Guide to the Human Genome
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Name: TIMM22 Sequence: fasta or formatted (194aa) NCBI GI: 56606061
Description:

translocase of inner mitochondrial membrane 22 homolog

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.9         29           4
 C cysteine            3.1          6           1
 D aspartate           3.6          7           1
 E glutamate           5.2         10           2
 F phenylalanine       5.2         10           1
 G glycine            13.9         27           2
 H histidine           0.0          0           0
 I isoleucine          5.2         10           1
 K lysine              5.7         11           1
 L leucine             7.2         14           3
 M methionine          3.1          6           1
 N asparagine          2.1          4           1
 P proline             5.2         10           1
 Q glutamine           2.6          5           1
 R arginine            3.6          7           1
 S serine              7.2         14           1
 T threonine           4.1          8           1
 V valine              4.1          8           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.6          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of inner mitochondrial membrane 22 homol... 
TIMM17A               0.054   translocase of inner mitochondrial membrane 17 homolo...
TIMM17B               0.046   translocase of inner mitochondrial membrane 17 homolo...
TIMM23                0.035   translocase of inner mitochondrial membrane 23 (yeast...
LOC100287932          0.035   PREDICTED: hypothetical protein XP_002343027 isofor...
DIDO1                 0.019   death inducer-obliterator 1 isoform c 
ARID1A                0.016   AT rich interactive domain 1A isoform a 
ARID1A                0.016   AT rich interactive domain 1A isoform b 
USP42                 0.016   ubiquitin specific peptidase 42 
LOC100287932          0.011   PREDICTED: hypothetical protein XP_002343028 isofor...
RLTPR                 0.011   RGD motif, leucine rich repeats, tropomodulin domain...
LOR                   0.011   loricrin 
TLX1                  0.011   T-cell leukemia homeobox 1 
PTAR1                 0.008   protein prenyltransferase alpha subunit repeat cont...
PIK3R4                0.008   phosphoinositide-3-kinase, regulatory subunit 4 [Hom...
NDUFA11               0.008   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, ...
DCTN1                 0.005   dynactin 1 isoform 4 
DCTN1                 0.005   dynactin 1 isoform 3 
DCTN1                 0.005   dynactin 1 isoform 2 
DCTN1                 0.005   dynactin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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