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Search of human proteins with 13384604
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
[Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ... 421 e-118
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ... 399 e-112
gi|37675379 dendritic cell-associated C-type lectin 1 isoform e ... 341 3e-94
gi|37675377 dendritic cell-associated C-type lectin 1 isoform d ... 246 9e-66
gi|37675375 dendritic cell-associated C-type lectin 1 isoform c ... 224 4e-59
gi|37675387 dendritic cell-associated C-type lectin 1 isoform f ... 137 8e-33
gi|4505501 oxidized low density lipoprotein (lectin-like) recept... 118 4e-27
gi|153252029 C-type lectin domain family 1, member B isoform a [... 103 1e-22
gi|153252048 C-type lectin domain family 1, member B isoform b [... 97 1e-20
gi|194018501 C-type lectin domain family 12, member B isoform 1 ... 84 8e-17
gi|37577103 C-type lectin-like receptor-1 [Homo sapiens] 84 8e-17
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens] 82 2e-16
gi|47717092 killer cell lectin-like receptor subfamily C, member... 75 5e-14
gi|7262384 killer cell lectin-like receptor subfamily C, member ... 75 5e-14
gi|75709169 killer cell lectin-like receptor subfamily C, member... 72 2e-13
gi|167614498 killer cell lectin-like receptor subfamily D, membe... 72 2e-13
gi|4504889 killer cell lectin-like receptor subfamily D, member ... 72 2e-13
gi|7705574 killer cell lectin-like receptor subfamily F, member ... 72 2e-13
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens] 70 9e-13
gi|75709175 killer cell lectin-like receptor subfamily C, member... 70 1e-12
gi|75709177 killer cell lectin-like receptor subfamily C, member... 70 1e-12
gi|4502681 CD69 molecule [Homo sapiens] 70 2e-12
gi|169234653 NKG2-D type II integral membrane protein [Homo sapi... 70 2e-12
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 69 4e-12
gi|223278339 C-type lectin domain family 4, member M isoform 7 [... 69 4e-12
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 69 4e-12
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 69 4e-12
gi|47717094 killer cell lectin-like receptor subfamily C, member... 69 4e-12
gi|4504881 killer cell lectin-like receptor subfamily C, member ... 69 4e-12
gi|223278350 C-type lectin domain family 4, member M isoform 8 [... 69 4e-12
>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
[Homo sapiens]
Length = 201
Score = 421 bits (1082), Expect = e-118
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGF 120
AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGF
Sbjct: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGF 120
Query: 121 IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS 180
IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS
Sbjct: 121 IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS 180
Query: 181 VIYDQLCSVPSYSICEKKFSM 201
VIYDQLCSVPSYSICEKKFSM
Sbjct: 181 VIYDQLCSVPSYSICEKKFSM 201
>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
[Homo sapiens]
Length = 247
Score = 399 bits (1025), Expect = e-112
Identities = 201/247 (81%), Positives = 201/247 (81%), Gaps = 46/247 (18%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTM----------------------------------------------GVLSSPC 74
AVVLGTM GVLSSPC
Sbjct: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
Query: 75 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW 134
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW
Sbjct: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW 180
Query: 135 IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI 194
IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI
Sbjct: 181 IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI 240
Query: 195 CEKKFSM 201
CEKKFSM
Sbjct: 241 CEKKFSM 247
>gi|37675379 dendritic cell-associated C-type lectin 1 isoform e
[Homo sapiens]
Length = 168
Score = 341 bits (874), Expect = 3e-94
Identities = 168/201 (83%), Positives = 168/201 (83%), Gaps = 33/201 (16%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG------------------------- 35
Query: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGF 120
VLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGF
Sbjct: 36 --------VLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGF 87
Query: 121 IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS 180
IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS
Sbjct: 88 IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS 147
Query: 181 VIYDQLCSVPSYSICEKKFSM 201
VIYDQLCSVPSYSICEKKFSM
Sbjct: 148 VIYDQLCSVPSYSICEKKFSM 168
>gi|37675377 dendritic cell-associated C-type lectin 1 isoform d
[Homo sapiens]
Length = 143
Score = 246 bits (628), Expect = 9e-66
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 61 AVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
>gi|37675375 dendritic cell-associated C-type lectin 1 isoform c
[Homo sapiens]
Length = 189
Score = 224 bits (571), Expect = 4e-59
Identities = 118/164 (71%), Positives = 118/164 (71%), Gaps = 46/164 (28%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTM----------------------------------------------GVLSSPC 74
AVVLGTM GVLSSPC
Sbjct: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
Query: 75 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 164
>gi|37675387 dendritic cell-associated C-type lectin 1 isoform f
[Homo sapiens]
Length = 77
Score = 137 bits (344), Expect = 8e-33
Identities = 67/67 (100%), Positives = 67/67 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTM 67
AVVLGTM
Sbjct: 61 AVVLGTM 67
>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
1 [Homo sapiens]
Length = 273
Score = 118 bits (295), Expect = 4e-27
Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Query: 71 SSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPD 130
S+PCP +WI + ++CYLFS +W+ S+ +C L + LLKI+S+ +L FI +Q S
Sbjct: 141 SAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFI-QQAISYSS 199
Query: 131 NSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVP 190
FW+GLSR PWLWEDGS +LF++R +Q PS C +I +Y + C +
Sbjct: 200 FPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILA 259
Query: 191 SYSICEKKFSM 201
++SIC+KK ++
Sbjct: 260 AFSICQKKANL 270
Score = 30.8 bits (68), Expect = 0.81
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLG 65
SP W L A LG+LCL ++V +VLG
Sbjct: 32 SPWWCLAAATLGVLCLGLVVTIMVLG 57
>gi|153252029 C-type lectin domain family 1, member B isoform a
[Homo sapiens]
Length = 229
Score = 103 bits (257), Expect = 1e-22
Identities = 69/232 (29%), Positives = 102/232 (43%), Gaps = 53/232 (22%)
Query: 11 DEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMGVL 70
DEDGY L+ ++ I+V S A+S WR++A+IL ILC+ ++V V LG V+
Sbjct: 3 DEDGYITLNIKTRKPALISVGS-----ASSSWWRVMALILLILCVGMVVGLVALGIWSVM 57
Query: 71 S-----------------------------------------SPCPPNWIIYEKSCYLFS 89
SPC NW Y SCY F
Sbjct: 58 QRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYGDSCYGFF 117
Query: 90 MSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWE 149
+W+ SK+ C + + LLKID+ N IV+ + ++ W+GLSR ++ W WE
Sbjct: 118 RHNLTWEESKQYCTDMNATLLKIDNRN----IVEYIKARTHLIRWVGLSRQKSNEVWKWE 173
Query: 150 DGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFSM 201
DGS S N+F+ + NC + H ++ C Y +CE+K M
Sbjct: 174 DGSVISENMFEF---LEDGKGNMNCAYFHNGKMHPTFCENKHYLMCERKAGM 222
>gi|153252048 C-type lectin domain family 1, member B isoform b
[Homo sapiens]
Length = 196
Score = 96.7 bits (239), Expect = 1e-20
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 10/194 (5%)
Query: 11 DEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRL--IAVILGILCLVILVIAVVLGTM- 67
DEDGY L+ ++ I+ V ++ R + + C ++ + + GT
Sbjct: 3 DEDGYITLNIKTRKPALISAVMQRNYLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFK 62
Query: 68 GVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSS 127
G SPC NW Y SCY F +W+ SK+ C + + LLKID+ N IV+ + +
Sbjct: 63 GHKCSPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRN----IVEYIKA 118
Query: 128 QPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLC 187
+ W+GLSR ++ W WEDGS S N+F+ + NC + H ++ C
Sbjct: 119 RTHLIRWVGLSRQKSNEVWKWEDGSVISENMFEF---LEDGKGNMNCAYFHNGKMHPTFC 175
Query: 188 SVPSYSICEKKFSM 201
Y +CE+K M
Sbjct: 176 ENKHYLMCERKAGM 189
>gi|194018501 C-type lectin domain family 12, member B isoform 1
[Homo sapiens]
Length = 276
Score = 84.0 bits (206), Expect = 8e-17
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 62 VVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLN-SWDGSKRQCWQLGSNLLKIDSSNELGF 120
+++ T +PCP W Y+ SCY F+ + +W S++ C S L+KIDS E F
Sbjct: 131 LIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDF 190
Query: 121 IVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVS 180
++ Q + FW+GLS + W WEDGS S +LF + Q N S C +
Sbjct: 191 LMSQPLLM-FSFFWLGLSWDSSGRSWFWEDGSVPSPSLFSTK-ELDQINGSKGCAYFQKG 248
Query: 181 VIYDQLCSVPSYSICEK 197
IY CS + ICEK
Sbjct: 249 NIYISRCSAEIFWICEK 265
Score = 31.2 bits (69), Expect = 0.62
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 33 EKGSCAASPPWRLIAVILGILCLVILVIAVVLGTM 67
++G A SP WR A+ L LCL++L+ V LG M
Sbjct: 29 KRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMM 63
>gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]
Length = 280
Score = 84.0 bits (206), Expect = 8e-17
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 72 SPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDN 131
SPC W + +CY F SW+ K C S +LKI+ +L F Q S+
Sbjct: 135 SPCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTMLKINKQEDLEFAASQSYSEFFY 194
Query: 132 SFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPS 191
S+W GL RP + WLW DG+ F+S LF I T S +CV I +I+ + C
Sbjct: 195 SYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVTSPR-SRDCVAILNGMIFSKDCKELK 253
Query: 192 YSICEKKFSM 201
+CE++ M
Sbjct: 254 RCVCERRAGM 263
Score = 35.8 bits (81), Expect = 0.025
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 2 EYHPDLENLDEDGYT--QLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILV 59
+Y + LD+DG T LH + TR A S WR +A+ L LCLV+L+
Sbjct: 4 KYSSTRDMLDDDGDTTMSLHSQGSATTRHPEPRRTEHRAPSSTWRPVALTLLTLCLVLLI 63
Query: 60 IAVVLGTM 67
LG +
Sbjct: 64 GLAALGLL 71
>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
Length = 241
Score = 82.4 bits (202), Expect = 2e-16
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 71 SSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSS-QP 129
SSPCP NWI +SCY S + W S+ C + GS LL+I+S E+ FI + +
Sbjct: 110 SSPCPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKG 169
Query: 130 DNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSV 189
+W+GLS+ WLW+DGS+ S L + ++ + C ++ + + CS
Sbjct: 170 SYDYWVGLSQDGHSGRWLWQDGSSPSPGLLPAERS---QSANQVCGYVKSNSLLSSNCST 226
Query: 190 PSYSICEK 197
Y ICEK
Sbjct: 227 WKYFICEK 234
>gi|47717092 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-B [Homo sapiens]
Length = 215
Score = 74.7 bits (182), Expect = 5e-14
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLGTMGVLSSP----CPPNWIIYEKSCYLFSMSLNSW 95
S P +LI ILGI+CL+++ V T+ V+ S CP WI Y SCY +W
Sbjct: 66 SAPEKLIVGILGIICLILMASVV---TIVVIPSRHCGHCPEEWITYSNSCYYIGKERRTW 122
Query: 96 DGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFS 155
+ S C S+LL ID+ E+ F+ S S WIG+ R + PW+ +G F
Sbjct: 123 EESLLACTSKNSSLLSIDNEEEMKFL-----SIISPSSWIGVFRNSSHHPWVTMNGLAFK 177
Query: 156 SNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKK 198
+ +N NC + V+ + C C+ K
Sbjct: 178 HEI------KDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHK 214
>gi|7262384 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-B [Homo sapiens]
Length = 215
Score = 74.7 bits (182), Expect = 5e-14
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLGTMGVLSSP----CPPNWIIYEKSCYLFSMSLNSW 95
S P +LI ILGI+CL+++ V T+ V+ S CP WI Y SCY +W
Sbjct: 66 SAPEKLIVGILGIICLILMASVV---TIVVIPSRHCGHCPEEWITYSNSCYYIGKERRTW 122
Query: 96 DGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFS 155
+ S C S+LL ID+ E+ F+ S S WIG+ R + PW+ +G F
Sbjct: 123 EESLLACTSKNSSLLSIDNEEEMKFL-----SIISPSSWIGVFRNSSHHPWVTMNGLAFK 177
Query: 156 SNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKK 198
+ +N NC + V+ + C C+ K
Sbjct: 178 HEI------KDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHK 214
>gi|75709169 killer cell lectin-like receptor subfamily C, member 2
[Homo sapiens]
Length = 231
Score = 72.4 bits (176), Expect = 2e-13
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMGVLS-------SP------------CPPNWIIY 81
PP +L A +LGI+C+V++ A VL T+ ++ SP CP WI Y
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIPFLEQNNFSPNTRTQKARHCGHCPEEWITY 124
Query: 82 EKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQ 141
SCY +W+ S C S+LL ID+ E+ F+ + S WIG+ R
Sbjct: 125 SNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSS-----WIGVFRNS 179
Query: 142 TEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKK 198
+ PW+ +G F + +N NC + V+ + C C+ K
Sbjct: 180 SHHPWVTINGLAFKHKI------KDSDNAELNCAVLQVNRLKSAQCGSSMIYHCKHK 230
>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
isoform 1 [Homo sapiens]
Length = 179
Score = 72.4 bits (176), Expect = 2e-13
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 39/182 (21%)
Query: 43 WRLIAVILGILCLVILVIAVVL--GTMGVLS-------------------SPCPPNWIIY 81
WRLI+ LGI+CL ++ +L + LS C W+ Y
Sbjct: 9 WRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQEKWVGY 68
Query: 82 EKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQ 141
+CY S +W+ S+ C S+LL++ +++EL F+ S +WIGLS +
Sbjct: 69 RCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM-----SSSQQFYWIGLSYSE 123
Query: 142 TEVPWLWEDGSTFSSNLFQIRTTATQE-----NPSPNCVWIHVSVIYDQLCSVPSYSICE 196
WLWE+GS S LF T + NP+ N + D+ C + IC+
Sbjct: 124 EHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNAL--------DESCEDKNRYICK 175
Query: 197 KK 198
++
Sbjct: 176 QQ 177
>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
isoform 1 [Homo sapiens]
Length = 179
Score = 72.4 bits (176), Expect = 2e-13
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 39/182 (21%)
Query: 43 WRLIAVILGILCLVILVIAVVL--GTMGVLS-------------------SPCPPNWIIY 81
WRLI+ LGI+CL ++ +L + LS C W+ Y
Sbjct: 9 WRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQEKWVGY 68
Query: 82 EKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQ 141
+CY S +W+ S+ C S+LL++ +++EL F+ S +WIGLS +
Sbjct: 69 RCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM-----SSSQQFYWIGLSYSE 123
Query: 142 TEVPWLWEDGSTFSSNLFQIRTTATQE-----NPSPNCVWIHVSVIYDQLCSVPSYSICE 196
WLWE+GS S LF T + NP+ N + D+ C + IC+
Sbjct: 124 EHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNAL--------DESCEDKNRYICK 175
Query: 197 KK 198
++
Sbjct: 176 QQ 177
>gi|7705574 killer cell lectin-like receptor subfamily F, member 1
[Homo sapiens]
Length = 231
Score = 72.4 bits (176), Expect = 2e-13
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 74 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133
C W+ Y+ CY FS + SW S C + S+LL I E+ FI K + N
Sbjct: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQL--NYV 171
Query: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYS 193
WIGL+ ++ W W DGS S +F I+ A + +C I S I+ + CS
Sbjct: 172 WIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKEN----SCAAIKESKIFSETCSSVFKW 227
Query: 194 ICE 196
IC+
Sbjct: 228 ICQ 230
>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
Length = 214
Score = 70.5 bits (171), Expect = 9e-13
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 44 RLIAVILGILCLVILVIAVVLGTMGVLS--SPCPPNWIIYEKSCYLFSMSLNSWDGSKRQ 101
RL+ + +L ILV+ +L + G + +PCP +W++Y + CY FS W+ ++
Sbjct: 68 RLLLGAIAVLLFAILVVMSILASKGCIKCEAPCPEDWLLYGRKCYFFSEEPRDWNTGRQY 127
Query: 102 CWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQI 161
C + L I S EL F+ K +P WIGL R E W+ +G F + F I
Sbjct: 128 CHTHEAVLAVIQSQKELEFMFKFTRREP----WIGLRRVGDEFHWV--NGDPFDPDTFTI 181
Query: 162 RTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEK 197
CV++ + + C + +C K
Sbjct: 182 AGPG-------ECVFVEPTRLVSTECLMTRPWVCSK 210
>gi|75709175 killer cell lectin-like receptor subfamily C, member 3
isoform E [Homo sapiens]
Length = 240
Score = 70.1 bits (170), Expect = 1e-12
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMGVL-------SSP------------CPPNWIIY 81
PP +L A +LGI+C+V++ A VL T+ ++ SSP CP WI Y
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIPFLEQNNSSPNARTQKARHCGHCPEEWITY 124
Query: 82 EKSCYLFSMSLNSWDGSKRQC-WQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRP 140
SCY +W+ S + C + S+LL ID+ E+ F+ + S WIG+ R
Sbjct: 125 SNSCYYIGKERRTWEESLQACASKNSSSLLCIDNEEEMKFLASILPSS-----WIGVFRN 179
Query: 141 QTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLC 187
+ PW+ +G F + ++ NC +HV + C
Sbjct: 180 SSHHPWVTINGLAFKHEI------KDSDHAERNCAMLHVRGLISDQC 220
>gi|75709177 killer cell lectin-like receptor subfamily C, member 3
isoform H [Homo sapiens]
Length = 257
Score = 70.1 bits (170), Expect = 1e-12
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMGVL-------SSP------------CPPNWIIY 81
PP +L A +LGI+C+V++ A VL T+ ++ SSP CP WI Y
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIPFLEQNNSSPNARTQKARHCGHCPEEWITY 124
Query: 82 EKSCYLFSMSLNSWDGSKRQC-WQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRP 140
SCY +W+ S + C + S+LL ID+ E+ F+ + S WIG+ R
Sbjct: 125 SNSCYYIGKERRTWEESLQACASKNSSSLLCIDNEEEMKFLASILPSS-----WIGVFRN 179
Query: 141 QTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLC 187
+ PW+ +G F + ++ NC +HV + C
Sbjct: 180 SSHHPWVTINGLAFKHEI------KDSDHAERNCAMLHVRGLISDQC 220
>gi|4502681 CD69 molecule [Homo sapiens]
Length = 199
Score = 69.7 bits (169), Expect = 2e-12
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 45 LIAVILGILCLVILVIAVVLGTMGVLSSP---------------CPPNWIIYEKSCYLFS 89
++ ++ ++ + IL+IA++ ++G + P C +W+ Y++ CY S
Sbjct: 41 VLCAVMNVVFITILIIALIALSVGQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFIS 100
Query: 90 MSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWE 149
SW ++ C + G+ L IDS ++ F+ + + W+GL + + PW W
Sbjct: 101 TVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGRE---EHWVGLKK-EPGHPWKWS 156
Query: 150 DGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKF 199
+G F +N F + S CV++ + + C Y IC K +
Sbjct: 157 NGKEF-NNWFNV-------TGSDKCVFLKNTEVSSMECEKNLYWICNKPY 198
>gi|169234653 NKG2-D type II integral membrane protein [Homo
sapiens]
Length = 216
Score = 69.7 bits (169), Expect = 2e-12
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 27/188 (14%)
Query: 27 RIAVVSEKGSCAASPPWR--LIAVILGILCLVILVI--AVVLGTM----------GVLSS 72
R VV K ASP + IAV +GI ++++ I AV L ++
Sbjct: 38 RCPVVKSKCRENASPFFFCCFIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCG 97
Query: 73 PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNS 132
PCP NWI Y+ +CY F +W S+ C ++LLK+ S + ++K V S
Sbjct: 98 PCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQD-LLKLVKSY---- 152
Query: 133 FWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVI--YDQLCSVP 190
W+GL T W WEDGS S NL I E +C ++ S Y + CS P
Sbjct: 153 HWMGLVHIPTNGSWQWEDGSILSPNLLTI-----IEMQKGDCA-LYASSFKGYIENCSTP 206
Query: 191 SYSICEKK 198
+ IC ++
Sbjct: 207 NTYICMQR 214
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 68.6 bits (166), Expect = 4e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 74 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 222 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 280
Query: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 191
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 281 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 339
Query: 192 YSICEK 197
Y IC+K
Sbjct: 340 YWICKK 345
>gi|223278339 C-type lectin domain family 4, member M isoform 7
[Homo sapiens]
Length = 263
Score = 68.6 bits (166), Expect = 4e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 74 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 132 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 190
Query: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 191
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 191 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 249
Query: 192 YSICEK 197
Y IC+K
Sbjct: 250 YWICKK 255
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 68.6 bits (166), Expect = 4e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 74 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 244 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 302
Query: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 191
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 303 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 361
Query: 192 YSICEK 197
Y IC+K
Sbjct: 362 YWICKK 367
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 68.6 bits (166), Expect = 4e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 74 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 217 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 275
Query: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 191
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 276 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 334
Query: 192 YSICEK 197
Y IC+K
Sbjct: 335 YWICKK 340
>gi|47717094 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 68.6 bits (166), Expect = 4e-12
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 30/178 (16%)
Query: 40 SPPWRLIAVILGILCLVIL--VIAVVLGTMGVLS-----------------SPCPPNWII 80
S P +LI ILGI+CL+++ V+ +V+ ++ CP WI
Sbjct: 66 SAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCPEEWIT 125
Query: 81 YEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRP 140
Y SCY +W+ S C S+LL ID+ E+ F+ S S WIG+ R
Sbjct: 126 YSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFL-----SIISPSSWIGVFRN 180
Query: 141 QTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKK 198
+ PW+ +G F + +N NC + V+ + C C+ K
Sbjct: 181 SSHHPWVTMNGLAFKHEI------KDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHK 232
>gi|4504881 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 68.6 bits (166), Expect = 4e-12
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 30/178 (16%)
Query: 40 SPPWRLIAVILGILCLVIL--VIAVVLGTMGVLS-----------------SPCPPNWII 80
S P +LI ILGI+CL+++ V+ +V+ ++ CP WI
Sbjct: 66 SAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCPEEWIT 125
Query: 81 YEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRP 140
Y SCY +W+ S C S+LL ID+ E+ F+ S S WIG+ R
Sbjct: 126 YSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFL-----SIISPSSWIGVFRN 180
Query: 141 QTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKK 198
+ PW+ +G F + +N NC + V+ + C C+ K
Sbjct: 181 SSHHPWVTMNGLAFKHEI------KDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHK 232
>gi|223278350 C-type lectin domain family 4, member M isoform 8
[Homo sapiens]
Length = 376
Score = 68.6 bits (166), Expect = 4e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 74 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 245 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 303
Query: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 191
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 304 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 362
Query: 192 YSICEK 197
Y IC+K
Sbjct: 363 YWICKK 368
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,436,948
Number of Sequences: 37866
Number of extensions: 349102
Number of successful extensions: 1189
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 945
Number of HSP's gapped (non-prelim): 164
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.