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Search of human proteins with 13376431
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13376431 chromosome 10 open reading frame 97 [Homo sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13376431 chromosome 10 open reading frame 97 [Homo sapiens] 907 0.0
gi|93102405 hypothetical protein LOC84182 [Homo sapiens] 110 3e-24
gi|239753703 PREDICTED: chromosome 3 open reading frame 76 [Homo... 78 1e-14
gi|239748273 PREDICTED: chromosome 3 open reading frame 76 [Homo... 78 1e-14
gi|239742174 PREDICTED: chromosome 3 open reading frame 76 [Homo... 78 1e-14
gi|32698884 calcium binding protein 7 [Homo sapiens] 40 0.004
gi|215983090 guanylate cyclase activator 1C [Homo sapiens] 35 0.11
gi|4757902 caltractin [Homo sapiens] 35 0.14
gi|7019485 programmed cell death 6 [Homo sapiens] 33 0.68
gi|4757974 centrin 1 [Homo sapiens] 32 0.89
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 32 1.5
gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens] 31 2.0
gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens] 31 2.0
gi|239755250 PREDICTED: chromosome 10 open reading frame 112 [Ho... 31 2.6
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 30 4.4
gi|63054822 calneuron 1 isoform 2 [Homo sapiens] 30 4.4
gi|157743275 calneuron 1 isoform 1 [Homo sapiens] 30 4.4
gi|54792780 DDHD domain containing 2 [Homo sapiens] 29 7.5
gi|20127624 NADPH oxidase, EF-hand calcium binding domain 5 [Hom... 29 9.9
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 29 9.9
>gi|13376431 chromosome 10 open reading frame 97 [Homo sapiens]
Length = 445
Score = 907 bits (2345), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 MSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALEQFEGGPCAVIAPVQAF 60
MSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALEQFEGGPCAVIAPVQAF
Sbjct: 1 MSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALEQFEGGPCAVIAPVQAF 60
Query: 61 LLKKLLFSSEKSSWRDCSEEEQKELLCHTLCDILESACCDHSGSYCLVSWLRGKTTEETA 120
LLKKLLFSSEKSSWRDCSEEEQKELLCHTLCDILESACCDHSGSYCLVSWLRGKTTEETA
Sbjct: 61 LLKKLLFSSEKSSWRDCSEEEQKELLCHTLCDILESACCDHSGSYCLVSWLRGKTTEETA 120
Query: 121 SISGSPAESSCQVEHSSALAVEELGFERFHALIQKRSFRSLPELKDAVLDQYSMWGNKFG 180
SISGSPAESSCQVEHSSALAVEELGFERFHALIQKRSFRSLPELKDAVLDQYSMWGNKFG
Sbjct: 121 SISGSPAESSCQVEHSSALAVEELGFERFHALIQKRSFRSLPELKDAVLDQYSMWGNKFG 180
Query: 181 VLLFLYSVLLTKGIENIKNEIEDASEPLIDPVYGHGSQSLINLLLTGHAVSNVWDGDREC 240
VLLFLYSVLLTKGIENIKNEIEDASEPLIDPVYGHGSQSLINLLLTGHAVSNVWDGDREC
Sbjct: 181 VLLFLYSVLLTKGIENIKNEIEDASEPLIDPVYGHGSQSLINLLLTGHAVSNVWDGDREC 240
Query: 241 SGMKLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA 300
SGMKLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA
Sbjct: 241 SGMKLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA 300
Query: 301 PEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIIL 360
PEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIIL
Sbjct: 301 PEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIIL 360
Query: 361 LGPFLQEFFPDQGSSGPESFTVYHYNGLKQSNYNEKVMYVEGTAVVMGFEDPMLQTDDTP 420
LGPFLQEFFPDQGSSGPESFTVYHYNGLKQSNYNEKVMYVEGTAVVMGFEDPMLQTDDTP
Sbjct: 361 LGPFLQEFFPDQGSSGPESFTVYHYNGLKQSNYNEKVMYVEGTAVVMGFEDPMLQTDDTP 420
Query: 421 IKRCLQTKWPYIELLWTTDRSPSLN 445
IKRCLQTKWPYIELLWTTDRSPSLN
Sbjct: 421 IKRCLQTKWPYIELLWTTDRSPSLN 445
>gi|93102405 hypothetical protein LOC84182 [Homo sapiens]
Length = 757
Score = 110 bits (275), Expect = 3e-24
Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 41/308 (13%)
Query: 4 LTKELMELVWGTKSSPGLSDTIFC----RWT-QGFVFSESEGS--ALEQFEGGPCAVIAP 56
+ KE+ L++G+ FC W Q F FS + + Q +GGPC V+A
Sbjct: 411 VAKEIKTLLFGSS---------FCCFNEEWKLQSFSFSNTASLKYGIVQNKGGPCGVLAA 461
Query: 57 VQAFLLKKLLFSSEKSSWRDCSEEEQKELLCHTLCDILESACCDHSGSYCLVSWLRGKTT 116
VQ +L+KLLF + + DC++ Q T C +L A + W G
Sbjct: 462 VQGCVLQKLLFEGDSKA--DCAQGLQPSDAHRTRCLVLALAD---------IVWRAGGRE 510
Query: 117 EETASISGSPAESSCQVEHSSALAVEELGFERFHALIQKRSFRSLPELKDAVLDQYSMWG 176
+++ + S ++ + +E L H+L + L + Q+ +
Sbjct: 511 RAVVALASRTQQFSPTGKYKADGVLETL---TLHSLT---CYEDLVTFLQQSIHQFEV-- 562
Query: 177 NKFGVLLFLYSVLLTKGIENIKNEIEDASEPLIDPVYGHGSQSLINLLLTGHAVSNVWDG 236
+G +L S +L++ E I+ + + + LI +G+ +Q L+NLLLTG AVSNV++
Sbjct: 563 GPYGCILLTLSAILSRSTELIRQDFDVPTSHLIG-AHGYCTQELVNLLLTGKAVSNVFND 621
Query: 237 DRECSG-----MKLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWIVGSETHLTVF 291
E L GI ++ +GFL+L E C+VG +LK+P+FPIW+V SE+H ++
Sbjct: 622 VVELDSGDGNITLLRGIAARSDIGFLSLFEHYNMCQVGCFLKTPRFPIWVVCSESHFSIL 681
Query: 292 FAKDMALV 299
F+ L+
Sbjct: 682 FSLQPGLL 689
>gi|239753703 PREDICTED: chromosome 3 open reading frame 76 [Homo
sapiens]
Length = 360
Score = 78.2 bits (191), Expect = 1e-14
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 44/275 (16%)
Query: 43 LEQFEGGPCAVIAPVQAFLLKKLLFSSEKSSWRDC--------SEEEQKELLCHTLCDIL 94
LE +GG ++ VQ ++K LLF+ + +DC S++EQ++ L L IL
Sbjct: 39 LEVGKGGARSIQMAVQGSIIKYLLFTRKG---KDCNLGNLCEISKKEQEQALAAALAGIL 95
Query: 95 ESACCDHSGSYCLVSWLRGKTTEETASISGSPAESSCQVEHSSALAVEELGFERFHALIQ 154
+A + CLV+ E ++ +P + + F +Q
Sbjct: 96 WAAGAAQKATICLVT--------EDIYVASTP----------------DYSVDNFTERLQ 131
Query: 155 KRSFRSLPELKDAVLDQYSMWGNK--FGVLLFLYSVLLTKGIENIKNEIEDASEPLIDPV 212
F + + D + + GV+LFLYS++ ++ E ++ +++ + L+ P
Sbjct: 132 LFEFLEKEAAEKFIYDHLLCFRGEGSHGVILFLYSLIFSRTFERLQMDLDVTTTQLLQPN 191
Query: 213 YGHG--SQSLINLLLTGHAVSNVWDGDRECSGMKLL-GIHEQAAVGFLT----LMEALRY 265
G Q+++N++LTG A NV++G E + L G+ ++ VG+L E R
Sbjct: 192 AGGFLCRQAVLNMILTGRASPNVFNGCEEGKSQETLHGVLTRSDVGYLQWGKDASEDDRL 251
Query: 266 CKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA 300
+VGS LK+PK PIW+ + ++ F + L++
Sbjct: 252 SQVGSMLKTPKLPIWLCNINGNYSILFCTNRQLLS 286
>gi|239748273 PREDICTED: chromosome 3 open reading frame 76 [Homo
sapiens]
Length = 360
Score = 78.2 bits (191), Expect = 1e-14
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 44/275 (16%)
Query: 43 LEQFEGGPCAVIAPVQAFLLKKLLFSSEKSSWRDC--------SEEEQKELLCHTLCDIL 94
LE +GG ++ VQ ++K LLF+ + +DC S++EQ++ L L IL
Sbjct: 39 LEVGKGGARSIQMAVQGSIIKYLLFTRKG---KDCNLGNLCEISKKEQEQALAAALAGIL 95
Query: 95 ESACCDHSGSYCLVSWLRGKTTEETASISGSPAESSCQVEHSSALAVEELGFERFHALIQ 154
+A + CLV+ E ++ +P + + F +Q
Sbjct: 96 WAAGAAQKATICLVT--------EDIYVASTP----------------DYSVDNFTERLQ 131
Query: 155 KRSFRSLPELKDAVLDQYSMWGNK--FGVLLFLYSVLLTKGIENIKNEIEDASEPLIDPV 212
F + + D + + GV+LFLYS++ ++ E ++ +++ + L+ P
Sbjct: 132 LFEFLEKEAAEKFIYDHLLCFRGEGSHGVILFLYSLIFSRTFERLQMDLDVTTTQLLQPN 191
Query: 213 YGHG--SQSLINLLLTGHAVSNVWDGDRECSGMKLL-GIHEQAAVGFLT----LMEALRY 265
G Q+++N++LTG A NV++G E + L G+ ++ VG+L E R
Sbjct: 192 AGGFLCRQAVLNMILTGRASPNVFNGCEEGKSQETLHGVLTRSDVGYLQWGKDASEDDRL 251
Query: 266 CKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA 300
+VGS LK+PK PIW+ + ++ F + L++
Sbjct: 252 SQVGSMLKTPKLPIWLCNINGNYSILFCTNRQLLS 286
>gi|239742174 PREDICTED: chromosome 3 open reading frame 76 [Homo
sapiens]
Length = 360
Score = 78.2 bits (191), Expect = 1e-14
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 44/275 (16%)
Query: 43 LEQFEGGPCAVIAPVQAFLLKKLLFSSEKSSWRDC--------SEEEQKELLCHTLCDIL 94
LE +GG ++ VQ ++K LLF+ + +DC S++EQ++ L L IL
Sbjct: 39 LEVGKGGARSIQMAVQGSIIKYLLFTRKG---KDCNLGNLCEISKKEQEQALAAALAGIL 95
Query: 95 ESACCDHSGSYCLVSWLRGKTTEETASISGSPAESSCQVEHSSALAVEELGFERFHALIQ 154
+A + CLV+ E ++ +P + + F +Q
Sbjct: 96 WAAGAAQKATICLVT--------EDIYVASTP----------------DYSVDNFTERLQ 131
Query: 155 KRSFRSLPELKDAVLDQYSMWGNK--FGVLLFLYSVLLTKGIENIKNEIEDASEPLIDPV 212
F + + D + + GV+LFLYS++ ++ E ++ +++ + L+ P
Sbjct: 132 LFEFLEKEAAEKFIYDHLLCFRGEGSHGVILFLYSLIFSRTFERLQMDLDVTTTQLLQPN 191
Query: 213 YGHG--SQSLINLLLTGHAVSNVWDGDRECSGMKLL-GIHEQAAVGFLT----LMEALRY 265
G Q+++N++LTG A NV++G E + L G+ ++ VG+L E R
Sbjct: 192 AGGFLCRQAVLNMILTGRASPNVFNGCEEGKSQETLHGVLTRSDVGYLQWGKDASEDDRL 251
Query: 266 CKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA 300
+VGS LK+PK PIW+ + ++ F + L++
Sbjct: 252 SQVGSMLKTPKLPIWLCNINGNYSILFCTNRQLLS 286
>gi|32698884 calcium binding protein 7 [Homo sapiens]
Length = 215
Score = 40.0 bits (92), Expect = 0.004
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 301 PEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIIL 360
PE E+ R F+ +D + NGFI L M++L + + + ++ +LD +G G +
Sbjct: 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
Query: 361 LGPFLQEFFPDQGSSG-PESF 380
F+ P +SG PE F
Sbjct: 91 FEEFVTLLGPKLSTSGIPEKF 111
>gi|215983090 guanylate cyclase activator 1C [Homo sapiens]
Length = 209
Score = 35.4 bits (80), Expect = 0.11
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 292 FAKDMALVAPEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKAL------DLVSDPEYIN 345
F + L+ E ++ + F+ YD + NG I + L D+ A+ +S E+IN
Sbjct: 77 FIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFIN 136
Query: 346 LMKNKLDPEGLGIILLGPFLQEFFPDQ 372
L+ +K+D G + L F+ DQ
Sbjct: 137 LVFHKIDINNDGELTLEEFINGMAKDQ 163
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 35.0 bits (79), Expect = 0.14
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 302 EAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIILL 361
E ++ R F +D + G I L+ M+AL E I M +++D EG G +
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Query: 362 GPFL 365
G FL
Sbjct: 87 GDFL 90
>gi|7019485 programmed cell death 6 [Homo sapiens]
Length = 191
Score = 32.7 bits (73), Expect = 0.68
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 309 RRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIILLGPFLQ 366
+ VF+TYD +++G I + L+ + ++ +++ K D +G G I F+Q
Sbjct: 96 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 153
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 32.3 bits (72), Expect = 0.89
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 302 EAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIILL 361
E ++ R F +D + +G I L+ M+AL E + M +++D EG G I
Sbjct: 27 EDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISF 86
Query: 362 GPFL 365
FL
Sbjct: 87 NDFL 90
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 31.6 bits (70), Expect = 1.5
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 22 SDTIFCRWTQGF---VFSESEGSALEQFEGGPCAVIAPVQAFLLKKLLFSSEKSSWRDCS 78
S T+ C W Q F F + A Q +G + +Q F+L +LL E +
Sbjct: 75 STTLLCLWKQPFHVSAFPVTASLAFRQSQGAGQHLYKDLQPFILLRLLMPEETQTQDQPM 134
Query: 79 EEEQKE 84
EEE+ E
Sbjct: 135 EEEEVE 140
>gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens]
Length = 773
Score = 31.2 bits (69), Expect = 2.0
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 296 MALVAPEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDP 353
++L+ P ++ +F+ YD + NGF+ S LE+++ + V+ EY+ +L+P
Sbjct: 142 LSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIISQMMHVA--EYLEWDVTELNP 197
>gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens]
Length = 804
Score = 31.2 bits (69), Expect = 2.0
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 296 MALVAPEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDP 353
++L+ P ++ +F+ YD + NGF+ S LE+++ + V+ EY+ +L+P
Sbjct: 142 LSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIISQMMHVA--EYLEWDVTELNP 197
>gi|239755250 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1542
Score = 30.8 bits (68), Expect = 2.6
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 9/139 (6%)
Query: 89 TLCDILES-----ACCDHSGSYCLVSWLRGKTTEETASISGSPAESSCQVEHSSALAVEE 143
TLC+IL S + CD + C W + + I S +E S EH +
Sbjct: 4 TLCEILSSMKIWVSKCDFEANSC--DWFEAISGDHFDWIRSSQSELSADFEHQAPPRDHS 61
Query: 144 LGFERFHALIQKRSFRSLPELKDAVLDQYSMWGNKFGVLLFLYSVLLTKGIENIKNEIED 203
L + H + + SL ++ +S G + + Y+ L+ G ++ +E+
Sbjct: 62 LNASQGHFMFILKKSSSLWQVAKLQSPTFSQTGPGCILSFWFYNYGLSVGAAELQLHMEN 121
Query: 204 ASEPLI--DPVYGHGSQSL 220
+ + + +Y G Q L
Sbjct: 122 SHDSTVIWRVLYNQGKQWL 140
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 30.0 bits (66), Expect = 4.4
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 299 VAPEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGI 358
V + + R VF D + +GF+ +ED ++ V E + + LDP GLG+
Sbjct: 198 VGSQEDGPRLRAVFDALDGDGDGFVR---IEDFIQ-FATVYGAEQVKDLTKYLDPSGLGV 253
Query: 359 ILLGPFLQ 366
I F Q
Sbjct: 254 ISFEDFYQ 261
>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
Length = 219
Score = 30.0 bits (66), Expect = 4.4
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 306 EQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIILLGPFL 365
++ R F+ D + NGFI L M++L + + ++ +LD +G G + F+
Sbjct: 39 DEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFM 98
Query: 366 QEFFPDQGSS 375
P SS
Sbjct: 99 TILGPKLVSS 108
>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
Length = 261
Score = 30.0 bits (66), Expect = 4.4
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 306 EQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIILLGPFL 365
++ R F+ D + NGFI L M++L + + ++ +LD +G G + F+
Sbjct: 81 DEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFM 140
Query: 366 QEFFPDQGSS 375
P SS
Sbjct: 141 TILGPKLVSS 150
>gi|54792780 DDHD domain containing 2 [Homo sapiens]
Length = 711
Score = 29.3 bits (64), Expect = 7.5
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 114 KTTEETASISGSPAE--SSCQVEHSSALAVEEL---------GFERFHALIQKRSFRSLP 162
+T EET + S +E S E +S EE+ G +R ++Q++ S
Sbjct: 613 ETPEETEAEPESTSEKPSDVNTEETSVAVKEEVLPINVGMLNGGQRIDYVLQEKPIESFN 672
Query: 163 ELKDAVLDQYSMWGNKFGVLLFLYSVLLTKGI 194
E A+ W ++ VLL L + T+GI
Sbjct: 673 EYLFALQSHLCYWESEDTVLLVLKEIYQTQGI 704
>gi|20127624 NADPH oxidase, EF-hand calcium binding domain 5 [Homo
sapiens]
Length = 747
Score = 28.9 bits (63), Expect = 9.9
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 110 WLRGKTTEETASISGSPAESSCQVEHSSALAVEELGF-ERFHALI--QKRSFRSLPELKD 166
WLR T++ +I+G E S Q E +AL V+E F ERF AL + +L EL++
Sbjct: 9 WLRW-VTQQFKTIAGEDGEISLQ-EFKAALHVKESFFAERFFALFDSDRSGTITLQELQE 66
Query: 167 AVLDQYSMWGNKFGVLLFLYSV 188
A+ + G+ L FL+ V
Sbjct: 67 AL--TLLIHGSPMDKLKFLFQV 86
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 28.9 bits (63), Expect = 9.9
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 43 LEQFE-GGPCAVIAPVQAFLLKKLLFSSEKSSWRDCSEEEQKELL---------CHTLCD 92
LE FE G C + P Q+ + + E SSW +K +L +CD
Sbjct: 1735 LEDFELEGVCQL--PDQSPPRNSMPKAEEASSWGQFGLSSRKRVLLAKEEADRGAKRICD 1792
Query: 93 ILESACCDHS--GSYCLVSWLRGKTTEETASISGSPAESSCQVEHS-SALAVEEL 144
+ E + S GS +W T +E +SGS SC V SA A++ L
Sbjct: 1793 LREDSEVSKSKEGSPSWSAWQLPSTGDEEVFVSGSTPPPSCAVRSCLSASALQAL 1847
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,960,589
Number of Sequences: 37866
Number of extensions: 824939
Number of successful extensions: 1810
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1778
Number of HSP's gapped (non-prelim): 27
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.