Search of human proteins with 5032181

Search of human proteins with 5032181

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5032181 translocase of inner mitochondrial membrane 17
homolog B [Homo sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5032181 translocase of inner mitochondrial membrane 17 homolo...   356   5e-99
gi|5454120 translocase of inner mitochondrial membrane 17 homolo...   276   6e-75
gi|56606061 translocase of inner mitochondrial membrane 22 homol...    42   2e-04
gi|59710109 hypothetical protein LOC51300 [Homo sapiens]               33   0.12 
gi|34486092 adenylate cyclase 5 [Homo sapiens]                         33   0.16 
gi|32967311 ephrin receptor EphA2 [Homo sapiens]                       30   1.0  
gi|21361825 G protein-coupled receptor 137 [Homo sapiens]              29   2.3  
gi|5454122 translocase of inner mitochondrial membrane 23 (yeast...    28   3.0  
gi|239744085 PREDICTED: hypothetical protein XP_002343028 isofor...    28   3.0  
gi|239744083 PREDICTED: hypothetical protein XP_002343027 isofor...    28   3.0  
gi|4507753 tyrosinase precursor [Homo sapiens]                         28   3.9  
gi|239751058 PREDICTED: hypothetical protein XP_002347690 [Homo ...    28   3.9  
gi|34452173 integrin alpha X precursor [Homo sapiens]                  28   3.9  
gi|54860079 nadrin isoform 1 [Homo sapiens]                            28   3.9  
gi|54860105 nadrin isoform 2 [Homo sapiens]                            28   3.9  
gi|4507157 sortilin-related receptor containing LDLR class A rep...    28   5.1  
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ...    28   5.1  
gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo sap...    27   6.7  
gi|7705753 complement component 1, q subcomponent, A chain precu...    27   8.7  

>gi|5032181 translocase of inner mitochondrial membrane 17 homolog B
           [Homo sapiens]
          Length = 172

 Score =  356 bits (914), Expect = 5e-99
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60
           MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP
Sbjct: 1   MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60

Query: 61  QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGG 120
           QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGG
Sbjct: 61  QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGG 120

Query: 121 ILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQQYH 172
           ILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQQYH
Sbjct: 121 ILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQQYH 172


>gi|5454120 translocase of inner mitochondrial membrane 17 homolog A
           [Homo sapiens]
          Length = 171

 Score =  276 bits (706), Expect = 6e-75
 Identities = 130/171 (76%), Positives = 147/171 (85%), Gaps = 1/171 (0%)

Query: 1   MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60
           MEEYAREPCPWRIVDDCGGAFTMG IGGG+FQAIKGFRN+PVG+ HRLRGS  A++ RAP
Sbjct: 1   MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60

Query: 61  QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGG 120
           Q+GGSFAVWGGLFS IDC +V++RGKEDPWNSITSGALTGA+LAAR+GP+AMVGSA MGG
Sbjct: 61  QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGG 120

Query: 121 ILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQQY 171
           ILLALIEG GILLTR+ + QF N P F EDPSQLP     P+  +  Y+QY
Sbjct: 121 ILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQ-LPSSPFGDYRQY 170


>gi|56606061 translocase of inner mitochondrial membrane 22 homolog
           [Homo sapiens]
          Length = 194

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 11/115 (9%)

Query: 1   MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIR----HRLRGSANAVR 56
           M E A E C ++    C G F +G    G F       +  VG      +R   +   ++
Sbjct: 61  MIEKAMESCAFKAALACVGGFVLG----GAFGVFTAGIDTNVGFDPKDPYRTPTAKEVLK 116

Query: 57  I---RAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSG 108
               R      +FA+ G +FS  +C +   RG  D  NS+ SG +TG  +  R+G
Sbjct: 117 DMGQRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAG 171


>gi|59710109 hypothetical protein LOC51300 [Homo sapiens]
          Length = 285

 Score = 33.1 bits (74), Expect = 0.12
 Identities = 18/77 (23%), Positives = 40/77 (51%)

Query: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122
           G   AV+  +F+T++  L   R K+   + + +GA+TG++     G   +V   ++G +L
Sbjct: 139 GWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGLRGLVAGGIIGALL 198

Query: 123 LALIEGVGILLTRYTAQ 139
              + G+ +   +Y+ +
Sbjct: 199 GTPVGGLLMAFQKYSGE 215


>gi|34486092 adenylate cyclase 5 [Homo sapiens]
          Length = 1261

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 43  GIRHRLRGSANAVRIRAPQIGG------SFAVWGGLF---STIDCGLVRLRGKEDPWNSI 93
           G R + RG+A+    RAP  GG      + A  GG      +++ GL   RGK    + +
Sbjct: 114 GSRRQRRGAASGGSTRAPPAGGGGGSAAAAASAGGTEVRPRSVEVGLEERRGKGRAADEL 173

Query: 94  TSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQF 141
            +GA+ G   +   G  A  GS    G +L+L      LL  + +++F
Sbjct: 174 EAGAVEGGEGSGDGGSSADSGSGAGPGAVLSLGACCLALLQIFRSKKF 221


>gi|32967311 ephrin receptor EphA2 [Homo sapiens]
          Length = 976

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 107 SGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPP---FLEDPSQLPP 156
           SG LA++G   +G +LL ++ GVG  + R    Q     P   +     QL P
Sbjct: 532 SGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRKNQRARQSPEDVYFSKSEQLKP 584


>gi|21361825 G protein-coupled receptor 137 [Homo sapiens]
          Length = 417

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 2/99 (2%)

Query: 68  VWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIE 127
           VW  L +T+  G  R+     P +  TS  L G V A+RS      G     G       
Sbjct: 282 VWELLPTTLLVGFFRVH--RPPQDLSTSHILNGQVFASRSYFFDRAGHCEDEGCSWEHSR 339

Query: 128 GVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYP 166
           G         A    + PP   DP   P +   P+P +P
Sbjct: 340 GESTRCQDQAATTTVSTPPHRRDPPPSPTEYPGPSPPHP 378


>gi|5454122 translocase of inner mitochondrial membrane 23 (yeast)
           homolog [Homo sapiens]
          Length = 209

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 64  GSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILL 123
           GS A+   L+S     + + RG ED  N++ +G +TG +     G   +    + G  L 
Sbjct: 132 GSLAL---LYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGGLTGLTLT 188

Query: 124 AL 125
           +L
Sbjct: 189 SL 190


>gi|239744085 PREDICTED: hypothetical protein XP_002343028 isoform 2
           [Homo sapiens]
          Length = 172

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 64  GSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILL 123
           GS A+   L+S     + + RG ED  N++ +G +TG +     G   +    + G  L 
Sbjct: 95  GSLAL---LYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGGLTGLTLT 151

Query: 124 AL 125
           +L
Sbjct: 152 SL 153


>gi|239744083 PREDICTED: hypothetical protein XP_002343027 isoform 1
           [Homo sapiens]
          Length = 209

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 64  GSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILL 123
           GS A+   L+S     + + RG ED  N++ +G +TG +     G   +    + G  L 
Sbjct: 132 GSLAL---LYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGGLTGLTLT 188

Query: 124 AL 125
           +L
Sbjct: 189 SL 190


>gi|4507753 tyrosinase precursor [Homo sapiens]
          Length = 529

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 112 MVGSAMMGGILLALIEGVGILLTRYTAQQ 140
           ++G+AM+G +L AL+ G+  LL R+  +Q
Sbjct: 478 LLGAAMVGAVLTALLAGLVSLLCRHKRKQ 506


>gi|239751058 PREDICTED: hypothetical protein XP_002347690 [Homo
           sapiens]
          Length = 462

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 112 MVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPS 167
           +VGS++ G +LLALI  V +    +  +Q++      E   Q+ P++GT  P  PS
Sbjct: 408 IVGSSIGGLLLLALITAV-LYKVGFFKRQYKEM--MEEANGQIAPENGTQTPSPPS 460


>gi|34452173 integrin alpha X precursor [Homo sapiens]
          Length = 1163

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 112  MVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPS 167
            +VGS++ G +LLALI  V +    +  +Q++      E   Q+ P++GT  P  PS
Sbjct: 1109 IVGSSIGGLLLLALITAV-LYKVGFFKRQYKEM--MEEANGQIAPENGTQTPSPPS 1161


>gi|54860079 nadrin isoform 1 [Homo sapiens]
          Length = 881

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 148 LEDPSQLPPKDGTPAPGYPSYQ 169
           ++ P+  PPK G P PG+P  Q
Sbjct: 633 VKKPAPAPPKPGNPPPGHPGGQ 654


>gi|54860105 nadrin isoform 2 [Homo sapiens]
          Length = 803

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 148 LEDPSQLPPKDGTPAPGYPSYQ 169
           ++ P+  PPK G P PG+P  Q
Sbjct: 555 VKKPAPAPPKPGNPPPGHPGGQ 576


>gi|4507157 sortilin-related receptor containing LDLR class A repeats
            preproprotein [Homo sapiens]
          Length = 2214

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query: 90   WNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQ 140
            ++ + SGA   A  AARS  +A V   ++  ILL+L  G  IL T++   Q
Sbjct: 2116 YDELGSGADASATQAARSTDVAAVVVPILFLILLSLGVGFAILYTKHRRLQ 2166


>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
           [Homo sapiens]
          Length = 1585

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 RYTAQQFRNA-PPFLEDPSQLPPKDGTPAPGYP 166
           +Y   Q+R++ PP++  P Q P +   P P YP
Sbjct: 65  QYCIPQYRHSGPPYVGPPQQYPVQPPGPGPFYP 97


>gi|4506137 proline rich Gla (G-carboxyglutamic acid) 2 [Homo
           sapiens]
          Length = 202

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 19/77 (24%)

Query: 110 LAMVGSAMMGGILLALIEGVGIL-LTRYTAQQFRNAPPF---------------LEDPSQ 153
           +A +   + GGILL ++ G+G     R+  +Q R   P                L  P+ 
Sbjct: 107 VASLAVGLTGGILLIVLAGLGAFWYLRW--RQHRGQQPCPQEAGLISPLSPLNPLGPPTP 164

Query: 154 LPPKDGTPAPGYPSYQQ 170
           LPP    P PG P+Y+Q
Sbjct: 165 LPPPP-PPPPGLPTYEQ 180


>gi|7705753 complement component 1, q subcomponent, A chain
           precursor [Homo sapiens]
          Length = 245

 Score = 26.9 bits (58), Expect = 8.7
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 24  GVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQIGGSFAVW 69
           G +G      IKG + +P  I+ + R + +A+R R P +GG+  ++
Sbjct: 89  GPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIR-RNPPMGGNVVIF 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.141    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,408,949
Number of Sequences: 37866
Number of extensions: 330782
Number of successful extensions: 1105
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1088
Number of HSP's gapped (non-prelim): 21
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.