Guide to the Human Genome
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Search of human proteins with 5174387

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5174387 prominin 1 isoform 1 [Homo sapiens]
         (865 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5174387 prominin 1 isoform 1 [Homo sapiens]                       1735   0.0  
gi|224994189 prominin 1 isoform 2 [Homo sapiens]                     1711   0.0  
gi|224994191 prominin 1 isoform 2 [Homo sapiens]                     1711   0.0  
gi|224994193 prominin 1 isoform 7 [Homo sapiens]                     1674   0.0  
gi|224994195 prominin 1 isoform 6 [Homo sapiens]                     1659   0.0  
gi|224994197 prominin 1 isoform 5 [Homo sapiens]                     1650   0.0  
gi|224994199 prominin 1 isoform 4 [Homo sapiens]                     1634   0.0  
gi|21389623 prominin 2 [Homo sapiens]                                 353   3e-97
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              46   2e-04
gi|45269141 multimerin 1 [Homo sapiens]                                42   0.003
gi|9910266 kinesin family member 15 [Homo sapiens]                     39   0.016
gi|7662160 hypothetical protein LOC9813 [Homo sapiens]                 39   0.021
gi|17136143 olfactomedin related ER localized protein isoform 1 ...    39   0.021
gi|75677574 cell cycle progression 1 isoform 2 [Homo sapiens]          37   0.10 
gi|75677585 cell cycle progression 1 isoform 1 [Homo sapiens]          37   0.10 
gi|23397464 gap junction protein, beta 4 [Homo sapiens]                36   0.13 
gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens]    35   0.23 
gi|55770834 centromere protein F [Homo sapiens]                        35   0.23 
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]                     35   0.39 
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]                     35   0.39 
gi|94538345 keratin 35 [Homo sapiens]                                  35   0.39 
gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens]    34   0.51 
gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens]    34   0.51 
gi|53988385 tweety 2 isoform 1 [Homo sapiens]                          34   0.67 
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    34   0.67 
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]    32   2.5  
gi|169218008 PREDICTED: similar to anaphase-promoting complex su...    32   2.5  
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    32   2.5  
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    32   2.5  
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    32   2.5  

>gi|5174387 prominin 1 isoform 1 [Homo sapiens]
          Length = 865

 Score = 1735 bits (4494), Expect = 0.0
 Identities = 865/865 (100%), Positives = 865/865 (100%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME 840
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME
Sbjct: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME 840

Query: 841 NGNNGYHKDHVYGIHNPVMTSPSQH 865
           NGNNGYHKDHVYGIHNPVMTSPSQH
Sbjct: 841 NGNNGYHKDHVYGIHNPVMTSPSQH 865


>gi|224994189 prominin 1 isoform 2 [Homo sapiens]
          Length = 856

 Score = 1711 bits (4430), Expect = 0.0
 Identities = 856/865 (98%), Positives = 856/865 (98%), Gaps = 9/865 (1%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK         IVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME 840
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME
Sbjct: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME 831

Query: 841 NGNNGYHKDHVYGIHNPVMTSPSQH 865
           NGNNGYHKDHVYGIHNPVMTSPSQH
Sbjct: 832 NGNNGYHKDHVYGIHNPVMTSPSQH 856


>gi|224994191 prominin 1 isoform 2 [Homo sapiens]
          Length = 856

 Score = 1711 bits (4430), Expect = 0.0
 Identities = 856/865 (98%), Positives = 856/865 (98%), Gaps = 9/865 (1%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK         IVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME 840
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME
Sbjct: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKNME 831

Query: 841 NGNNGYHKDHVYGIHNPVMTSPSQH 865
           NGNNGYHKDHVYGIHNPVMTSPSQH
Sbjct: 832 NGNNGYHKDHVYGIHNPVMTSPSQH 856


>gi|224994193 prominin 1 isoform 7 [Homo sapiens]
          Length = 842

 Score = 1674 bits (4336), Expect = 0.0
 Identities = 838/838 (100%), Positives = 838/838 (100%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 838
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN
Sbjct: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 838


>gi|224994195 prominin 1 isoform 6 [Homo sapiens]
          Length = 834

 Score = 1659 bits (4295), Expect = 0.0
 Identities = 830/830 (100%), Positives = 830/830 (100%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD 830
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD
Sbjct: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD 830


>gi|224994197 prominin 1 isoform 5 [Homo sapiens]
          Length = 833

 Score = 1650 bits (4272), Expect = 0.0
 Identities = 829/838 (98%), Positives = 829/838 (98%), Gaps = 9/838 (1%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK         IVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 838
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN
Sbjct: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDDVETIPMKN 829


>gi|224994199 prominin 1 isoform 4 [Homo sapiens]
          Length = 825

 Score = 1634 bits (4231), Expect = 0.0
 Identities = 821/830 (98%), Positives = 821/830 (98%), Gaps = 9/830 (1%)

Query: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60
           MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH
Sbjct: 1   MALVLGSLLLLGLCGNSFSGGQPSSTDAPKAWNYELPATNYETQDSHKAGPIGILFELVH 60

Query: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGIILCCVLGLLFI 120
           IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK         IVYYEAGIILCCVLGLLFI
Sbjct: 61  IFLYVVQPRDFPEDTLRKFLQKAYESKIDYDK---------IVYYEAGIILCCVLGLLFI 111

Query: 121 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 180
           ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN
Sbjct: 112 ILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVAN 171

Query: 181 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 240
           HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG
Sbjct: 172 HQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGG 231

Query: 241 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 300
           ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS
Sbjct: 232 ILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRS 291

Query: 301 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 360
           SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG
Sbjct: 292 SLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQG 351

Query: 361 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 420
           YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI
Sbjct: 352 YQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAFSVYVNNTESYI 411

Query: 421 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 480
           HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG
Sbjct: 412 HRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRGCVSNTGG 471

Query: 481 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 540
           VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY
Sbjct: 472 VFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLDTPYLLNEDWEY 531

Query: 541 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 600
           YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES
Sbjct: 532 YLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINEHTGSISSELES 591

Query: 601 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 660
           LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS
Sbjct: 592 LKVNLNIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLLSFAYDLEAKANS 651

Query: 661 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 720
           LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL
Sbjct: 652 LPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNGLLERVTRILASL 711

Query: 721 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 780
           DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD
Sbjct: 712 DFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASCKPVATALDTAVD 771

Query: 781 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD 830
           VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD
Sbjct: 772 VFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYRRMDSEDVYDD 821


>gi|21389623 prominin 2 [Homo sapiens]
          Length = 834

 Score =  353 bits (907), Expect = 3e-97
 Identities = 205/772 (26%), Positives = 387/772 (50%), Gaps = 23/772 (2%)

Query: 50  GPIGILFELVHIFLYVVQPRDFPEDTLRKFLQKAYESKIDYDKPETVILGLKIVYYEAGI 109
           G +  L+  V  FL VVQ   FP + ++  L +    K++           ++V YEAG 
Sbjct: 58  GLLDSLYGTVRRFLSVVQLNPFPSELVKALLNELASVKVN-----------EVVRYEAGY 106

Query: 110 ILCCVLGLLFIILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICIII 169
           ++C V+  L+++L+P  G  FC CRC  +CGG +    K      R    + LL+  +++
Sbjct: 107 VVCAVIAGLYLLLVPTAGLCFCCCRCHRRCGGRVKTEHKALA-CERAALMVFLLLTTLLL 165

Query: 170 SIGIFYGFVANHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTD 229
            IG+   FV N +   ++  S +        L  L+++ P++++ +  Q++  +++   +
Sbjct: 166 LIGVVCAFVTNQRTHEQMGPSIEAMPETLLSLWGLVSDVPQELQAVAQQFSLPQEQVSEE 225

Query: 230 LNSINSVLGGGILDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSS 289
           L+ +   +G  I  +LR ++ P+L  + S+   ++ +   L+ +N+T+  L      L  
Sbjct: 226 LDGVGVSIGSAIHTQLRSSVYPLLAAVGSLGQVLQVSVHHLQTLNATVVELQAGQQDLEP 285

Query: 290 SLTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVL 349
           ++   +  L   L +  C        C         L    +  Q+P VD  L  +  V 
Sbjct: 286 AIREHRDRLLELLQEARC-----QGDCAGALSWARTLELGADFSQVPSVDHVLHQLKGVP 340

Query: 350 RTDLDGLVQQGYQSLNDIPDRVQRQTTTVVAGIKRVLNSIGSDIDNVTQRLPIQDILSAF 409
             +   +VQ+   + N +P     QT++VV  +K+ +      +  + +  P  +  S +
Sbjct: 341 EANFSSMVQEENSTFNALPALAAMQTSSVVQELKKAVAQQPEGVRTLAEGFPGLEAASRW 400

Query: 410 SVYVNNTESYIHRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATP 469
           +  +   E      L  ++ Y++Y W+ G V+CS++  +V+   LGL  G+ G      P
Sbjct: 401 AQALQEVEESSRPYLQEVQRYETYRWIVGCVLCSVVLFVVLCNLLGLNLGIWGLSARDDP 460

Query: 470 TTRGCVSNTGGVFLMVGVGLSFLFCWILMIIVVLTFVFGANVEKLICEPYTSKELFRVLD 529
           +        G  FLM GVGLSFLF   L+++V  TF+ G NV+ L+C  + + ELF   D
Sbjct: 461 SHPEAKGEAGARFLMAGVGLSFLFAAPLILLVFATFLVGGNVQTLVCRSWENGELFEFAD 520

Query: 530 TPYLLNEDWEYYLSGKLFNKSKMKLTFEQVYSDCKKNRGTYGTLHLQNSFNISEHLNINE 589
           TP  L          +L    K  ++  Q Y  CK+    +  L L +S+++ EHL+IN+
Sbjct: 521 TPGNLPPSMNL---SQLLGLRK-NISIHQAYQQCKEGAALWTVLQLNDSYDLEEHLDINQ 576

Query: 590 HTGSISSELESLKVNL-NIFLLGAAGRKNLQDFAACGIDRMNYDSYLAQTGKSPAGVNLL 648
           +T  +  EL+SLKV+  ++ LL +A R++L+   + G+ R++Y  +L Q  +     ++ 
Sbjct: 577 YTNKLRQELQSLKVDTQSLDLLSSAARRDLEALQSSGLQRIHYPDFLVQIQRPVVKTSME 636

Query: 649 SFAYDLEAKANSLPPGNLRNSLKRDAQTIKTIHQQRVLPIEQSLSTLYQSVKILQRTGNG 708
             A +L+  A +     L   L+ +AQ ++ +HQ++V+P +  ++ L  SV+ L+ +   
Sbjct: 637 QLAQELQGLAQAQDNSVLGQRLQEEAQGLRNLHQEKVVPQQSLVAKLNLSVRALESSAPN 696

Query: 709 LLERVTRILASLDFAQNFITNNTSSVIIEETKKYGRTIIGYFEHYLQWIEFSISEKVASC 768
           L    + +LA++ + +  +    + ++   ++ +    +GYF  Y+ W+   +++++A+C
Sbjct: 697 LQLETSDVLANVTYLKGELPAWAARILRNVSECFLAREMGYFSQYVAWVREEVTQRIATC 756

Query: 769 KPVATALDTAVDVFLCSYIIDPLNLFWFGIGKATVFLLPALIFAVKLAKYYR 820
           +P++ ALD +  V LC  + DP N FWF +   T FL+P++IFAVK +KY+R
Sbjct: 757 QPLSGALDNS-RVILCDMMADPWNAFWFCLAWCTFFLIPSIIFAVKTSKYFR 807


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 8/128 (6%)

Query: 255 EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSE 314
           E+K+    I   K+  E M   +++L +  TQL + L  V+  L+   ++  C +  S E
Sbjct: 540 ELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEE 599

Query: 315 TCNSIRLSLSQLN--------SNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLND 366
            CN++R  +   N         N  L++    +++  NV  +    L+  ++   Q   +
Sbjct: 600 NCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGE 659

Query: 367 IPDRVQRQ 374
           I D  Q++
Sbjct: 660 ITDTYQKE 667


>gi|45269141 multimerin 1 [Homo sapiens]
          Length = 1228

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 10/155 (6%)

Query: 187 IKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAF--TDLNSINSVLGGGILDR 244
           I R  KL  SNF+ +  + NET  Q++      +  ++K    T ++         I  +
Sbjct: 809 IPRDEKLNQSNFQKMYQMFNETTSQVRKYQQNMSHLEEKLLLTTKISKNFETRLQDIESK 868

Query: 245 LRPNIIPVLDEIKSMATAIKETKEA--LENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSL 302
           +   +IP    +K  +    E  +A  L+ +NS  K+L  +S  LS +      SL  +L
Sbjct: 869 VTQTLIPYYISVKKGSVVTNERDQALQLQVLNSRFKALEAKSIHLSINF----FSLNKTL 924

Query: 303 NDPLCLVHPSSETCNSIRLSLSQ--LNSNPELRQL 335
           ++ L + H +S + + +  ++ +   +S P+++ L
Sbjct: 925 HEVLTMCHNASTSVSELNATIPKWIKHSLPDIQLL 959


>gi|9910266 kinesin family member 15 [Homo sapiens]
          Length = 1388

 Score = 39.3 bits (90), Expect = 0.016
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 187  IKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKD--KAFTDLNSINSVLGGGILDR 244
            IKR ++ +D N  D + L NE  E IK  LA+    ++  K   DL  + S L    ++ 
Sbjct: 1225 IKRQKENSDQNHPDNQQLKNEQEESIKERLAKSKIVEEMLKMKADLEEVQSALYNKEMEC 1284

Query: 245  LRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVK 295
            LR     + DE++   T   +  +  E + S L+ ++++  + S  +  ++
Sbjct: 1285 LR-----MTDEVERTQTLESKAFQEKEQLRSKLEEMYEERERTSQEMEMLR 1330


>gi|7662160 hypothetical protein LOC9813 [Homo sapiens]
          Length = 495

 Score = 38.9 bits (89), Expect = 0.021
 Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 34/264 (12%)

Query: 151 GPFLRKC------FAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSN----FKD 200
           G +LR C          +L  C++  +G+ +  VA  +    +K   +  +SN    F++
Sbjct: 63  GDYLRCCKICYPLCGFVILAACVVACVGLVWMQVALKEDLDALKEKFRTMESNQKSSFQE 122

Query: 201 LRTLLNETPEQIKYI--LAQYNTTKDKAFTDLNSINSVLG--GGILDRLRPNIIPVLDEI 256
           +  L  E   + K +  +       +K + ++  +N  +      ++ L+ N+    D I
Sbjct: 123 IPKLNEELLSKQKQLEKIESGEMGLNKVWINITEMNKQISLLTSAVNHLKANVKSAADLI 182

Query: 257 KSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTS---LRSSLNDPLCLVHPSS 313
            S+ T ++  ++++ ++ +TL S+H     L  ++   K +   L+S +N       P S
Sbjct: 183 -SLPTTVEGLQKSVASIGNTLNSVHLAVEALQKTVDEHKKTMELLQSDMNQHFLKETPGS 241

Query: 314 ETCNSIRLSLSQLNSNPELRQLPP----VDAELDNVNNVLRTDLDGLVQQGYQSLNDIPD 369
                   + S+L++      L      +   L+ VN+ L          GYQ  ND+  
Sbjct: 242 NQIIPSPSATSELDNKTHSENLKQDILYLHNSLEEVNSAL---------VGYQRQNDLKL 292

Query: 370 RVQRQTTTVVAGIKRVLNSIGSDI 393
               +T   V+ + + +N I SD+
Sbjct: 293 EGMNET---VSNLTQRVNLIESDV 313


>gi|17136143 olfactomedin related ER localized protein isoform 1
           [Homo sapiens]
          Length = 467

 Score = 38.9 bits (89), Expect = 0.021
 Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 6/71 (8%)

Query: 242 LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQ-----STQLSSSLTSVKT 296
           +D LRP +IPVL+E K+ A  + + KE ++N+ S L  L ++       +L S +++++ 
Sbjct: 140 MDELRP-LIPVLEEYKADAKLVLQFKEEVQNLTSVLNELQEEIGAYDYDELQSRVSNLEE 198

Query: 297 SLRSSLNDPLC 307
            LR+ +    C
Sbjct: 199 RLRACMQKLAC 209


>gi|75677574 cell cycle progression 1 isoform 2 [Homo sapiens]
          Length = 757

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 20/158 (12%)

Query: 142 EMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSNFKDL 201
           E+ +RQ  +G  L KC  ++L VI I +  G FYG +   Q++ R +  RK+ +    D+
Sbjct: 205 ELSKRQFSSG--LNKCVILAL-VIAISMGFGHFYGTI---QIQKRQQLVRKIHEDELNDM 258

Query: 202 RTLLNETPEQ----IKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIK 257
           +  L++  ++    I Y   + N  +    T+   ++        +  + N+     E +
Sbjct: 259 KDYLSQCQQEQESFIDYKSLKENLARCWTLTEAEKMS-------FETQKTNL---ATENQ 308

Query: 258 SMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVK 295
            +  ++++ ++AL ++   L  L +Q   L    TS +
Sbjct: 309 YLRVSLEKEEKALSSLQEELNKLREQIRILEDKGTSTE 346


>gi|75677585 cell cycle progression 1 isoform 1 [Homo sapiens]
          Length = 757

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 20/158 (12%)

Query: 142 EMHQRQKENGPFLRKCFAISLLVICIIISIGIFYGFVANHQVRTRIKRSRKLADSNFKDL 201
           E+ +RQ  +G  L KC  ++L VI I +  G FYG +   Q++ R +  RK+ +    D+
Sbjct: 205 ELSKRQFSSG--LNKCVILAL-VIAISMGFGHFYGTI---QIQKRQQLVRKIHEDELNDM 258

Query: 202 RTLLNETPEQ----IKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIK 257
           +  L++  ++    I Y   + N  +    T+   ++        +  + N+     E +
Sbjct: 259 KDYLSQCQQEQESFIDYKSLKENLARCWTLTEAEKMS-------FETQKTNL---ATENQ 308

Query: 258 SMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVK 295
            +  ++++ ++AL ++   L  L +Q   L    TS +
Sbjct: 309 YLRVSLEKEEKALSSLQEELNKLREQIRILEDKGTSTE 346


>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
          Length = 266

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 414 NNTESYIHRNLPTLEEYDSYWWLGGLVICSLLTLIVIFYYLGLLCGVCGYDRHATPTTRG 473
           +  + YI R  PT ++  +Y+ +    IC LL L  +FY +G  C      RH  P  R 
Sbjct: 171 HTVDCYISR--PTEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRE 228

Query: 474 CVSNT 478
           C+ +T
Sbjct: 229 CLPDT 233


>gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens]
          Length = 915

 Score = 35.4 bits (80), Expect = 0.23
 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 14/182 (7%)

Query: 180 NHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGG 239
           +H V  +    + L     +  R +  E    +K +  +Y   K        SI  VLG 
Sbjct: 703 DHLVEEKASLQKSLLYYESQHGRPVTKEERHIVKPLYDRYRLVKQ--MLTRASITPVLGS 760

Query: 240 GILDRLRPNIIPVLD-EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSL 298
               R    + P+++ E       IKE +E   N++S L  + + + Q+ SSL + ++ +
Sbjct: 761 PSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSSLENSESDV 820

Query: 299 RSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPE-LRQLPPVDAELDNVNNVLRTDLDGLV 357
             +  + L L          +RLS S+  S PE L QL    AE   +   LR   +   
Sbjct: 821 EEN-QEKLAL---------DLRLSSSRAASMPELLEQLWKARAEKKKLRKTLREFEEAFY 870

Query: 358 QQ 359
           QQ
Sbjct: 871 QQ 872


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 35.4 bits (80), Expect = 0.23
 Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 19/146 (13%)

Query: 245  LRPNIIPVLDEIKSMATAIKETKEA---LENMNSTLKSLHQQSTQ--------LSSSLTS 293
            L  +++ +  E +++   +++ +E    LE +NS+ +++ Q+  Q         S+++  
Sbjct: 2383 LELDVVTIRSEKENLTNELQKEQERISELEIINSSFENILQEKEQEKVQMKEKSSTAMEM 2442

Query: 294  VKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNN---VLR 350
            ++T L+  LN+ +  +H   E C +   +LS      EL +   +   LD   N   VL+
Sbjct: 2443 LQTQLKE-LNERVAALHNDQEACKAKEQNLSSQVECLELEKAQLLQG-LDEAKNNYIVLQ 2500

Query: 351  TDLDGLVQQ---GYQSLNDIPDRVQR 373
            + ++GL+Q+   G Q L    + + R
Sbjct: 2501 SSVNGLIQEVEDGKQKLEKKDEEISR 2526


>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
          Length = 1173

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 202 RTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMAT 261
           R L+ +  EQI+++ +  N  K +      ++          +L    + +  E++S+  
Sbjct: 711 RKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQR------RQQLEEQTVELSTEVQSLYR 764

Query: 262 AIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLND 304
            IK+ KE +  + +TL+   Q+  +L +   +     +  LND
Sbjct: 765 EIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLND 807


>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
          Length = 1312

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 202 RTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGILDRLRPNIIPVLDEIKSMAT 261
           R L+ +  EQI+++ +  N  K +      ++          +L    + +  E++S+  
Sbjct: 850 RKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQR------RQQLEEQTVELSTEVQSLYR 903

Query: 262 AIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLND 304
            IK+ KE +  + +TL+   Q+  +L +   +     +  LND
Sbjct: 904 EIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLND 946


>gi|94538345 keratin 35 [Homo sapiens]
          Length = 455

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 4/130 (3%)

Query: 265 ETKEALENM-NSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSL 323
           ET+ +L  +  S +  L +    L+   + ++  + S   + LCL     E  NS+R  L
Sbjct: 187 ETEVSLRQLVESDINGLRRILDDLTLCKSDLEAQVESLKEELLCLKKNHEEEVNSLRCQL 246

Query: 324 SQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQGYQSLNDIPDRVQRQTTTVVAGIK 383
                N E+   PPVD  L+ V   +R   + LV+   +   D  D    +    V    
Sbjct: 247 GD-RLNVEVDAAPPVD--LNRVLEEMRCQYETLVENNRRDAEDWLDTQSEELNQQVVSSS 303

Query: 384 RVLNSIGSDI 393
             L S  ++I
Sbjct: 304 EQLQSCQAEI 313


>gi|156142192 hypothetical protein LOC51306 isoform 3 [Homo sapiens]
          Length = 791

 Score = 34.3 bits (77), Expect = 0.51
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 232 SINSVLGGGILDRLRPNIIPVLD-EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSS 290
           SI  VLG     R    + P+++ E       IKE +E   N++S L  + + + Q+ SS
Sbjct: 629 SITPVLGSPSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSS 688

Query: 291 LTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPE-LRQLPPVDAELDNVNNVL 349
           L + ++ +  +  + L L          +RLS S+  S PE L QL    AE   +   L
Sbjct: 689 LENSESDVEEN-QEKLAL---------DLRLSSSRAASMPELLEQLWKARAEKKKLRKTL 738

Query: 350 RTDLDGLVQQ 359
           R   +   QQ
Sbjct: 739 REFEEAFYQQ 748


>gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens]
          Length = 887

 Score = 34.3 bits (77), Expect = 0.51
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 232 SINSVLGGGILDRLRPNIIPVLD-EIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSS 290
           SI  VLG     R    + P+++ E       IKE +E   N++S L  + + + Q+ SS
Sbjct: 725 SITPVLGSPSTKRRGQMLQPIIEGETAHFFEEIKEEEEDGVNLSSELGDMLKTAVQVQSS 784

Query: 291 LTSVKTSLRSSLNDPLCLVHPSSETCNSIRLSLSQLNSNPE-LRQLPPVDAELDNVNNVL 349
           L + ++ +  +  + L L          +RLS S+  S PE L QL    AE   +   L
Sbjct: 785 LENSESDVEEN-QEKLAL---------DLRLSSSRAASMPELLEQLWKARAEKKKLRKTL 834

Query: 350 RTDLDGLVQQ 359
           R   +   QQ
Sbjct: 835 REFEEAFYQQ 844


>gi|53988385 tweety 2 isoform 1 [Homo sapiens]
          Length = 534

 Score = 33.9 bits (76), Expect = 0.67
 Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 108 GIILCCVLGLLFIILMPLVGYFFCMCRCCNKCGGEMHQRQKENGPFLRKCFAISLLVICI 167
           G++    LGL  I L   V Y  C C C      +  Q ++ +   +     ++ L+ C 
Sbjct: 49  GLVAAVCLGLNLIFL---VAYLVCACHCRR---DDAVQTKQHHSCCITWTAVVAGLICCA 102

Query: 168 IISIGIFYGFVANHQVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQY 219
            + +G FYG    +    ++  S   A+  F  +  L++ T +++K  L Q+
Sbjct: 103 AVGVG-FYGNSETNDGAYQLMYSLDDANHTFSGIDALVSGTTQKMKVDLEQH 153


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
            transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 33.9 bits (76), Expect = 0.67
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 28/199 (14%)

Query: 578  SFNISEHL-NINEHTGSISSELESLKVNLNIFLLGAAGRKNL--QDFAACGIDRMNYDSY 634
            SF+++E +  +NE   S+  E+++LK  LN+       +K    +D       + NYD  
Sbjct: 907  SFSMTEKMVQLNEEKFSLGVEIKTLKEQLNLLSRAEEAKKEQVEEDNEVSSGLKQNYDE- 965

Query: 635  LAQTGKSPAG---VNLLSFAYDLEAKANSLPPGNLRNSLKRDAQTIKTIHQQRVLPIEQS 691
                  SPAG      L   +DL  K N      L+ +L    + +     QRV  +E+ 
Sbjct: 966  -----MSPAGQISKEELQHEFDLLKKENEQRKRKLQAALINRKELL-----QRVSRLEEE 1015

Query: 692  LSTLYQSVK---ILQRTGNGLLERVTRILASLDFAQNFITNNTSSVIIEETKKYGRTIIG 748
            L+ L    K    L  T  G +E       + ++++  +T+       +E + Y +  I 
Sbjct: 1016 LANLKDESKKEIPLSETERGEVEEDKE---NKEYSEKCVTSK-----CQEIEIYLKQTIS 1067

Query: 749  YFEHYLQWIEFSISEKVAS 767
              E  LQ I   + EK+A+
Sbjct: 1068 EKEVELQHIRKDLEEKLAA 1086


>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
          Length = 1684

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 252  VLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPL----- 306
            +L E  S    ++E   ++++ N  +KS H   TQ  S LTS    LR+S  D +     
Sbjct: 1396 MLQETVSKEAELREKLCSIQSENMMMKSEH---TQTVSQLTSQNEVLRNSFRDQVRHLQE 1452

Query: 307  ---CLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDL 353
                 V    +  + +   L QL + P  R        L N+     TDL
Sbjct: 1453 EHRKTVETLQQQLSKMEAQLFQLKNEPTTRSPVSSQQSLKNLRERRNTDL 1502


>gi|169218008 PREDICTED: similar to anaphase-promoting complex
           subunit 2 [Homo sapiens]
          Length = 430

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 17/107 (15%)

Query: 256 IKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSSLNDPLCLVHPSSET 315
           I+ + + +++++ A+E++   L    +++ Q    L S+K +L + L      +HP   T
Sbjct: 118 IEELFSIVRDSRPAIEDLKYCL----ERTDQRQQLLVSLKAALETRL------LHPGVNT 167

Query: 316 CNSIRLSLSQLNSNPELRQLPP----VDAELDNVNNVLRTDLDGLVQ 358
           C+ I L +S + +   LR L P    ++   + +   LRT  D + Q
Sbjct: 168 CDIITLYISAIKA---LRVLDPSMVILEVACEPIRRYLRTREDTVRQ 211


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 39/207 (18%), Positives = 92/207 (44%), Gaps = 21/207 (10%)

Query: 182  QVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGI 241
            Q +  ++  +K  ++  ++L++  ++         A+ N   DK     N + SV G  +
Sbjct: 1245 QAKQEVEHKKKKLEAQVQELQSKCSDGERA----RAELN---DKVHKLQNEVESVTG--M 1295

Query: 242  LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSS 301
            L+      I +  ++ S+++ +++T+E L+    T + L+  ST+L   L   + SL+  
Sbjct: 1296 LNEAEGKAIKLAKDVASLSSQLQDTQELLQ--EETRQKLN-VSTKL-RQLEEERNSLQDQ 1351

Query: 302  LNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQ-- 359
            L++ +          +++ + LS  +S  +L+        L+      + +++ L QQ  
Sbjct: 1352 LDEEMEAKQNLERHISTLNIQLS--DSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYE 1409

Query: 360  ----GYQSLNDIPDRVQRQTTTVVAGI 382
                 Y  L    +R+Q++   +V  +
Sbjct: 1410 EKAAAYDKLEKTKNRLQQELDDLVVDL 1436


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 39/207 (18%), Positives = 92/207 (44%), Gaps = 21/207 (10%)

Query: 182  QVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGI 241
            Q +  ++  +K  ++  ++L++  ++         A+ N   DK     N + SV G  +
Sbjct: 1252 QAKQEVEHKKKKLEAQVQELQSKCSDGERA----RAELN---DKVHKLQNEVESVTG--M 1302

Query: 242  LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSS 301
            L+      I +  ++ S+++ +++T+E L+    T + L+  ST+L   L   + SL+  
Sbjct: 1303 LNEAEGKAIKLAKDVASLSSQLQDTQELLQ--EETRQKLN-VSTKL-RQLEEERNSLQDQ 1358

Query: 302  LNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQ-- 359
            L++ +          +++ + LS  +S  +L+        L+      + +++ L QQ  
Sbjct: 1359 LDEEMEAKQNLERHISTLNIQLS--DSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYE 1416

Query: 360  ----GYQSLNDIPDRVQRQTTTVVAGI 382
                 Y  L    +R+Q++   +V  +
Sbjct: 1417 EKAAAYDKLEKTKNRLQQELDDLVVDL 1443


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
            sapiens]
          Length = 1945

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 39/207 (18%), Positives = 92/207 (44%), Gaps = 21/207 (10%)

Query: 182  QVRTRIKRSRKLADSNFKDLRTLLNETPEQIKYILAQYNTTKDKAFTDLNSINSVLGGGI 241
            Q +  ++  +K  ++  ++L++  ++         A+ N   DK     N + SV G  +
Sbjct: 1252 QAKQEVEHKKKKLEAQVQELQSKCSDGERA----RAELN---DKVHKLQNEVESVTG--M 1302

Query: 242  LDRLRPNIIPVLDEIKSMATAIKETKEALENMNSTLKSLHQQSTQLSSSLTSVKTSLRSS 301
            L+      I +  ++ S+++ +++T+E L+    T + L+  ST+L   L   + SL+  
Sbjct: 1303 LNEAEGKAIKLAKDVASLSSQLQDTQELLQ--EETRQKLN-VSTKL-RQLEEERNSLQDQ 1358

Query: 302  LNDPLCLVHPSSETCNSIRLSLSQLNSNPELRQLPPVDAELDNVNNVLRTDLDGLVQQ-- 359
            L++ +          +++ + LS  +S  +L+        L+      + +++ L QQ  
Sbjct: 1359 LDEEMEAKQNLERHISTLNIQLS--DSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYE 1416

Query: 360  ----GYQSLNDIPDRVQRQTTTVVAGI 382
                 Y  L    +R+Q++   +V  +
Sbjct: 1417 EKAAAYDKLEKTKNRLQQELDDLVVDL 1443


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,846,781
Number of Sequences: 37866
Number of extensions: 1314781
Number of successful extensions: 4042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3977
Number of HSP's gapped (non-prelim): 85
length of query: 865
length of database: 18,247,518
effective HSP length: 111
effective length of query: 754
effective length of database: 14,044,392
effective search space: 10589471568
effective search space used: 10589471568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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