Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FUT7 Sequence: fasta or formatted (342aa) NCBI GI: 4758406
Description:

fucosyltransferase 7

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         34           2
 C cysteine            1.8          6           1
 D aspartate           4.1         14           2
 E glutamate           3.8         13           1
 F phenylalanine       5.3         18           2
 G glycine             5.8         20           1
 H histidine           4.1         14           2
 I isoleucine          2.0          7           1
 K lysine              0.6          2           1
 L leucine            11.1         38           2
 M methionine          0.9          3           1
 N asparagine          2.6          9           2
 P proline             8.2         28           2
 Q glutamine           3.8         13           1
 R arginine           11.4         39           2
 S serine              6.1         21           1
 T threonine           4.4         15           1
 V valine              7.0         24           2
 W tryptophan          3.8         13           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fucosyltransferase 7 
FUT4                  0.352   fucosyltransferase 4 
FUT5                  0.351   fucosyltransferase 5 
FUT6                  0.343   fucosyltransferase 6 
FUT6                  0.343   fucosyltransferase 6 
FUT3                  0.343   fucosyltransferase 3 
FUT3                  0.343   fucosyltransferase 3 
FUT3                  0.343   fucosyltransferase 3 
FUT3                  0.343   fucosyltransferase 3 
FUT9                  0.303   fucosyltransferase 9 (alpha (1,3) fucosyltransferas...
FUT11                 0.074   fucosyltransferase 11 (alpha (1,3) fucosyltransfera...
FUT10                 0.074   fucosyltransferase 10 
LOC100133915          0.013   PREDICTED: hypothetical protein 
USH2A                 0.007   usherin isoform B 
TBC1D10B              0.007   TBC1 domain family, member 10B 
ABCC10                0.007   ATP-binding cassette, sub-family C, member 10 
MMP9                  0.006   matrix metalloproteinase 9 preproprotein 
SGK269                0.004   NKF3 kinase family member 
NRSN1                 0.004   neurensin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press