delta 1 isoform 1AB CTNND1 0.122 catenin, delta 1 isoform 3AC CTNND1 0.122 catenin, delta 1 isoform 3ABC CTNND1 0.122 catenin, delta 1 isoform 1ABC ZNF429 0.017 zinc finger protein 429 YIF1B 0.016 Yip1 interacting factor homolog B isoform 7 FBLIM1 0.016 filamin-binding LIM protein-1 isoform b ZNF714 0.016 zinc finger protein 714 SEPP1 0.010 selenoprotein P isoform 2 BIRC5 0.010 baculoviral IAP repeat-containing protein 5 isoform ... POLR1C 0.010 RNA polymerase I subunit isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.