Guide to the Human Genome
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Name: OR2A12 Sequence: fasta or formatted (310aa) NCBI GI: 51921273
Description:

olfactory receptor, family 2, subfamily A, member 12

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         20           1
 C cysteine            3.9         12           1
 D aspartate           1.6          5           1
 E glutamate           2.3          7           1
 F phenylalanine       7.4         23           2
 G glycine             4.2         13           1
 H histidine           2.9          9           1
 I isoleucine          8.1         25           2
 K lysine              3.5         11           2
 L leucine            16.5         51           2
 M methionine          4.2         13           2
 N asparagine          2.9          9           1
 P proline             3.5         11           1
 Q glutamine           3.2         10           1
 R arginine            4.2         13           2
 S serine              8.1         25           2
 T threonine           4.2         13           1
 V valine              7.7         24           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily A, member 12... 
OR2A5                 0.771   olfactory receptor, family 2, subfamily A, member 5 ...
OR2A14                0.750   olfactory receptor, family 2, subfamily A, member 14...
OR2A2                 0.729   olfactory receptor, family 2, subfamily A, member 2...
OR2A1                 0.692   olfactory receptor, family 2, subfamily A, member 1 ...
OR2A42                0.681   olfactory receptor, family 2, subfamily A, member 42...
OR2A25                0.644   olfactory receptor, family 2, subfamily A, member 25...
OR2A7                 0.607   olfactory receptor, family 2, subfamily A, member 7 ...
OR2A4                 0.598   olfactory receptor, family 2, subfamily A, member 4 ...
OR2B2                 0.471   olfactory receptor, family 2, subfamily B, member 2 ...
OR5AP2                0.459   olfactory receptor, family 5, subfamily AP, member 2...
OR2F1                 0.459   olfactory receptor, family 2, subfamily F, member 1 ...
OR2Y1                 0.455   olfactory receptor, family 2, subfamily Y, member 1 ...
OR5R1                 0.455   olfactory receptor, family 5, subfamily R, member 1 ...
OR2G3                 0.454   olfactory receptor, family 2, subfamily G, member 3 ...
OR10A3                0.447   olfactory receptor, family 10, subfamily A, member 3...
OR2C3                 0.447   olfactory receptor, family 2, subfamily C, member 3...
OR5V1                 0.445   olfactory receptor, family 5, subfamily V, member 1 ...
OR2H2                 0.442   olfactory receptor, family 2, subfamily H, member 2 ...
OR10A7                0.442   olfactory receptor, family 10, subfamily A, member 7...
OR10C1                0.442   olfactory receptor, family 10, subfamily C, member 1...
OR10R2                0.442   olfactory receptor, family 10, subfamily R, member 2...
OR2B6                 0.442   olfactory receptor, family 2, subfamily B, member 6 ...
OR2D3                 0.440   olfactory receptor, family 2, subfamily D, member 3 ...
OR2B11                0.439   olfactory receptor, family 2, subfamily B, member 11...
OR2C1                 0.437   olfactory receptor, family 2, subfamily C, member 1...
OR2K2                 0.437   olfactory receptor, family 2, subfamily K, member 2 ...
OR2B3                 0.437   olfactory receptor, family 2, subfamily B, member 3 ...
OR2D2                 0.437   olfactory receptor, family 2, subfamily D, member 2 ...
OR13F1                0.435   olfactory receptor, family 13, subfamily F, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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