Guide to the Human Genome
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Name: TIMM17A Sequence: fasta or formatted (171aa) NCBI GI: 5454120
Description:

translocase of inner mitochondrial membrane 17 homolog A

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         18           2
 C cysteine            1.8          3           1
 D aspartate           3.5          6           2
 E glutamate           3.5          6           2
 F phenylalanine       5.3          9           1
 G glycine            14.0         24           3
 H histidine           0.6          1           1
 I isoleucine          6.4         11           1
 K lysine              1.8          3           1
 L leucine             7.6         13           2
 M methionine          3.5          6           1
 N asparagine          2.9          5           1
 P proline             7.0         12           1
 Q glutamine           5.3          9           1
 R arginine            5.8         10           1
 S serine              7.6         13           2
 T threonine           4.7          8           1
 V valine              4.7          8           1
 W tryptophan          1.8          3           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of inner mitochondrial membrane 17 homolo... 
TIMM17B               0.772   translocase of inner mitochondrial membrane 17 homolo...
TIMM22                0.062   translocase of inner mitochondrial membrane 22 homol...
ADCY5                 0.028   adenylate cyclase 5 
ENPEP                 0.015   glutamyl aminopeptidase 
SMARCE1               0.009   SWI/SNF-related matrix-associated actin-dependent re...
C3orf1                0.009   hypothetical protein LOC51300 
SMG7                  0.009   SMG-7 homolog isoform 1 
SMG7                  0.009   SMG-7 homolog isoform 4 
SMG7                  0.009   SMG-7 homolog isoform 2 
SSBP4                 0.009   single stranded DNA binding protein 4 isoform b [Hom...
EPHA2                 0.006   ephrin receptor EphA2 
C1QA                  0.006   complement component 1, q subcomponent, A chain precu...
TIMM23                0.006   translocase of inner mitochondrial membrane 23 (yeast...
LOC100287932          0.006   PREDICTED: hypothetical protein XP_002343028 isofor...
LOC100287932          0.006   PREDICTED: hypothetical protein XP_002343027 isofor...
SLC25A41              0.006   solute carrier family 25, member 41 
FAM186A               0.006   family with sequence similarity 186, member A [Homo...
SORL1                 0.006   sortilin-related receptor containing LDLR class A rep...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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