Guide to the Human Genome
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Search of human proteins with 51243063

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens]
         (306 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens]           625   e-179
gi|7661918 MAD2L1 binding protein isoform 2 [Homo sapiens]            534   e-152
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]          52   9e-07
gi|148839316 NIMA-related kinase 4 [Homo sapiens]                      49   6e-06
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]     47   3e-05
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]        47   3e-05
gi|118442834 RPGRIP1-like isoform a [Homo sapiens]                     46   4e-05
gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo sapi...    46   5e-05
gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo sapi...    46   5e-05
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]       45   1e-04
gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo ...    44   1e-04
gi|170932471 hypothetical protein LOC79703 [Homo sapiens]              44   2e-04
gi|6005810 mitogen-activated protein kinase kinase kinase kinase...    43   3e-04
gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo ...    42   5e-04
gi|24497440 interleukin 12 receptor, beta 1 isoform 2 precursor ...    42   5e-04
gi|239755619 PREDICTED: hypothetical protein [Homo sapiens]            42   7e-04
gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo ...    42   7e-04
gi|94680985 cyclin J-like [Homo sapiens]                               42   9e-04
gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo sapiens]     41   0.002
gi|61969666 arginine-fifty homeobox [Homo sapiens]                     40   0.002
gi|226342962 synaptotagmin XIV isoform 2 [Homo sapiens]                39   0.004
gi|226342955 synaptotagmin XIV isoform 1 [Homo sapiens]                39   0.004
gi|58294160 breast carcinoma amplified sequence 4 isoform a [Hom...    39   0.006
gi|237858664 hypothetical protein LOC123207 isoform b [Homo sapi...    38   0.013
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]            38   0.013
gi|122939204 parkin co-regulated gene protein isoform 1 [Homo sa...    37   0.029
gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]      37   0.029
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap...    36   0.049
gi|154146187 TFIIS central domain-containing protein 1 [Homo sap...    35   0.11 
gi|239735607 nucleoredoxin-like 2 isoform 2 [Homo sapiens]             34   0.14 

>gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens]
          Length = 306

 Score =  625 bits (1611), Expect = e-179
 Identities = 306/306 (100%), Positives = 306/306 (100%)

Query: 1   MARVPLGRSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHA 60
           MARVPLGRSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHA
Sbjct: 1   MARVPLGRSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHA 60

Query: 61  SQIELLETSSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLP 120
           SQIELLETSSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLP
Sbjct: 61  SQIELLETSSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLP 120

Query: 121 LPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVP 180
           LPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVP
Sbjct: 121 LPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVP 180

Query: 181 RVLILLGGNALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPL 240
           RVLILLGGNALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPL
Sbjct: 181 RVLILLGGNALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPL 240

Query: 241 MGTVVMAQGHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVT 300
           MGTVVMAQGHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVT
Sbjct: 241 MGTVVMAQGHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVT 300

Query: 301 FKGFRE 306
           FKGFRE
Sbjct: 301 FKGFRE 306


>gi|7661918 MAD2L1 binding protein isoform 2 [Homo sapiens]
          Length = 274

 Score =  534 bits (1376), Expect = e-152
 Identities = 260/263 (98%), Positives = 261/263 (99%)

Query: 44  AEIIDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQ 103
           A + DLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQ
Sbjct: 12  AAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVVFPGPVSQEGCCQ 71

Query: 104 FTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAEL 163
           FTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAEL
Sbjct: 72  FTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQALAEL 131

Query: 164 ESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLF 223
           ESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLF
Sbjct: 132 ESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQSLSTAACLRRLF 191

Query: 224 RAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPS 283
           RAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPS
Sbjct: 192 RAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGHKLTVTLSCGRPS 251

Query: 284 IRTTAWEDYIWFQAPVTFKGFRE 306
           IRTTAWEDYIWFQAPVTFKGFRE
Sbjct: 252 IRTTAWEDYIWFQAPVTFKGFRE 274


>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
          Length = 226

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 27/40 (67%), Positives = 29/40 (72%)

Query: 9  SLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIID 48
          SL LSPRLE NGM SAH N  L GS +SPASASQ   I+D
Sbjct: 58 SLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMD 97


>gi|148839316 NIMA-related kinase 4 [Homo sapiens]
          Length = 841

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 26/42 (61%), Positives = 30/42 (71%)

Query: 5   PLGRSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEI 46
           P  +SL LSP+LE +G   AH N RL GS DSPASAS+VA I
Sbjct: 453 PKDQSLALSPKLECSGTILAHSNLRLLGSSDSPASASRVAGI 494


>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
          Length = 475

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/37 (70%), Positives = 28/37 (75%), Gaps = 3/37 (8%)

Query: 8   RSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVA 44
           RS+T   RLE +GM  AH N RLPGSRDSPASASQ A
Sbjct: 427 RSVT---RLECSGMILAHCNLRLPGSRDSPASASQAA 460


>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
          Length = 638

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 23/42 (54%), Positives = 28/42 (66%)

Query: 15 RLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSE 56
          RLE +G  SAH +  LPGS DSPASASQ+A   D  W E+ +
Sbjct: 8  RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEK 49


>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
          Length = 1315

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 29/65 (44%), Positives = 36/65 (55%)

Query: 8    RSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHASQIELLE 67
            +SL LSP L  +   SAH NFRLPGS D PASASQV  I     + +  E    +I  L 
Sbjct: 1098 QSLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHHTQPSEKIRIEIIALS 1157

Query: 68   TSSTQ 72
             + +Q
Sbjct: 1158 LNDSQ 1162


>gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
           sapiens]
          Length = 312

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 15  RLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHASQIELLETSSTQEP 74
           RLE NG  SAH N  LPGS DSPAS+S+VA I  ++     ++  A  ++L  T    + 
Sbjct: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKC-AQNVQLYGTPKPCQY 107

Query: 75  LNASEAFCPRDC 86
            N   AF    C
Sbjct: 108 CNIIAAFIGNKC 119


>gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo
           sapiens]
          Length = 341

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 15  RLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHASQIELLETSSTQEP 74
           RLE NG  SAH N  LPGS DSPAS+S+VA I  ++     ++  A  ++L  T    + 
Sbjct: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKC-AQNVQLYGTPKPCQY 107

Query: 75  LNASEAFCPRDC 86
            N   AF    C
Sbjct: 108 CNIIAAFIGNKC 119


>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
          Length = 229

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 15  RLEHNGMTSAHHNFRLPGSRDSPASASQVAEI 46
           RL  NG+ SAHHN RL GS DSPASAS+VA I
Sbjct: 193 RLVCNGVISAHHNLRLWGSSDSPASASRVAGI 224


>gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo
          sapiens]
          Length = 261

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 24/35 (68%), Positives = 25/35 (71%)

Query: 10 LTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVA 44
          L L PRLE +G  SA  N RL GS DSPASASQVA
Sbjct: 8  LALYPRLEFSGTISARCNLRLLGSSDSPASASQVA 42


>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
          Length = 677

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 24/40 (60%), Positives = 26/40 (65%)

Query: 9   SLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIID 48
           SLTL PR E +G  SAH N  LPGS DS AS  +VA I D
Sbjct: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITD 147


>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
           isoform 2 [Homo sapiens]
          Length = 833

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 23/37 (62%), Positives = 26/37 (70%)

Query: 13  SPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDL 49
           SPRLE +G  S H N  LPGS +SPASAS+VA I  L
Sbjct: 797 SPRLECSGTISPHCNLLLPGSSNSPASASRVAGITGL 833


>gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo
           sapiens]
          Length = 511

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 9   SLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEI 46
           +L LSPRLE +G  SAH N  L GS +SPA AS+VA I
Sbjct: 137 NLALSPRLECSGKISAHCNPHLQGSSNSPAQASRVAGI 174


>gi|24497440 interleukin 12 receptor, beta 1 isoform 2 precursor
           [Homo sapiens]
          Length = 381

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 21/28 (75%), Positives = 23/28 (82%)

Query: 19  NGMTSAHHNFRLPGSRDSPASASQVAEI 46
           +GM SAH N RLP SRDSPASAS+VA I
Sbjct: 341 DGMISAHCNLRLPDSRDSPASASRVAGI 368


>gi|239755619 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 22/31 (70%), Positives = 23/31 (74%)

Query: 14 PRLEHNGMTSAHHNFRLPGSRDSPASASQVA 44
          PRLE +G  SA  N RL GS DSPASASQVA
Sbjct: 12 PRLEFSGTISARCNLRLLGSSDSPASASQVA 42


>gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo
          sapiens]
          Length = 261

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 22/31 (70%), Positives = 23/31 (74%)

Query: 14 PRLEHNGMTSAHHNFRLPGSRDSPASASQVA 44
          PRLE +G  SA  N RL GS DSPASASQVA
Sbjct: 12 PRLEFSGTISARCNLRLLGSSDSPASASQVA 42


>gi|94680985 cyclin J-like [Homo sapiens]
          Length = 435

 Score = 41.6 bits (96), Expect = 9e-04
 Identities = 20/29 (68%), Positives = 23/29 (79%)

Query: 12  LSPRLEHNGMTSAHHNFRLPGSRDSPASA 40
           LSPRL+ +GM SAH N  LPGS +SPASA
Sbjct: 99  LSPRLKCSGMISAHCNLHLPGSSNSPASA 127


>gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo
          sapiens]
          Length = 183

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/37 (56%), Positives = 26/37 (70%)

Query: 9  SLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAE 45
          SL LSPRLE +G+ SAH N  L  S DS ASAS++ +
Sbjct: 25 SLVLSPRLEPSGVISAHCNLHLLASSDSSASASRLCQ 61


>gi|61969666 arginine-fifty homeobox [Homo sapiens]
          Length = 315

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 5  PLGRSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVA--EIIDLEWYEKSEETHASQ 62
          P   S TL  +LE +G  SA+ +  LPGS D P SAS+VA    I     E++  TH  Q
Sbjct: 31 PASPSFTLLSKLECSGTVSAYCSLNLPGSTDPPTSASRVAATTAIRRRHKERTSFTH-QQ 89

Query: 63 IELLETSSTQ 72
           E LE   +Q
Sbjct: 90 YEELEALFSQ 99


>gi|226342962 synaptotagmin XIV isoform 2 [Homo sapiens]
          Length = 600

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 20/29 (68%), Positives = 22/29 (75%)

Query: 15 RLEHNGMTSAHHNFRLPGSRDSPASASQV 43
          RLE++G   AH NFRL GS DS ASASQV
Sbjct: 33 RLEYSGTILAHCNFRLLGSNDSSASASQV 61


>gi|226342955 synaptotagmin XIV isoform 1 [Homo sapiens]
          Length = 619

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 20/29 (68%), Positives = 22/29 (75%)

Query: 15 RLEHNGMTSAHHNFRLPGSRDSPASASQV 43
          RLE++G   AH NFRL GS DS ASASQV
Sbjct: 33 RLEYSGTILAHCNFRLLGSNDSSASASQV 61


>gi|58294160 breast carcinoma amplified sequence 4 isoform a [Homo
           sapiens]
          Length = 211

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 20/34 (58%), Positives = 24/34 (70%)

Query: 16  LEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDL 49
           +E +G   A  N RLPGS DSPASASQVA I ++
Sbjct: 164 VECSGTIPARCNLRLPGSSDSPASASQVAGITEV 197


>gi|237858664 hypothetical protein LOC123207 isoform b [Homo
           sapiens]
          Length = 167

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 6   LGRSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASAS 41
           L ++L LSP+LE +G+  AH N  L GS  SPASAS
Sbjct: 132 LRQNLALSPKLECSGVVLAHCNLHLLGSSYSPASAS 167


>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
          Length = 400

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 8   RSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLE 50
           + LTL PRLE +G  + + +  LP S D P  ASQ  +IID E
Sbjct: 173 QDLTLLPRLECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSE 215


>gi|122939204 parkin co-regulated gene protein isoform 1 [Homo
           sapiens]
          Length = 296

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 14  PRLEHNGMTSAHHNFRLPGSRDSPASASQVAEII-----DLEWYEKSEETHASQIELLET 68
           PRLE +G   A  N    GS D P SASQVAEII      +++ ++  E     I+  ET
Sbjct: 210 PRLECSGAIMARCNLDHLGSSDPPTSASQVAEIIVNSGDGIDYSQQKRENIGDLIQ--ET 267

Query: 69  SSTQEPLNASEAFCPRDCMVP 89
               E      AF     +VP
Sbjct: 268 LEAFERYGGENAFINIKYVVP 288


>gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]
          Length = 148

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 8   RSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHASQIELLE 67
           +SL +SPRLE  G  SAH    L  S DSP S S+V         E ++    S+ E   
Sbjct: 71  KSLAVSPRLECTGAISAHCKLCLSDSSDSPTSPSRVGGTTGHRCSELAQ--IYSKAERSS 128

Query: 68  TSSTQEPLNASE 79
           T++T  P +  E
Sbjct: 129 TAATSSPNSRKE 140


>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
           sapiens]
          Length = 431

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 8   RSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASAS 41
           + LTLSPRLE  G+  A+ + +L GS D P SAS
Sbjct: 398 QDLTLSPRLECGGVIMAYCSLKLLGSSDPPTSAS 431


>gi|154146187 TFIIS central domain-containing protein 1 [Homo
          sapiens]
          Length = 381

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 21 MTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSE-ETHASQIELLETSSTQEPL 75
          M SAH    LPGS +SPASA +VA    ++  +K++    AS IE L +    E L
Sbjct: 1  MISAHRKLCLPGSSNSPASAFRVAGTTAVKMSDKNQIAARASLIEQLMSKRNFEDL 56


>gi|239735607 nucleoredoxin-like 2 isoform 2 [Homo sapiens]
          Length = 135

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 20/34 (58%), Positives = 22/34 (64%)

Query: 8   RSLTLSPRLEHNGMTSAHHNFRLPGSRDSPASAS 41
           RSL L PRLE +G+  AH N  L GS DS A AS
Sbjct: 102 RSLALLPRLECSGVILAHCNLCLLGSSDSLALAS 135


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,416,747
Number of Sequences: 37866
Number of extensions: 565705
Number of successful extensions: 1616
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1558
Number of HSP's gapped (non-prelim): 82
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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