TWISTNB 31779

Name: TWISTNB	Sequence: fasta or formatted (338aa)		NCBI GI: 50962817
Description: TWIST neighbor		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 27 3 C cysteine 2.7 9 1 D aspartate 5.9 20 2 E glutamate 9.2 31 3 F phenylalanine 3.0 10 1 G glycine 6.8 23 1 H histidine 2.7 9 1 I isoleucine 4.4 15 1 K lysine 10.7 36 8 L leucine 7.7 26 2 M methionine 1.5 5 1 N asparagine 4.1 14 2 P proline 5.6 19 2 Q glutamine 4.4 15 1 R arginine 3.8 13 1 S serine 7.7 26 3 T threonine 3.6 12 2 V valine 5.3 18 2 W tryptophan 0.6 2 1 Y tyrosine 2.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TWIST neighbor LOC100294088 0.036 PREDICTED: hypothetical protein, partial NOP56 0.033 nucleolar protein 5A PPIG 0.030 peptidylprolyl isomerase G NKAP 0.030 NFKB activating protein FAM133A 0.030 hypothetical protein LOC286499 CHD2 0.029 chromodomain helicase DNA binding protein 2 isoform... MAP1B 0.029 microtubule-associated protein 1B SDCCAG1 0.027 serologically defined colon cancer antigen 1 GTF2F1 0.027 general transcription factor IIF, polypeptide 1, 74... THOC2 0.024 THO complex 2 NKAPL 0.024 NFKB activating protein-like NOP58 0.024 NOP58 ribonucleoprotein homolog EIF5B 0.024 eukaryotic translation initiation factor 5B GPATCH4 0.024 G patch domain containing 4 isoform 2 GPATCH4 0.024 G patch domain containing 4 isoform 1 TTF1 0.023 transcription termination factor, RNA polymerase I [... WDR87 0.023 NYD-SP11 protein CYLC1 0.023 cylicin, basic protein of sperm head cytoskeleton 1... AP3B2 0.021 adaptor-related protein complex 3, beta 2 subunit [H... AKAP12 0.021 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.021 A kinase (PRKA) anchor protein 12 isoform 2 ATRX 0.021 transcriptional regulator ATRX isoform 2 ATRX 0.021 transcriptional regulator ATRX isoform 1 TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform a ... FAM133B 0.021 hypothetical protein LOC257415 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.