Guide to the Human Genome
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Name: OR1B1 Sequence: fasta or formatted (318aa) NCBI GI: 52219202
Description:

olfactory receptor, family 1, subfamily B, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         28           2
 C cysteine            3.5         11           1
 D aspartate           3.5         11           1
 E glutamate           0.9          3           1
 F phenylalanine       6.3         20           4
 G glycine             5.7         18           2
 H histidine           3.8         12           1
 I isoleucine          5.3         17           2
 K lysine              0.9          3           1
 L leucine            16.0         51           3
 M methionine          3.5         11           2
 N asparagine          3.1         10           1
 P proline             5.3         17           2
 Q glutamine           2.2          7           1
 R arginine            4.7         15           3
 S serine              7.2         23           1
 T threonine           5.0         16           2
 V valine              8.5         27           2
 W tryptophan          1.3          4           1
 Y tyrosine            4.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily B, member 1 ... 
OR1K1                 0.407   olfactory receptor, family 1, subfamily K, member 1 ...
OR1E1                 0.402   olfactory receptor, family 1, subfamily E, member 1...
OR1F1                 0.397   olfactory receptor, family 1, subfamily F, member 1 [...
OR1L1                 0.391   olfactory receptor, family 1, subfamily L, member 1...
OR1E2                 0.386   olfactory receptor, family 1, subfamily E, member 2 ...
OR1J1                 0.383   olfactory receptor, family 1, subfamily J, member 1 ...
OR1M1                 0.378   olfactory receptor, family 1, subfamily M, member 1 ...
OR1N1                 0.375   olfactory receptor, family 1, subfamily N, member 1 ...
OR1D2                 0.371   olfactory receptor, family 1, subfamily D, member 2 [...
OR1G1                 0.370   olfactory receptor, family 1, subfamily G, member 1 ...
OR1L6                 0.370   olfactory receptor, family 1, subfamily L, member 6 ...
OR7D2                 0.370   olfactory receptor, family 7, subfamily D, member 2 ...
OR7C1                 0.370   olfactory receptor, family 7, subfamily C, member 1 ...
OR1J4                 0.368   olfactory receptor, family 1, subfamily J, member 4 ...
OR1J2                 0.363   olfactory receptor, family 1, subfamily J, member 2 ...
OR7E24                0.363   olfactory receptor, family 7, subfamily E, member 2...
OR1C1                 0.360   olfactory receptor, family 1, subfamily C, member 1...
OR7C2                 0.360   olfactory receptor, family 7, subfamily C, member 2 ...
OR1L4                 0.360   olfactory receptor, family 1, subfamily L, member 4 ...
OR1L3                 0.359   olfactory receptor, family 1, subfamily L, member 3 ...
OR1I1                 0.357   olfactory receptor, family 1, subfamily I, member 1 ...
OR7A10                0.354   olfactory receptor, family 7, subfamily A, member 10...
OR10C1                0.352   olfactory receptor, family 10, subfamily C, member 1...
OR2J2                 0.349   olfactory receptor, family 2, subfamily J, member 2...
OR1L8                 0.349   olfactory receptor, family 1, subfamily L, member 8 ...
OR1N2                 0.347   olfactory receptor, family 1, subfamily N, member 2 ...
OR2A12                0.347   olfactory receptor, family 2, subfamily A, member 12...
OR2F1                 0.347   olfactory receptor, family 2, subfamily F, member 1 ...
OR2F2                 0.347   olfactory receptor, family 2, subfamily F, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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