Guide to the Human Genome
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Name: FUT5 Sequence: fasta or formatted (374aa) NCBI GI: 52485799
Description:

fucosyltransferase 5

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         34           2
 C cysteine            2.1          8           1
 D aspartate           5.3         20           2
 E glutamate           3.7         14           1
 F phenylalanine       4.3         16           2
 G glycine             3.7         14           1
 H histidine           2.9         11           2
 I isoleucine          2.4          9           1
 K lysine              3.2         12           1
 L leucine            10.4         39           2
 M methionine          2.4          9           2
 N asparagine          3.2         12           1
 P proline             9.4         35           3
 Q glutamine           3.7         14           2
 R arginine            6.7         25           2
 S serine              8.3         31           2
 T threonine           4.5         17           1
 V valine              5.3         20           2
 W tryptophan          4.5         17           1
 Y tyrosine            4.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fucosyltransferase 5 
FUT3                  0.862   fucosyltransferase 3 
FUT3                  0.862   fucosyltransferase 3 
FUT3                  0.862   fucosyltransferase 3 
FUT3                  0.862   fucosyltransferase 3 
FUT6                  0.827   fucosyltransferase 6 
FUT6                  0.827   fucosyltransferase 6 
FUT7                  0.316   fucosyltransferase 7 
FUT4                  0.307   fucosyltransferase 4 
FUT9                  0.298   fucosyltransferase 9 (alpha (1,3) fucosyltransferas...
FUT11                 0.088   fucosyltransferase 11 (alpha (1,3) fucosyltransfera...
FUT10                 0.071   fucosyltransferase 10 
SLK                   0.006   serine/threonine kinase 2 
PIK3IP1               0.006   HGFL protein isoform 2 
PIK3IP1               0.006   HGFL protein isoform 1 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform b 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.006   oxysterol binding protein-like 9 isoform a 
KIAA1409              0.006   hypothetical protein LOC57578 
HCRTR2                0.005   orexin receptor 2 
RGAG1                 0.005   retrotransposon gag domain containing 1 
SIRT6                 0.005   sirtuin 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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