Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFYVE27 Sequence: fasta or formatted (411aa) NCBI GI: 50557644
Description:

zinc finger, FYVE domain containing 27 isoform b

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [416aa] zinc finger, FYVE domain containing 27 isoform a
alt prot [404aa] zinc finger, FYVE domain containing 27 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         27           2
 C cysteine            4.4         18           2
 D aspartate           3.6         15           2
 E glutamate           9.5         39           2
 F phenylalanine       4.4         18           2
 G glycine             5.4         22           2
 H histidine           1.0          4           1
 I isoleucine          1.0          4           1
 K lysine              3.9         16           2
 L leucine            13.6         56           2
 M methionine          2.2          9           1
 N asparagine          3.6         15           2
 P proline             7.1         29           4
 Q glutamine           3.2         13           2
 R arginine            6.3         26           2
 S serine              9.0         37           2
 T threonine           4.9         20           1
 V valine              6.8         28           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 27 isoform b [Ho... 
ZFYVE27               0.991   zinc finger, FYVE domain containing 27 isoform a [Ho...
ZFYVE27               0.974   zinc finger, FYVE domain containing 27 isoform c [Ho...
MTMR3                 0.041   myotubularin-related protein 3 isoform b 
ZFYVE28               0.033   zinc finger, FYVE domain containing 28 
MTMR3                 0.033   myotubularin-related protein 3 isoform c 
MTMR4                 0.033   myotubularin related protein 4 
ZFYVE19               0.031   zinc finger, FYVE domain containing 19 
MTMR3                 0.031   myotubularin-related protein 3 isoform a 
ZFYVE21               0.030   zinc finger, FYVE domain containing 21 
PIKFYVE               0.030   phosphatidylinositol-3-phosphate 5-kinase type III ...
WDFY3                 0.028   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.028   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
ZFYVE9                0.027   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.027   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.027   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
RUFY1                 0.025   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.025   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.025   RUN and FYVE domain-containing 1 isoform a 
EEA1                  0.025   early endosome antigen 1, 162kD 
ZFYVE16               0.025   zinc finger, FYVE domain containing 16 
ZFYVE16               0.025   zinc finger, FYVE domain containing 16 
RUFY2                 0.020   RUN and FYVE domain-containing 2 isoform a 
ANKFY1                0.018   ankyrin repeat and FYVE domain containing 1 isoform...
ZFYVE1                0.016   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.016   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
FGD3                  0.015   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.015   FYVE, RhoGEF and PH domain containing 3 
HGS                   0.014   hepatocyte growth factor-regulated tyrosine kinase su...
FAM134B               0.014   hypothetical protein LOC54463 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press