Search of human proteins with 5032031

Search of human proteins with 5032031

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5032031 RNA binding motif protein 5 [Homo sapiens]
         (815 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5032031 RNA binding motif protein 5 [Homo sapiens]                1643   0.0  
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]     841   0.0  
gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]     803   0.0  
gi|5032033 RNA binding motif protein 6 [Homo sapiens]                 224   2e-58
gi|39725952 angiogenic factor VG5Q [Homo sapiens]                      66   1e-10
gi|8922313 G patch domain containing 2 [Homo sapiens]                  61   4e-09
gi|55956788 nucleolin [Homo sapiens]                                   54   8e-07
gi|148746195 trichohyalin [Homo sapiens]                               53   1e-06
gi|9558733 transformer-2 alpha [Homo sapiens]                          52   2e-06
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi...    50   1e-05
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi...    50   1e-05
gi|50962882 G patch domain containing 8 [Homo sapiens]                 49   1e-05
gi|56788356 tuftelin interacting protein 11 [Homo sapiens]             49   2e-05
gi|8393259 tuftelin interacting protein 11 [Homo sapiens]              49   2e-05
gi|33469964 splicing factor 4 [Homo sapiens]                           49   2e-05
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]     48   4e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             47   7e-05
gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...    47   9e-05
gi|148747556 PIN2-interacting protein 1 [Homo sapiens]                 46   1e-04
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik...    45   2e-04
gi|63003897 transcription factor NRF [Homo sapiens]                    45   3e-04
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa...    44   5e-04
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    44   6e-04
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ...    44   8e-04
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       44   8e-04
gi|116734696 RNA binding motif protein 23 isoform 1 [Homo sapiens]     43   0.001
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s...    43   0.001
gi|47933339 RNA binding motif protein 15 [Homo sapiens]                43   0.001
gi|56090527 RNA binding motif protein, Y-linked, family 1, membe...    43   0.001
gi|54633344 RNA binding motif protein, Y-linked, family 1, membe...    43   0.001

>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
          Length = 815

 Score = 1643 bits (4254), Expect = 0.0
 Identities = 815/815 (100%), Positives = 815/815 (100%)

Query: 1   MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP 60
           MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP
Sbjct: 1   MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP 60

Query: 61  ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMES 120
           ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMES
Sbjct: 61  ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMES 120

Query: 121 FEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPRP 180
           FEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPRP
Sbjct: 121 FEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPRP 180

Query: 181 KFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAP 240
           KFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAP
Sbjct: 181 KFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAP 240

Query: 241 HTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPP 300
           HTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPP
Sbjct: 241 HTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPP 300

Query: 301 LKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSY 360
           LKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSY
Sbjct: 301 LKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSY 360

Query: 361 LQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQTS 420
           LQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQTS
Sbjct: 361 LQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQTS 420

Query: 421 NPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLYY 480
           NPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLYY
Sbjct: 421 NPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLYY 480

Query: 481 DPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQI 540
           DPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQI
Sbjct: 481 DPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQI 540

Query: 541 AKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIP 600
           AKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIP
Sbjct: 541 AKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIP 600

Query: 601 ELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKD 660
           ELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKD
Sbjct: 601 ELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKD 660

Query: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEP 720
           ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEP
Sbjct: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEP 720

Query: 721 KRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLK 780
           KRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLK
Sbjct: 721 KRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLK 780

Query: 781 GAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 815
           GAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME
Sbjct: 781 GAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 815


>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
          Length = 930

 Score =  841 bits (2173), Expect = 0.0
 Identities = 477/945 (50%), Positives = 608/945 (64%), Gaps = 145/945 (15%)

Query: 1   MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRR---RDSDYK---RSSDDRRGDR-YDD 53
           M  ++R  R +R+GRYG+  DR   D  E+RSR    RD DY+   R    + G   YDD
Sbjct: 1   MEYERRGGRGDRTGRYGAT-DRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDD 59

Query: 54  YRDYDSPE--------------RERERRNSDRSEDGYHSDGDYGEHDYRHDISDERE--- 96
             +  S E              R R  R+S     G+  DGDY + DYR +  +E E   
Sbjct: 60  SSEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEEEEEE 119

Query: 97  --------SKTIMLRGLPITITESDIREMMESFEGPQPADVRLMKRKT-GVSRGFAFVEF 147
                   S  +MLR LP   TE DIR  ++S  G Q  +VRLM+ K+ G SRGFAFVEF
Sbjct: 120 DEEEEEKASNIVMLRMLPQAATEDDIRGQLQS-HGVQAREVRLMRNKSSGQSRGFAFVEF 178

Query: 148 YHLQDATSWMEANQKKLVIQGKHIAMHYSNPRPKF-EDWLCNKCCLNNFRKRLKCFRCGA 206
            HLQDAT WMEANQ  L I G+ ++MHYS+P+PK  EDWLCNKC + NF++R KCF+CG 
Sbjct: 179 SHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGV 238

Query: 207 DKFDSEQEVPPGTTESVQSV-------------------------------------DYY 229
            K ++EQ++P GT    Q++                                     +  
Sbjct: 239 PKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENA 298

Query: 230 CDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQ 289
            DTIILRN+ PH+ +DSI+ AL+PYA L+ +N+R+IKDKQTQ NRGFAF+QLS+ ++A+Q
Sbjct: 299 NDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVEAAQ 358

Query: 290 LLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQ-S 348
           LLQILQ+LHPPL IDGKTI V+FAK +++D+  ++G+R+SA SVASTAIAAAQW+ +Q S
Sbjct: 359 LLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQAS 418

Query: 349 QSGEG-------GSVDYSYLQPGQDGY-----AQYAQYSQDY------------------ 378
           Q GEG         VDYSY Q   +GY      + + Y+  Y                  
Sbjct: 419 QGGEGTWATSEEPPVDYSYYQQ-DEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTG 477

Query: 379 ----------------QQFYQQQAGGL------ESDASSASGTAVTTTSAAVVSQSPQLY 416
                           Q F + Q G         ++ASS+ GTA  + S  ++S      
Sbjct: 478 AGPEASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMS------ 531

Query: 417 NQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTT 476
                P    +E   P+  +S   PA SPT     ++Y VPD STYQYDE+SGYYYDP T
Sbjct: 532 -----PAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQT 586

Query: 477 GLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSS--HQQSGLPPAKEGKEKKEKPKS 534
           GLYYDPNSQYYYN+ +QQYLYWDGE+ TYVPA E S+  H+++G  P+KEGKEKKEK K+
Sbjct: 587 GLYYDPNSQYYYNAQSQQYLYWDGERRTYVPALEQSADGHKETG-APSKEGKEKKEKHKT 645

Query: 535 KTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAE 594
           KTAQQIAKDMERWA+SLNKQKENFKNSFQP++SLR++ERRESA ADAG+A+ EKKGALAE
Sbjct: 646 KTAQQIAKDMERWARSLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAE 705

Query: 595 RQQLIPELVRNGDEENPL-KRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCR 653
           RQ    +L +   ++ P   RGLVAAYSG+SD+EEE        EEKL DW+K+ACLLCR
Sbjct: 706 RQHTSMDLPKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCR 765

Query: 654 RQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELRERE-MKYRDRAAERREKY 712
           RQFP+K+AL+RHQQLS LHKQN++I+RR+ LSE ELEALE  + E MKYRDRAAERREKY
Sbjct: 766 RQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKY 825

Query: 713 GIPEPPEPKRKKQ--FDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGIT 770
           GIPEPPEPKR+K       +V++EQPT+DG+   NIG++MLQAMGW+EGSGLGRK QGI 
Sbjct: 826 GIPEPPEPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIV 885

Query: 771 APIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME 815
            PIEAQ R++G+GLGA+GS+YG++  +SYK+ + K M  RF E +
Sbjct: 886 TPIEAQTRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 930


>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
          Length = 852

 Score =  803 bits (2075), Expect = 0.0
 Identities = 456/913 (49%), Positives = 585/913 (64%), Gaps = 159/913 (17%)

Query: 1   MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP 60
           M  ++R  R +R+GRYG+  DR   D  E+RSR  D DY+            DYR Y   
Sbjct: 1   MEYERRGGRGDRTGRYGAT-DRSQDDGGENRSR--DHDYRDM----------DYRSYPR- 46

Query: 61  ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMES 120
                               +YG  + +HD  D  E ++  +RG             ++S
Sbjct: 47  --------------------EYGSQEGKHDYDDSSEEQSAEIRG------------QLQS 74

Query: 121 FEGPQPADVRLMKRKT-GVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPR 179
             G Q  +VRLM+ K+ G SRGFAFVEF HLQDAT WMEANQ  L I G+ ++MHYS+P+
Sbjct: 75  -HGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPK 133

Query: 180 PKF-EDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSV------------ 226
           PK  EDWLCNKC + NF++R KCF+CG  K ++EQ++P GT    Q++            
Sbjct: 134 PKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLL 193

Query: 227 -------------------------DYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNN 261
                                    +   DTIILRN+ PH+ +DSI+ AL+PYA L+ +N
Sbjct: 194 PLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHSTMDSILGALAPYAVLSSSN 253

Query: 262 IRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLV 321
           +R+IKDKQTQ NRGFAF+QLS+ ++A+QLLQILQ+LHPPL IDGKTI V+FAK +++D+ 
Sbjct: 254 VRVIKDKQTQLNRGFAFIQLST-IEAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMA 312

Query: 322 LSDGNRVSAFSVASTAIAAAQWSSTQ-SQSGEG-------GSVDYSYLQPGQDGY----- 368
            ++G+R+SA SVASTAIAAAQW+ +Q SQ GEG         VDYSY Q   +GY     
Sbjct: 313 SNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQQ-DEGYGNSQG 371

Query: 369 AQYAQYSQDY----------------------------------QQFYQQQAGGL----- 389
            + + Y+  Y                                  Q F + Q G       
Sbjct: 372 TESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSRAQPGAAPGIYQ 431

Query: 390 -ESDASSASGTAVTTTSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGV 448
             ++ASS+ GTA  + S  ++S           P    +E   P+  +S   PA SPT  
Sbjct: 432 QSAEASSSQGTAANSQSYTIMS-----------PAVLKSELQSPTHPSSALPPATSPTAQ 480

Query: 449 VPGTKYAVPDTSTYQYDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPA 508
              ++Y VPD STYQYDE+SGYYYDP TGLYYDPNSQYYYN+ +QQYLYWDGE+ TYVPA
Sbjct: 481 ESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPA 540

Query: 509 AESSS--HQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVN 566
            E S+  H+++G  P+KEGKEKKEK K+KTAQQIAKDMERWA+SLNKQKENFKNSFQP++
Sbjct: 541 LEQSADGHKETG-APSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPIS 599

Query: 567 SLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPL-KRGLVAAYSGDSD 625
           SLR++ERRESA ADAG+A+ EKKGALAERQ    +L +   ++ P   RGLVAAYSG+SD
Sbjct: 600 SLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESD 659

Query: 626 NEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLS 685
           +EEE        EEKL DW+K+ACLLCRRQFP+K+AL+RHQQLS LHKQN++I+RR+ LS
Sbjct: 660 SEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLS 719

Query: 686 EQELEALELRERE-MKYRDRAAERREKYGIPEPPEPKRKKQ--FDAGTVNYEQPTKDGID 742
           E ELEALE  + E MKYRDRAAERREKYGIPEPPEPKR+K       +V++EQPT+DG+ 
Sbjct: 720 ENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLG 779

Query: 743 HSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDA 802
             NIG++MLQAMGW+EGSGLGRK QGI  PIEAQ R++G+GLGA+GS+YG++  +SYK+ 
Sbjct: 780 SDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKET 839

Query: 803 VRKAMFARFTEME 815
           + K M  RF E +
Sbjct: 840 LHKTMVTRFNEAQ 852


>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
          Length = 1123

 Score =  224 bits (571), Expect = 2e-58
 Identities = 145/374 (38%), Positives = 201/374 (53%), Gaps = 60/374 (16%)

Query: 462  YQYDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPP 521
            Y YD ++GYYYDP  G YYDPN+Q                +E YVP       Q  GLP 
Sbjct: 790  YIYDSATGYYYDPLAGTYYDPNTQ----------------QEVYVP-------QDPGLPE 826

Query: 522  AKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADA 581
             +E KEKK   + K++ +  K+M   +K   K+K++     + V   +E      A A+ 
Sbjct: 827  EEEIKEKKPTSQGKSSSK--KEM---SKRDGKEKKD-----RGVTRFQENASEGKAPAED 876

Query: 582  GFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVE--------- 632
             F          E     P++V      NPL  GL+  Y GDSD EEE  E         
Sbjct: 877  VFKKPLPPTVKKEESPPPPKVV------NPL-IGLLGEYGGDSDYEEEEEEEQTPPPQPR 929

Query: 633  -----------RLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRR 681
                       + E+EE+KL DW K+ACLLCRRQFPNK+ L++HQQLSDLHKQN++I+R+
Sbjct: 930  TAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRK 989

Query: 682  SRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGI 741
             + SEQEL  LE RERE K++ R  +RREK    + PE KR K       + +   K+ I
Sbjct: 990  IKQSEQELAYLERREREGKFKGRGNDRREKLQSFDSPERKRIKYSRETDSDRKLVDKEDI 1049

Query: 742  DHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKD 801
            D S+ G  + QA GWR+G+GLG    G+ +  EA+ R++G  +GA G        ++Y+D
Sbjct: 1050 DTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNETYRD 1109

Query: 802  AVRKAMFARFTEME 815
            AVR+ MFAR+ E++
Sbjct: 1110 AVRRVMFARYKELD 1123



 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 17/176 (9%)

Query: 34  RRDSDYK----RSSDDRR-GDRYDDYRDYDSPERERERRNSDRSEDGYHSDGDYGEHDYR 88
           R+D+DY+    R  D R  G +   Y    S    +  R++ R         D  + DYR
Sbjct: 396 RQDTDYRSMEYRDVDHRLPGSQMFGYGQSKSFPEGKTARDAQR---------DLQDQDYR 446

Query: 89  HDISDERESKTIMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFY 148
              S+E+ S+ I L G+P   T+ +I     + +G    +++L +  TG   G+  VEF 
Sbjct: 447 TGPSEEKPSRLIRLSGVPEDATKEEILNAFRTPDGMPVKNLQLKEYNTGYDYGYVCVEFS 506

Query: 149 HLQDATSWMEANQKKLVIQGKHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRC 204
            L+DA   MEANQ  L+IQ K + + Y +     + W C +C  N    R  C  C
Sbjct: 507 LLEDAIGCMEANQGTLMIQDKEVTLEYVS---SLDFWYCKRCKANIGGHRSSCSFC 559



 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 11/165 (6%)

Query: 210 DSEQEVPPGTTESVQSVDYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQ 269
           D E+E   G T      D    TI+L+ I   T  + I+  L PY  L   N+R+IK++ 
Sbjct: 639 DRERESWSGETRQ----DGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRT 694

Query: 270 TQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLSDGNRV- 328
                 + F+ L S  +A ++++ILQ+L PP  IDGK + V+ A   R++      + + 
Sbjct: 695 GPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMH 754

Query: 329 -----SAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQPGQDGY 368
                  F         + WSS  ++ G+  S D  Y+     GY
Sbjct: 755 YYQGKKYFRDRRGGGRNSDWSSDTNRQGQQSSSD-CYIYDSATGY 798



 Score = 36.6 bits (83), Expect = 0.096
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 28/156 (17%)

Query: 27  ERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP----ERERERRNSDRSEDGYHSDGDY 82
           E E R R    + +     R  +RY      + P    +RERE  + +  +DG       
Sbjct: 601 EPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQDG------- 653

Query: 83  GEHDYRHDISDERESKTIMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTG-VSRG 141
                        ESKTIML+ +  +     I E++E +     A+VR++K +TG +   
Sbjct: 654 -------------ESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHT 700

Query: 142 FAFVEFYHLQDATSWMEANQK---KLVIQGKHIAMH 174
           + F++     +A   ++  Q       I GK +A++
Sbjct: 701 YGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVN 736


>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
          Length = 714

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 25/230 (10%)

Query: 416 YNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPT 475
           Y Q  +   +  E A    +  T    +S    +     A    + + YDE++G Y+D +
Sbjct: 161 YRQVDHFASNSQEPASALATEDTSLEGSSLAESLRAAAEAAVSQTGFSYDENTGLYFDHS 220

Query: 476 TGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPP-----AKEGKEKKE 530
           TG YYD  +Q YY+  T  Y Y D E   Y        H +  L P      K+ K+KK 
Sbjct: 221 TGFYYDSENQLYYDPSTGIYYYCDVESGRY------QFHSRVDLQPYPTSSTKQSKDKKL 274

Query: 531 KPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKG 590
           K K K     A + E   K LN   E+ K       S  EEE          FA  +KK 
Sbjct: 275 KKKRKDPDSSATNEE---KDLN--SEDQKAFSVEHTSCNEEE---------NFANMKKKA 320

Query: 591 ALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEK 640
            +    +  P  V      N ++  L    S  +  ++E +   +SE E+
Sbjct: 321 KIGIHHKNSPPKVTVPTSGNTIESPLHENISNSTSFKDEKIMETDSEPEE 370



 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 18/123 (14%)

Query: 671 LHKQNMDIYRRSRLSEQELE-ALELRERE-------MKYRDRAAERREKYGIPEPPEPKR 722
           L K+  ++ RR  L +  ++  L+  E E        KY+DRA +RRE+ G     E   
Sbjct: 549 LSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQVG----SEGTF 604

Query: 723 KKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGA 782
           ++     +V+ E      I  SN G KML+ MGW++G GLG+   G+  PI+ Q+R   A
Sbjct: 605 QRDDAPASVHSE------ITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHA 658

Query: 783 GLG 785
           GLG
Sbjct: 659 GLG 661


>gi|8922313 G patch domain containing 2 [Homo sapiens]
          Length = 528

 Score = 61.2 bits (147), Expect = 4e-09
 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 19/124 (15%)

Query: 662 LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPK 721
           L+R  +    HK+N  +   SR +   L +L     ++K R +AA       +P P    
Sbjct: 405 LLRDNRAERGHKKNCSVRTASRQTSMHLGSL--CTGDIKRRRKAAP------LPGPT--- 453

Query: 722 RKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKG 781
                   T  +       I  +NIGN+MLQ MGW  GSGLGR  +GI+ PI+A  R KG
Sbjct: 454 --------TAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKG 505

Query: 782 AGLG 785
            GLG
Sbjct: 506 LGLG 509


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 55/274 (20%), Positives = 114/274 (41%), Gaps = 62/274 (22%)

Query: 47  RGDRYDDYR---DYDSPERERERRNSDRSEDGYHSDGDYGEH-DYRHDISD--ERESKTI 100
           +G  Y +++   D +    E++    D      +  G+ G++ DYR   +     ESKT+
Sbjct: 429 KGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTL 488

Query: 101 MLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEAN 160
           +L  L  + TE  ++E+ E     +   +++ + + G S+G+AF+EF   +DA   + + 
Sbjct: 489 VLSNLSYSATEETLQEVFE-----KATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 543

Query: 161 QKKLVIQGKHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTT 220
            K+  I+G+ I +    PR                         G+    S+        
Sbjct: 544 NKR-EIEGRAIRLELQGPR-------------------------GSPNARSQPS------ 571

Query: 221 ESVQSVDYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQ 280
                      T+ ++ ++  T  +++  +            R++ D++T  ++GF FV 
Sbjct: 572 ----------KTLFVKGLSEDTTEETLKESFDGSV-----RARIVTDRETGSSKGFGFVD 616

Query: 281 LSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAK 314
            +S  DA    + ++      +IDG  + +D+AK
Sbjct: 617 FNSEEDAKAAKEAMED----GEIDGNKVTLDWAK 646



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 46/202 (22%)

Query: 90  DISDERESKTIMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYH 149
           D   ER+++T++ + LP  +T+ +++E+ E       A++RL+  K G S+G A++EF  
Sbjct: 385 DSKKERDARTLLAKNLPYKVTQDELKEVFE-----DAAEIRLVS-KDGKSKGIAYIEFKT 438

Query: 150 LQDATSWMEANQKKLVIQGKHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRCGADKF 209
             DA    E  Q    I G+ I+++Y+  + + +D+   K                    
Sbjct: 439 EADAEKTFEEKQ-GTEIDGRSISLYYTGEKGQNQDYRGGK-------------------- 477

Query: 210 DSEQEVPPGTTESVQSVDYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQ 269
                    +T S +S      T++L N++     +++         + V         Q
Sbjct: 478 --------NSTWSGES-----KTLVLSNLSYSATEETLQEVFEKATFIKV------PQNQ 518

Query: 270 TQQNRGFAFVQLSSAMDASQLL 291
             +++G+AF++ +S  DA + L
Sbjct: 519 NGKSKGYAFIEFASFEDAKEAL 540



 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 97  SKTIMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSW 156
           SKT+ ++GL    TE  ++E   SF+G   A + +  R+TG S+GF FV+F   +DA + 
Sbjct: 571 SKTLFVKGLSEDTTEETLKE---SFDGSVRARI-VTDRETGSSKGFGFVDFNSEEDAKAA 626

Query: 157 MEANQKKLVIQGKHIAMHYSNPR 179
            EA +    I G  + + ++ P+
Sbjct: 627 KEAMEDG-EIDGNKVTLDWAKPK 648


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 15/224 (6%)

Query: 510 ESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQ---KENFKNSFQPVN 566
           E   H+Q      +E + K+E+ + +   +  ++ ER  +   KQ   ++  +   +   
Sbjct: 430 EEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWL 489

Query: 567 SLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDN 626
            L EEERRE            ++    E+++   + ++  +EE  L++ L +      + 
Sbjct: 490 KLEEEERREQQER-------REQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQ 542

Query: 627 EEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQ--LSDLHKQNMDIYRRSRL 684
           EE   + L+ EEEK  + ++    L R Q   +D L++ ++       K+  +     RL
Sbjct: 543 EERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRL 602

Query: 685 SEQELEAL---ELREREMKYRDRAAERREKYGIPEPPEPKRKKQ 725
             +E+E L   E RE+ +K  +   ERR++    E  E +R++Q
Sbjct: 603 KREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQ 646



 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 40/203 (19%), Positives = 86/203 (42%), Gaps = 14/203 (6%)

Query: 523 KEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAG 582
           +E +E++E+ + +  QQ+ ++ E   +   ++++  +   Q +   +EEERRE       
Sbjct: 322 REQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQ 381

Query: 583 FALFE----------KKGALAERQQLIPELVRNGDE----ENPLKRGLVAAYSGDSDNEE 628
               E          ++  L   QQL  E     ++    E  L+R            +E
Sbjct: 382 QLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQE 441

Query: 629 ELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQE 688
              +RL+ E+E+  DW K      R +   +   ++  Q  +  ++ + +    R  +QE
Sbjct: 442 RREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQE 501

Query: 689 LEALELREREMKYRDRAAERREK 711
               +LR  + + R++  +R+E+
Sbjct: 502 RREQQLRREQEERREQRLKRQEE 524



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 40/194 (20%), Positives = 83/194 (42%), Gaps = 19/194 (9%)

Query: 523 KEGKEKKEKPKSKTAQQIAKDMER--WAKS---LNKQKENFKNSFQPVNSLREEERRESA 577
           ++G+E+K++ + +   ++ ++ E   W K    L K++E  +          EE +R+  
Sbjct: 220 RKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQE---------EEPQRQRE 270

Query: 578 AADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESE 637
             +      E++    ERQ+L  E      ++  L+R        + +  E+  ER E +
Sbjct: 271 LQEE-----EEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQ 325

Query: 638 EEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELRER 697
           E +    ++    L R Q   ++  +R +Q  +  +Q +   +     EQ+L   +   R
Sbjct: 326 ERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRR 385

Query: 698 EMKYRDRAAERREK 711
           E + R     RRE+
Sbjct: 386 EQQLRREQQLRREQ 399



 Score = 41.2 bits (95), Expect = 0.004
 Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 34/250 (13%)

Query: 526  KEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFAL 585
            + ++   K +  +Q  +  ER  K L ++++  +   +     REEE+            
Sbjct: 1685 RRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELE--RKFREEEQLRQETEQEQLRR 1742

Query: 586  FEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWK 645
             E+   + E +QL PE      EE  L+R        D    EE   R E EE++L   +
Sbjct: 1743 QERYRKILEEEQLRPER-----EEQQLRR-----QERDRKFREEEQLRQEREEQQLRSQE 1792

Query: 646  KMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRA 705
                    R+F  ++ L + ++   L  Q  D   R    + +LE  E R R+ + R   
Sbjct: 1793 S------DRKFREEEQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQYR 1846

Query: 706  AE---------RREKYGIPEPPEPKRKKQFD--AGTVNYEQPTKDGIDHSNIGNKMLQAM 754
            AE         RRE+  + +  E KR+++ +      +  +  K+   H  +G    Q  
Sbjct: 1847 AEEQFATQEKSRREEQELWQEEEQKRRQERERKLREEHIRRQQKEEQRHRQVGEIKSQ-- 1904

Query: 755  GWREGSGLGR 764
               EG G GR
Sbjct: 1905 ---EGKGHGR 1911



 Score = 40.8 bits (94), Expect = 0.005
 Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 35/247 (14%)

Query: 501 EKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKN 560
           E+E      +    Q+  L   +E  EK+E+ + +  Q+  +D E W +         + 
Sbjct: 130 EEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQR--RDEELWRQ---------RQ 178

Query: 561 SFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAY 620
            +Q     R EE +  +        F  +  L  R+ L  EL R G EE   +R      
Sbjct: 179 EWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELL--ELRRKGREEKQQQRRERQDR 236

Query: 621 SGDSDNEEELVER---LESEEEKLAD---------------WKKMACLLCRRQFPNKDA- 661
               + E+E  +R   L  EEEKL +                +K+     RR+   ++  
Sbjct: 237 VFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQ 296

Query: 662 ---LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPP 718
              L R QQL    ++     +  R  +QE    +   RE + R    ERRE+    E  
Sbjct: 297 QQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQE 356

Query: 719 EPKRKKQ 725
           E +R++Q
Sbjct: 357 EERREQQ 363



 Score = 38.5 bits (88), Expect = 0.025
 Identities = 46/248 (18%), Positives = 101/248 (40%), Gaps = 26/248 (10%)

Query: 496 LYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQK 555
           L W  E+  +    E    +        E K ++ + +      + +  ER  ++  +Q+
Sbjct: 746 LQWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQ 805

Query: 556 ENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRG 615
              +  F P    +E+ RR+    +      E++  L  R++      +  +EE+ L+  
Sbjct: 806 R--EQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRER----AQQLQEEEDGLQED 859

Query: 616 LVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQN 675
                S +   +++   +LE EE K       A    + Q   +  L++ ++  +L ++ 
Sbjct: 860 QERRRSQEQRRDQKWRWQLE-EERKRRRHTLYAKPALQEQLRKEQQLLQEEE-EELQREE 917

Query: 676 MDIYRR-----------------SRLSEQELEALELREREMKYR-DRAAERREKYGIPEP 717
            +  RR                  +L  +E E    +ERE +YR D+  +++E+  + E 
Sbjct: 918 REKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEE 977

Query: 718 PEPKRKKQ 725
           PE +R+++
Sbjct: 978 PEKRRRQE 985



 Score = 38.5 bits (88), Expect = 0.025
 Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 36/214 (16%)

Query: 521  PAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQ---PVNSLREEERRESA 577
            PA + + +KE+   +  ++  +  ER  +   +Q+  ++   Q       L  EER +  
Sbjct: 893  PALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRR 952

Query: 578  AADAGFALFEKKGALAERQQLI---PELVRNGDEENPLKRGLVAAYSGDSDNEEELVERL 634
              +      + K    + +QL+   PE  R  + E   +         +   EEE + R 
Sbjct: 953  RQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYRE------EEELQQEEEQLLRE 1006

Query: 635  ESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALEL 694
            E E+ +  +W+        RQ+  KD L + ++               +L  +E E   L
Sbjct: 1007 EREKRRRQEWE--------RQYRKKDELQQEEE---------------QLLREEREKRRL 1043

Query: 695  REREMKYR-DRAAERREKYGIPEPPEPKRKKQFD 727
            +ERE +YR +   ++ E+  + E  E +R+++ +
Sbjct: 1044 QERERQYREEEELQQEEEQLLGEERETRRRQELE 1077



 Score = 37.0 bits (84), Expect = 0.074
 Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 20/203 (9%)

Query: 528 KKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFE 587
           K E+ + +  QQ+ ++ +   +   K++E  +   Q +    EEERRE   A+      E
Sbjct: 635 KSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEE-----E 689

Query: 588 KKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKM 647
           ++ A    +  IP+     + E   ++  V  YS     E +   R E EE++     ++
Sbjct: 690 QEQARERIKSRIPKWQWQLESEADARQSKV--YSRPRKQEGQR-RRQEQEEKRRRRESEL 746

Query: 648 ACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELR-----EREMKYR 702
                  Q+  ++   R QQ  +  +     ++    SE+  + L  R     +RE + R
Sbjct: 747 -------QWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLR 799

Query: 703 DRAAERREKYGIPEPPEPKRKKQ 725
               ++RE+  +PE  E +++++
Sbjct: 800 AEERQQREQRFLPEEEEKEQRRR 822



 Score = 36.6 bits (83), Expect = 0.096
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 9/207 (4%)

Query: 510  ESSSHQQSGLPPAKEG----KEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPV 565
            E   HQ+ G    +E     ++++E+   K  QQ+ +  ER  +    +   F+   Q +
Sbjct: 1365 EELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQL-RCQEREQQLRQDRDRKFREEEQQL 1423

Query: 566  NSLREEERRESAAADAGFALFEKKGA-LAERQQLIPELVRNGDEENPLKRGLVAAYSGDS 624
            +  R+E  R+    +      E++   L E QQL  E  R   EE  L +          
Sbjct: 1424 S--RQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFREEEQLLQEREEQQLHRQ 1481

Query: 625  DNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRL 684
            + + + +E  +    +  D +K      R Q P +  L   QQL    +Q   +    +L
Sbjct: 1482 ERDRKFLEEEQQLRRQERD-RKFREQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQL 1540

Query: 685  SEQELEALELREREMKYRDRAAERREK 711
              QE      ++R+ K+R+    R+E+
Sbjct: 1541 RRQERGQQRRQDRDRKFREEEQLRQER 1567



 Score = 35.0 bits (79), Expect = 0.28
 Identities = 48/243 (19%), Positives = 95/243 (39%), Gaps = 39/243 (16%)

Query: 501  EKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQ-------------QIAKDMERW 547
            ++E  + A E    +Q  LP  +E ++++ + + +  +             + A+ ++  
Sbjct: 793  QRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEE 852

Query: 548  AKSLNKQKENFKNSFQPVNS-----LREEERRESAAADAGFALFEKKGALAERQQLIPEL 602
               L + +E  ++  Q  +      L EE +R      A  AL E+   L + QQL+ E 
Sbjct: 853  EDGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQ---LRKEQQLLQEE 909

Query: 603  VRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDAL 662
                  E   KR        + + +    E+L+ EEE+L                 ++  
Sbjct: 910  EEELQREEREKRR-----RQEQERQYREEEQLQQEEEQLLR-------------EEREKR 951

Query: 663  VRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKR 722
             R ++     K      +  +L  +E E    +ERE KYR+    ++E+  +      KR
Sbjct: 952  RRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKR 1011

Query: 723  KKQ 725
            ++Q
Sbjct: 1012 RRQ 1014



 Score = 33.9 bits (76), Expect = 0.62
 Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 15/214 (7%)

Query: 510  ESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLR 569
            E    QQ      +E +EK+ + + +   +  +++++  + L +++   +   +     R
Sbjct: 1112 EEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYR 1171

Query: 570  EEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEE 629
            EEE  +           E++    E+++   E  R   EE  L+R        D D   +
Sbjct: 1172 EEEELQQE---------EEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSD 1222

Query: 630  LVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQEL 689
            L  + E E+E      K+    C+ +   +   +   QL D   Q  D+  +  L EQ+ 
Sbjct: 1223 LKWQWEPEKENAVRDNKV---YCKGRENEQFRQLEDSQLRDRQSQQ-DL--QHLLGEQQE 1276

Query: 690  EALELREREMKYRDRAAERREKYGIPEPPEPKRK 723
               E   R  + RDR     E+    E  E KR+
Sbjct: 1277 RDREQERRRWQQRDRHFPEEEQLEREEQKEAKRR 1310



 Score = 32.7 bits (73), Expect = 1.4
 Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 16/213 (7%)

Query: 528  KKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFE 587
            K +K + K  Q + ++ E+  +   ++K   +   Q        E RE          + 
Sbjct: 962  KDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYR 1021

Query: 588  KKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKM 647
            KK  L + ++   +L+R   E+  L+         + + +    E L+ EEE+L   ++ 
Sbjct: 1022 KKDELQQEEE---QLLREEREKRRLQ---------ERERQYREEEELQQEEEQLLGEERE 1069

Query: 648  ACLL--CRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRA 705
                    RQ+  ++ L   Q+   L ++  +  RR     Q  E  EL++ E +     
Sbjct: 1070 TRRRQELERQYRKEEEL--QQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREE 1127

Query: 706  AERREKYGIPEPPEPKRKKQFDAGTVNYEQPTK 738
             E+R +  +      + + Q +   +  E+P K
Sbjct: 1128 REKRRRQELERQYREEEEVQQEEEQLLREEPEK 1160



 Score = 32.7 bits (73), Expect = 1.4
 Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 21/213 (9%)

Query: 526  KEKKEKPKSKTAQQIAKDMERWAKSLNKQK----ENFKNSFQPVNSLREEERRESAAADA 581
            +E+++  + +  QQ+++        L +QK    E  +   +    LR +E ++    + 
Sbjct: 1558 REEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQER 1617

Query: 582  GFALFEKKGALAER--QQLI-PELVRNGDEENPLKRGLVAAYSGDSDN------EEELVE 632
                 E +  L ER  QQL   E  R   EE P  R          D       EE+L++
Sbjct: 1618 DRKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQ 1677

Query: 633  RLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEAL 692
              E EE++L   ++       R+F  ++  +R Q+      Q     RR  L  +  E  
Sbjct: 1678 --EGEEQQLRRQER------DRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEE 1729

Query: 693  ELREREMKYRDRAAERREKYGIPEPPEPKRKKQ 725
            +LR+   + + R  ER  K    E   P+R++Q
Sbjct: 1730 QLRQETEQEQLRRQERYRKILEEEQLRPEREEQ 1762



 Score = 32.0 bits (71), Expect = 2.4
 Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 39/252 (15%)

Query: 510  ESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLN--KQKENFKNSFQPVNS 567
            +    Q  G  P K  ++++EK K +  +++ ++ E+  +     ++++ ++  ++  + 
Sbjct: 967  QQKEEQLLGEEPEKRRRQEREK-KYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDE 1025

Query: 568  LREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRG--LVAAYSGDSD 625
            L++EE +          L E++    E ++L  E  +   EE   +R   L   Y  + +
Sbjct: 1026 LQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEE 1085

Query: 626  ---NEEELV-------------------ERLESEEEKLA--DWKKMACLLCRRQF----- 656
                EE+L+                   E L+ EEE+L   + +K       RQ+     
Sbjct: 1086 LQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEE 1145

Query: 657  --PNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGI 714
                ++ L+R +      ++    YR     +QE E L   E+E + ++R  + RE+   
Sbjct: 1146 VQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREE--- 1202

Query: 715  PEPPEPKRKKQF 726
             E    KRK+++
Sbjct: 1203 EELQRQKRKQRY 1214



 Score = 32.0 bits (71), Expect = 2.4
 Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 32/203 (15%)

Query: 526  KEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVN-SLREEERRESAAADAGFA 584
            +E++EK + +  +Q  ++ E   +   K+K+ +++  Q  +   + E  +E+A  D    
Sbjct: 1185 REEQEKRRQERERQYREEEELQRQ---KRKQRYRDEDQRSDLKWQWEPEKENAVRDN--K 1239

Query: 585  LFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNE-------------EELV 631
            ++ K     + +QL    +R+   +  L+  L      D + E             EE +
Sbjct: 1240 VYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEEEQL 1299

Query: 632  ERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSR---LSEQE 688
            ER E +E K  D          R+   +  L+R ++     +Q  D   R     L E+E
Sbjct: 1300 EREEQKEAKRRD----------RKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQERE 1349

Query: 689  LEALELREREMKYRDRAAERREK 711
             + L  +ER+ K+R+     +E+
Sbjct: 1350 EQPLRRQERDRKFREEELRHQEQ 1372


>gi|9558733 transformer-2 alpha [Homo sapiens]
          Length = 282

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 12/180 (6%)

Query: 2   GSDKRVSRTERSG-RYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP 60
           G+  RV    RSG R  S + +       SRS+ R    + S       RY   R +   
Sbjct: 23  GTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHR-----RYTRSRSHSHS 77

Query: 61  ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKT----IMLRGLPITITESDIRE 116
            R R R  S   E        +     R   +  R +      + + GL +  TE D+RE
Sbjct: 78  HRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLRE 137

Query: 117 MMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYS 176
           +   + GP      +  ++TG SRGFAFV F  + D+   ME     + + G+ I + YS
Sbjct: 138 VFSRY-GPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME-RANGMELDGRRIRVDYS 195



 Score = 37.0 bits (84), Expect = 0.074
 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 241 HTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPP 300
           +T    +    S Y  L+   + ++ D++T ++RGFAFV      D+ + ++        
Sbjct: 129 YTTERDLREVFSRYGPLS--GVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG---- 182

Query: 301 LKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSY 360
           +++DG+ I VD++ + R     +       +    T              G GG    SY
Sbjct: 183 MELDGRRIRVDYSITKR-----AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSY 237

Query: 361 LQPGQD-GYAQYAQYSQDYQQ 380
              G D GY +Y  Y   Y++
Sbjct: 238 YDRGYDRGYDRYEDYDYRYRR 258


>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapiens]
          Length = 1082

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 718  PEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
            P  K+KK  D      +   K      N+G +MLQ MGW+EG GLG   +GI  P+    
Sbjct: 992  PMSKKKKPKDLDFAQQKLTDK------NLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGT 1045

Query: 778  RLKGAGLGAKGSAY 791
              +G GLGA G  +
Sbjct: 1046 PSEGEGLGADGQEH 1059


>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapiens]
          Length = 1082

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 718  PEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQV 777
            P  K+KK  D      +   K      N+G +MLQ MGW+EG GLG   +GI  P+    
Sbjct: 992  PMSKKKKPKDLDFAQQKLTDK------NLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGT 1045

Query: 778  RLKGAGLGAKGSAY 791
              +G GLGA G  +
Sbjct: 1046 PSEGEGLGADGQEH 1059


>gi|50962882 G patch domain containing 8 [Homo sapiens]
          Length = 1502

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 725 QFDAGTVNYEQPTKDG-IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAG 783
           Q++ G +  EQ + D  I+  NIG+++LQ  GW+ G GLG+  QG T PI   V+    G
Sbjct: 21  QYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMG 80

Query: 784 LG 785
           +G
Sbjct: 81  MG 82



 Score = 31.2 bits (69), Expect = 4.0
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 2   GSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDD-YRDYDSP 60
           GS+   SR+ RSGR  S      R  R S S   D+   +S   R+    DD Y DY   
Sbjct: 846 GSEHSRSRS-RSGRRHS----SHRSSRRSYSSSSDASSDQSCYSRQRSYSDDSYSDYSDR 900

Query: 61  ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDE 94
            R   +R S  S+D  ++   +    +++  SD+
Sbjct: 901 SRRHSKR-SHDSDDSDYASSKHRSKRHKYSSSDD 933


>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
          Length = 837

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 680 RRSRLSEQELEALELREREMKYRDRAAE---RREKYGIPEPPEPKRKKQFDAGTVNYEQP 736
           ++    E ELE  +  E+ +K  D   +   R+ K G    P    +K F  GT ++   
Sbjct: 86  KKGAAEEAELEDSDDEEKPVKQDDFPKDFGPRKLKTGGNFKPS---QKGFAGGTKSFMDF 142

Query: 737 TKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGS 789
                    IG K+LQ MG+  G GLG+  QGI  PIEA+ R     +GA GS
Sbjct: 143 GSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGS 195


>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
          Length = 837

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 680 RRSRLSEQELEALELREREMKYRDRAAE---RREKYGIPEPPEPKRKKQFDAGTVNYEQP 736
           ++    E ELE  +  E+ +K  D   +   R+ K G    P    +K F  GT ++   
Sbjct: 86  KKGAAEEAELEDSDDEEKPVKQDDFPKDFGPRKLKTGGNFKPS---QKGFAGGTKSFMDF 142

Query: 737 TKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGS 789
                    IG K+LQ MG+  G GLG+  QGI  PIEA+ R     +GA GS
Sbjct: 143 GSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGS 195


>gi|33469964 splicing factor 4 [Homo sapiens]
          Length = 645

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 15/133 (11%)

Query: 693 ELREREMKYRDRAAERREKYGIPE-------PPEPKRK-----KQFDAGTV-NYEQPTKD 739
           +LR  EM      AE+  K G  +       PP+   K     K    G   +Y +  + 
Sbjct: 499 QLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEF 558

Query: 740 GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPI-EAQVRLKGAGLGAKGSAYGLSGADS 798
            +   NIG +ML  MGW+EG GLG + QGI  P+ +    + GAG G    A  LS  D 
Sbjct: 559 KLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPA-ELSKEDD 617

Query: 799 YKDAVRKAMFARF 811
             +A RK M   +
Sbjct: 618 EYEAFRKRMMLAY 630


>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
          Length = 288

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 8/170 (4%)

Query: 12  RSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDR-YDDYRDYDSPERERERRNSD 70
           +S R+     R   D R SRS+ R     RS   R   R Y   R      R    R+  
Sbjct: 28  KSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYS 87

Query: 71  RSEDGYHSDGDYGEHDYRHDISDERE---SKTIMLRGLPITITESDIREMMESFEGPQPA 127
           R     HS         R  + +      +  + + GL +  TE D+RE+   + GP  A
Sbjct: 88  RDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKY-GP-IA 145

Query: 128 DVRLM-KRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYS 176
           DV ++  +++  SRGFAFV F ++ DA    E     + + G+ I + +S
Sbjct: 146 DVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE-RANGMELDGRRIRVDFS 194



 Score = 37.7 bits (86), Expect = 0.043
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 241 HTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPP 300
           +T    +    S Y  +A  ++ ++ D+Q++++RGFAFV   +  DA +  +        
Sbjct: 128 YTTERDLREVFSKYGPIA--DVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG---- 181

Query: 301 LKIDGKTIGVDFAKSAR 317
           +++DG+ I VDF+ + R
Sbjct: 182 MELDGRRIRVDFSITKR 198


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 34/247 (13%)

Query: 507 PAAESSSHQQSGLPPAKEGKEKKEKPKSKTA-----------QQIAKDMERWAKSLNKQK 555
           P+        S LPP  +   ++  P  + A           QQ+A + E W K   +Q+
Sbjct: 394 PSFNQERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIW-KQRRRQQ 452

Query: 556 ENFKNSFQPVNSLREEE------RRESAAADAGFALFEKKGALAERQQLIPELVRNGDEE 609
                + +     REEE      +R++A A+    L EK G L   +Q  PE +R  + E
Sbjct: 453 SEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGIL--EKQPSPEEIRERERE 510

Query: 610 NPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLS 669
              +R        + + E+E  +  E ++EK  + +K            K   +  ++  
Sbjct: 511 KEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQ---------EKQREMEKERKQ 561

Query: 670 DLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPP-EPKRKKQFDA 728
           +  K+      R +  E+EL+ ++ +E+E +      +  EK    EP  EP  +KQ   
Sbjct: 562 EKEKE----LERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESE 617

Query: 729 GTVNYEQ 735
            + N E+
Sbjct: 618 NSCNKEE 624



 Score = 34.3 bits (77), Expect = 0.48
 Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 21/234 (8%)

Query: 499 DGEKETYVPAAESSSHQQSGLPPAKEGK-EKKEKPKSKTAQQI------AKDMERWAKSL 551
           D E+ +  P   +S  Q S      E K E  E   +K++ QI      AK       S 
Sbjct: 337 DDEQGSNSPKENNSEDQGSKASENNENKKETDEVSNTKSSSQIPAQPSVAKVPYGKGPSF 396

Query: 552 NKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENP 611
           N+++    +   P   L ++       A  G     + G    +QQ+  E     DE   
Sbjct: 397 NQERGTSSHLPPPPKLLAQQHPPPDRQAVPG-----RPGPFPSKQQVADE-----DEIWK 446

Query: 612 LKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDL 671
            +R      S  S   E   +R E EE ++ + +K AC    ++   K  ++  Q   + 
Sbjct: 447 QRR---RQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEE 503

Query: 672 HKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQ 725
            ++      R R  E E E  + RE+E + +DR  ++ ++  + +  E +R+ +
Sbjct: 504 IREREREKEREREKELEKEQEQEREKE-REKDRERQQEKEKELEKEQEKQREME 556


>gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 1
           [Homo sapiens]
          Length = 621

 Score = 46.6 bits (109), Expect = 9e-05
 Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 35/174 (20%)

Query: 522 AKEGKEKKEKPKSKTAQQIAKDMERWAK----SLNKQKENFKNSFQPVNSLREEERRESA 577
           AK+  EKK K ++K  +Q AK+ +R A+     L K+KE             EEE R+ A
Sbjct: 289 AKKEAEKKAKAEAKRKEQEAKEKQRQAELEAARLAKEKE-------------EEEVRQQA 335

Query: 578 AADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESE 637
                    +KK    ERQ+L               R     ++  SDNE E V+ +E E
Sbjct: 336 LLAKKEKDIQKKAIKKERQKL---------------RNSCKTWNHFSDNEAERVKMME-E 379

Query: 638 EEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEA 691
            EKL D  ++A L C  +     +  +    + L KQ  +I  + R  ++E EA
Sbjct: 380 VEKLCDRLELASLQCLNE--TLTSCTKEVGKAALEKQIEEINEQIRKEKEEAEA 431


>gi|148747556 PIN2-interacting protein 1 [Homo sapiens]
          Length = 328

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 22/45 (48%), Positives = 28/45 (62%)

Query: 742 DHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGA 786
           D S  G +ML+ MGW +G GLG + QG T  I+ QV+    GLGA
Sbjct: 25  DDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGA 69


>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
           protein 6 [Homo sapiens]
          Length = 724

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 41/231 (17%), Positives = 105/231 (45%), Gaps = 29/231 (12%)

Query: 493 QQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEK--PKSKTAQQIAKDMERWAKS 550
           Q+ + W  EKE  +   E   H+Q  +   +E ++++EK   + K  +Q AK M R  + 
Sbjct: 429 QEEMMW--EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAK-MWRQEEK 485

Query: 551 LNKQKENFKNSFQPV----------NSLREEERRESAAADAGFALFEKKGALAERQQLIP 600
           + +Q+E  +   + +            +REEE+R+         ++ ++  + E++++  
Sbjct: 486 IREQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQE-----EMWRQEEKIREQEEIWR 540

Query: 601 ELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKD 660
           +  +  ++E  +++     +  +    ++  E++  +EEK+  W++        +   ++
Sbjct: 541 QKEKIHEQEEKIRKQEEKMWRQEEKMHDQ-EEKIREQEEKV--WRQ------EEKIREQE 591

Query: 661 ALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREK 711
             +R Q+     ++ M   +  ++ EQE +  E  E+  +  ++   + EK
Sbjct: 592 EKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEK 642



 Score = 38.5 bits (88), Expect = 0.025
 Identities = 39/194 (20%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 544 MERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLI---P 600
           ++ W + + +Q+E  +   + +    E+ RR+         ++EK+  +  +++++    
Sbjct: 370 IQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEM------MWEKEEKMRRQEEMMWEKE 423

Query: 601 ELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLES--EEEKLADWKK---MACLLCRRQ 655
           E +R  +E    K   +         +E++ E+ E   EEEK+ + +K       + R++
Sbjct: 424 EKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQE 483

Query: 656 --FPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQEL--EALELREREMKYRDRAAERREK 711
                ++  +R Q+   + +Q   I+ + ++ E+E   E  E+  +E K R++    R+K
Sbjct: 484 EKIREQEEKIREQE-EKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQK 542

Query: 712 YGIPEPPEPKRKKQ 725
             I E  E  RK++
Sbjct: 543 EKIHEQEEKIRKQE 556


>gi|63003897 transcription factor NRF [Homo sapiens]
          Length = 690

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 734 EQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785
           E+  K  I   NIGN++L+ MGW  G GLG+  +GI  PI  + + K  GLG
Sbjct: 542 EEAYKQQIKEDNIGNQLLRKMGW-TGGGLGKSGEGIREPISVKEQHKREGLG 592


>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 668

 Score = 44.3 bits (103), Expect = 5e-04
 Identities = 46/232 (19%), Positives = 110/232 (47%), Gaps = 21/232 (9%)

Query: 501 EKETYVPAAESSSHQQSGLPPAKEGKEKKEK--PKSKTAQQIAKDMERWAKSLNKQKENF 558
           EKE  +   E   H+Q  +   +E ++++EK   + K  +Q AK M R  + + +Q+E  
Sbjct: 374 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAK-MWRQEEKIREQEEKI 432

Query: 559 ----KNSFQPVNSLREEER-RESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLK 613
               K  ++    + E+E+ RE         ++ ++  + E++++  +  +  ++E   K
Sbjct: 433 REQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRK 492

Query: 614 RGLVAAYSGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHK 673
           +        +  +++E  E++  +EEK+  W++        +   ++  +R Q+     +
Sbjct: 493 QEEKVWRQEEKMHDQE--EKIREQEEKM--WRQ------EEKIREQEEKIREQEEKIREQ 542

Query: 674 QNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQ 725
           + M   +  ++ EQE E ++ +E+  +  ++  E+ EK  I E  E  R+++
Sbjct: 543 EEMMQEQEEKMGEQE-EKMQEQEKMRRQEEKIREQEEK--IREQKEKIREQE 591



 Score = 33.5 bits (75), Expect = 0.81
 Identities = 35/194 (18%), Positives = 91/194 (46%), Gaps = 19/194 (9%)

Query: 544 MERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLI---P 600
           ++ W + + +Q+E  +   + +    E+ RR+         ++EK+  +  +++++    
Sbjct: 309 IQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEE------MMWEKEEKMRRQEEMMWEKE 362

Query: 601 ELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLE--SEEEKLADWKK---MACLLCRRQ 655
           E +R  +E    K   +         +E++ E+ E   EEEK+ + +K       + R++
Sbjct: 363 EKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQE 422

Query: 656 --FPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQE--LEALELREREMKYRDRAAERREK 711
                ++  +R Q+   + +Q   I+ + ++ E+E   E  E+  +E K R++    R+K
Sbjct: 423 EKIREQEEKIREQE-KKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQK 481

Query: 712 YGIPEPPEPKRKKQ 725
             + E  + +++++
Sbjct: 482 EKMHEQEKIRKQEE 495


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 41/259 (15%)

Query: 506 VPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPV 565
           +PA+E  +   +      EG +KK+  K K  ++  K+ E   K     K   K   + +
Sbjct: 292 IPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKE---KKKGPSKATVKAMQEAL 348

Query: 566 NSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSD 625
             L+EEE R+    +             ER + + EL     EE  L++           
Sbjct: 349 AKLKEEEERQKREEE-------------ERIKRLEELEAKRKEEERLEQ---EKRERKKQ 392

Query: 626 NEEELVERLESEEEKLADWKKMACLLCRR----------QFPNKDALVRHQQLSDLHKQN 675
            E+E  ERL+ E + L   ++ A                + P+KD+L + + + +  K+ 
Sbjct: 393 KEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKR- 451

Query: 676 MDIYRRSRLSEQELEALELRE-REMKYRDRAAER--REKYGIPEPPEPKRKKQF-DAGTV 731
                  +   Q+LE+ E+ E  E+       E+   EK   P P EP+ ++   DAG  
Sbjct: 452 -------KKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLD 504

Query: 732 NYEQPTKDGIDHSNIGNKM 750
           ++E    D       GNK+
Sbjct: 505 DWEAMASDEETEKVEGNKV 523



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 13/71 (18%)

Query: 4   DKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERE 63
           D++VS  + SG+          D++ S+    DS+Y   SDD   DR  + R YD  +R 
Sbjct: 566 DEKVSDEKDSGK--------TLDKKPSKEMSSDSEY--DSDD---DRTKEERAYDKAKRR 612

Query: 64  RERRNSDRSED 74
            E+R  + S++
Sbjct: 613 IEKRRLEHSKN 623


>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing B [Homo sapiens]
          Length = 546

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 4   DKRVSRTERSGRYGSIIDRD-DRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPER 62
           ++  SR+    R G   DRD +R++   R RRRD DY    D  RG+  +  R     ER
Sbjct: 334 ERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDY----DKERGNEREKER-----ER 384

Query: 63  ERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESK 98
            RER    RS           + D R    D+R+SK
Sbjct: 385 SRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSK 420



 Score = 36.6 bits (83), Expect = 0.096
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 14/93 (15%)

Query: 4   DKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERE 63
           ++     E+  R    IDR   + R SRSR R     RS D R+GDR D        +RE
Sbjct: 305 EREAKEREKERRRSRSIDRG-LERRRSRSRERHRSRSRSRD-RKGDRRDR-------DRE 355

Query: 64  RERRNSDRSEDGYHSDGDYGEHDYRHDISDERE 96
           RE+ N    E G   D DY + +  ++   ERE
Sbjct: 356 REKEN----ERGRRRDRDY-DKERGNEREKERE 383



 Score = 35.4 bits (80), Expect = 0.21
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 8   SRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYD-SPERERER 66
           SR+  +G+      ++   + ++ S+ + +   RS    R D  +  +  + SP +E+ R
Sbjct: 439 SRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSR 498

Query: 67  RNS---DRSEDGYHSDG--DYGEHDYRHDISDERESK 98
           + S   +RS    HSD      +HD R   S E+ES+
Sbjct: 499 KRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQ 535



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 4   DKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERE 63
           ++R    ERS       ++  R E E +  + D D +R  DD+R D   + +   S  RE
Sbjct: 376 NEREKERERSRERSK--EQRSRGEVEEKKHKEDKDDRRHRDDKR-DSKKEKKHSRSRSRE 432

Query: 64  RERRNSDRSED-GYHSDGDYGEHDYRHDISDERES 97
           R+ R+  RS + G  S     E   +H    + +S
Sbjct: 433 RKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKS 467



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 6   RVSRTERSGRYGSIIDRDDRD-ERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERER 64
           R SR+    R G      DR+ ERE   +R + + K    +RR  R  D        R R
Sbjct: 274 RRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSR 333

Query: 65  ER-RNSDRSEDGYHSDGDYGEHDYRHDISDER 95
           ER R+  RS D     GD  + D   +  +ER
Sbjct: 334 ERHRSRSRSRD---RKGDRRDRDREREKENER 362


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 63/331 (19%), Positives = 116/331 (35%), Gaps = 66/331 (19%)

Query: 402 TTTSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTST 461
           T T A++   S ++ N T+    +  EE   S                   +Y + +T T
Sbjct: 124 TITDASLSLPSRRMQNDTAENETTEKEEKSESRQE----------------RYEIEETET 167

Query: 462 YQYDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPP 521
                    + D       D   +       ++    + + E  V    + S +++ +  
Sbjct: 168 VTKSYQKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQEETVVMS 227

Query: 522 AKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADA 581
            K G+   E+PK +                 +++E   +       + EE++  + A  A
Sbjct: 228 LKNGQISSEEPKQE-----------------EEREQGSDEISHHEKMEEEDKERAEAERA 270

Query: 582 GFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEELVERLESEEEKL 641
                E++   AE+ + I       DE   ++    AA       E E  ER+  EE++ 
Sbjct: 271 RLEAEERERIKAEQDKKI------ADERARIEAEEKAAAQERERREAEERERMREEEKRA 324

Query: 642 ADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKY 701
           A+                      Q++ +  K+  +   R R+ E+E  A E R+R  + 
Sbjct: 325 AE--------------------ERQRIKEEEKRAAE--ERQRIKEEEKRAAEERQRIKEE 362

Query: 702 RDRAAERREKYGIPEP-----PEPKRKKQFD 727
             RAAE R++    E       E KR KQ +
Sbjct: 363 EKRAAEERQRARAEEEEKAKVEEQKRNKQLE 393



 Score = 35.4 bits (80), Expect = 0.21
 Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 22/201 (10%)

Query: 501 EKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKN 560
           E+E    + E S H+       K  +E KE+ +++ A+  A++ ER     +K+  + + 
Sbjct: 241 EEEREQGSDEISHHE-------KMEEEDKERAEAERARLEAEERERIKAEQDKKIADERA 293

Query: 561 SFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPLKRGLVAAY 620
             +       +ER    A +      E+K A  ERQ++  E  R  +E   +K       
Sbjct: 294 RIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKE------ 347

Query: 621 SGDSDNEEELVERLESEEEKLADWKKMACLLCRRQFPNK---DALVRHQQLSDLHKQNMD 677
             +     E  +R++ EE++ A+ ++ A    R +   K   +   R++QL +      +
Sbjct: 348 --EEKRAAEERQRIKEEEKRAAEERQRA----RAEEEEKAKVEEQKRNKQLEEKKHAMQE 401

Query: 678 IYRRSRLSEQELEALELRERE 698
              +    EQ++E   + E++
Sbjct: 402 TKIKGEKVEQKIEGKWVNEKK 422



 Score = 34.3 bits (77), Expect = 0.48
 Identities = 41/212 (19%), Positives = 98/212 (46%), Gaps = 25/212 (11%)

Query: 501 EKETYVPAAESSSHQQSGLPPAKEGKEKKEKPK--SKTAQQIAKDMERWAKSLNKQKENF 558
           ++   + A E ++ Q+     A+E +  +E+ K  ++  Q+I ++ +R A+   + KE  
Sbjct: 290 DERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEE 349

Query: 559 KNSFQPVNSLREEERRESAAADAGFALFEKKGALAER---QQLIPELVRNGDEENPLKRG 615
           K + +    ++EEE+R +       A  E+K  + E+   +QL  E  ++  +E  +K  
Sbjct: 350 KRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQKRNKQL--EEKKHAMQETKIK-- 405

Query: 616 LVAAYSGDSDNEEELVERLESE--EEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHK 673
                       E++ +++E +   EK A   K+   + ++Q   K   V  Q   +  +
Sbjct: 406 -----------GEKVEQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKV--QAKREKLQ 452

Query: 674 QNMDIYRRSRLSEQELEA-LELREREMKYRDR 704
           ++   +++  + +++++   E +E    + DR
Sbjct: 453 EDKPTFKKEEIKDEKIKKDKEPKEEVKSFMDR 484


>gi|116734696 RNA binding motif protein 23 isoform 1 [Homo sapiens]
          Length = 439

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 87/397 (21%), Positives = 144/397 (36%), Gaps = 86/397 (21%)

Query: 11  ERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRD------YDSPERER 64
           E S +  S      RD + SRSR RD   +R+S  R   R   +R       + S  R R
Sbjct: 57  ETSKKKRSRSHNKSRDRKRSRSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSR 116

Query: 65  ERRNSDRSEDGYHSDGDYGEHDYRHDIS------------------DERESKTIMLRGLP 106
           + R  DR    Y S      + Y H  S                  +ER+++T+    L 
Sbjct: 117 DHRREDRVH--YRSPPLATGYRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLA 174

Query: 107 ITITESDIREMMESFEGPQPADVRLMK-RKTGVSRGFAFVEFYHLQDATSWMEANQKKLV 165
             I   D+ +   +    +  DVR++  R +  S+G A+VEF  +Q     +    ++L+
Sbjct: 175 ARIRPRDLEDFFSAV--GKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLL 232

Query: 166 IQGKHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQS 225
             G  I +  S                   + RL        K +            V S
Sbjct: 233 --GVPIIVQASQAE----------------KNRLAAMANNLQKGNGGP-----MRLYVGS 269

Query: 226 VDYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAM 285
           + +     +LR I              P+    ++NI L+KD  T +++G+ F+  S + 
Sbjct: 270 LHFNITEDMLRGI------------FEPFGK--IDNIVLMKDSDTGRSKGYGFITFSDSE 315

Query: 286 DASQLLQILQSL----------HPPLKIDGKTIGVDFAKSARKDLVLSDGNRV------- 328
            A + L+ L             H   ++DG T  + F    ++  + S G R        
Sbjct: 316 CARRALEQLNGFELAGRPMRVGHVTERLDGGT-DITFPDGDQELDLGSAGGRFQLMAKLA 374

Query: 329 --SAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQP 363
             +   + STA AAA  ++  +     G+V    L P
Sbjct: 375 EGAGIQLPSTAAAAAAAAAQAAALQLNGAVPLGALNP 411


>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
           sapiens]
          Length = 600

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 46/164 (28%), Positives = 57/164 (34%), Gaps = 20/164 (12%)

Query: 347 QSQSGEGGSVDYSYLQP------GQDGYA-QYAQYSQDYQ-----QFYQQQAGGLESDAS 394
           QS    G   D SY Q       GQ  YA  Y Q    Y      Q Y Q   G  + A 
Sbjct: 39  QSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAY 98

Query: 395 SASGTAVTTTSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKY 454
             +   VTTT A+  +QS           G       P++ +STQ  +   +       Y
Sbjct: 99  DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTSYSSTQPTSYDQSSYSQQNTY 158

Query: 455 AVPDTSTYQ--YDESSGY------YYDPTTGLYYDPNSQYYYNS 490
             P +   Q  Y + S Y       Y P TG Y    SQY   S
Sbjct: 159 GQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQS 202


>gi|47933339 RNA binding motif protein 15 [Homo sapiens]
          Length = 977

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 55  RDYDSPERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDI 114
           RDY   ER R   + +           + E D      D+R ++T+ L  L IT+TESD+
Sbjct: 331 RDYPFYERVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTESDL 390

Query: 115 REMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMH 174
           R   + F      D++   R  G +  + F++F +L  +     A   K++I+   I + 
Sbjct: 391 RRAFDRFGVITEVDIKRPSR--GQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNP-IKIG 447

Query: 175 YSNPRPKFEDWL 186
           Y    P    W+
Sbjct: 448 YGKATPTTRLWV 459


>gi|56090527 RNA binding motif protein, Y-linked, family 1, member E
           [Homo sapiens]
          Length = 496

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 29/187 (15%)

Query: 259 VNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQIL--QSLHPPLKIDGKTIGVDFAKSA 316
           ++ + LIKD+ T ++RGFAF+   +  DA    + +  +SLH      GK I V+    A
Sbjct: 34  ISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLH------GKAIKVE---QA 83

Query: 317 RKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQ 376
           +K    S G R    S  + + + +  S+  S+ G  G +      P Q+G+     Y+ 
Sbjct: 84  KKPSFQSGGRRRPPASSRNRSPSGSLRSARGSRGGTRGWL------PSQEGHLDDGGYTP 137

Query: 377 DYQQFYQQQAGGLESDASSASG---------TAVTTTSAAVVSQSPQLYNQTSNPPGSPT 427
           D +  Y +    ++   SS SG         +AV  +++ + SQ P   +Q     G P 
Sbjct: 138 DLKMSYSRGLIPVKRGPSSRSGGPPPKKSAPSAVARSNSWMGSQGPM--SQRRENYGVPP 195

Query: 428 EEAQPST 434
             A  S+
Sbjct: 196 RRATISS 202



 Score = 34.3 bits (77), Expect = 0.48
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 22  RDDRDERESRSRRRDSDYKRSSDDRRGDRYDDY---RDYDSPERERERRNSDRSEDGYHS 78
           RD+   R  R+RR   + +  +   RG  Y DY   R ++S  R      S R    Y  
Sbjct: 285 RDESYSRGYRNRRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDYAP 344

Query: 79  DG-DYGEHDYRHDISDERESK 98
              DY   DY H   DE  S+
Sbjct: 345 PHRDYAYRDYGHSSWDEHSSR 365



 Score = 32.7 bits (73), Expect = 1.4
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 24  DRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERE-------RERRNSDRSEDGY 76
           +RDE  SR  R     + + D     R   YRDY    R+       R RR+S  + +  
Sbjct: 247 NRDEHSSRGYRNHRSSRETRDYAPPSRGHAYRDYGHSRRDESYSRGYRNRRSSRETREYA 306

Query: 77  HSDGDYGEHDYRHDISDERESK 98
                +G  DY H    E  S+
Sbjct: 307 PPSRGHGYRDYGHSRRHESYSR 328



 Score = 32.0 bits (71), Expect = 2.4
 Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 10/89 (11%)

Query: 8   SRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYD----------DYRDY 57
           SR + S   G    R  R+ RE     R   Y+     RR + Y           + RDY
Sbjct: 283 SRRDESYSRGYRNRRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDY 342

Query: 58  DSPERERERRNSDRSEDGYHSDGDYGEHD 86
             P R+   R+   S    HS   Y  HD
Sbjct: 343 APPHRDYAYRDYGHSSWDEHSSRGYSYHD 371



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 127 ADVRLMKRKTGVSRGFAFVEFYHLQDA-TSWMEANQKKLVIQGKHIAMHYSNPRPKFE 183
           ++V L+K +T  SRGFAF+ F +  DA  +  + N K L   GK I +  +  +P F+
Sbjct: 35  SEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSL--HGKAIKVEQAK-KPSFQ 89


>gi|54633344 RNA binding motif protein, Y-linked, family 1, member B
           [Homo sapiens]
          Length = 496

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 29/187 (15%)

Query: 259 VNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQIL--QSLHPPLKIDGKTIGVDFAKSA 316
           ++ + LIKD+ T ++RGFAF+   +  DA    + +  +SLH      GK I V+    A
Sbjct: 34  ISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLH------GKAIKVE---QA 83

Query: 317 RKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQ 376
           +K    S G R    S  + + + +  S+  S+ G  G +      P Q+G+     Y+ 
Sbjct: 84  KKPSFQSGGRRRPPASSRNRSPSGSLRSARGSRGGTRGWL------PSQEGHLDDGGYTP 137

Query: 377 DYQQFYQQQAGGLESDASSASG---------TAVTTTSAAVVSQSPQLYNQTSNPPGSPT 427
           D +  Y +    ++   SS SG         +AV  +++ + SQ P   +Q     G P 
Sbjct: 138 DLKMSYSRGLIPVKRGPSSRSGGPPPKKSAPSAVARSNSWMGSQGPM--SQRRENYGVPP 195

Query: 428 EEAQPST 434
             A  S+
Sbjct: 196 RRATISS 202



 Score = 34.3 bits (77), Expect = 0.48
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 22  RDDRDERESRSRRRDSDYKRSSDDRRGDRYDDY---RDYDSPERERERRNSDRSEDGYHS 78
           RD+   R  R+RR   + +  +   RG  Y DY   R ++S  R      S R    Y  
Sbjct: 285 RDESYSRGYRNRRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDYAP 344

Query: 79  DG-DYGEHDYRHDISDERESK 98
              DY   DY H   DE  S+
Sbjct: 345 PHRDYAYRDYGHSSWDEHSSR 365



 Score = 32.7 bits (73), Expect = 1.4
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 24  DRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERE-------RERRNSDRSEDGY 76
           +RDE  SR  R     + + D     R   YRDY    R+       R RR+S  + +  
Sbjct: 247 NRDEHSSRGYRNHRSSRETRDYAPPSRGHAYRDYGHSRRDESYSRGYRNRRSSRETREYA 306

Query: 77  HSDGDYGEHDYRHDISDERESK 98
                +G  DY H    E  S+
Sbjct: 307 PPSRGHGYRDYGHSRRHESYSR 328



 Score = 32.0 bits (71), Expect = 2.4
 Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 10/89 (11%)

Query: 8   SRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYD----------DYRDY 57
           SR + S   G    R  R+ RE     R   Y+     RR + Y           + RDY
Sbjct: 283 SRRDESYSRGYRNRRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDY 342

Query: 58  DSPERERERRNSDRSEDGYHSDGDYGEHD 86
             P R+   R+   S    HS   Y  HD
Sbjct: 343 APPHRDYAYRDYGHSSWDEHSSRGYSYHD 371



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 127 ADVRLMKRKTGVSRGFAFVEFYHLQDA-TSWMEANQKKLVIQGKHIAMHYSNPRPKFE 183
           ++V L+K +T  SRGFAF+ F +  DA  +  + N K L   GK I +  +  +P F+
Sbjct: 35  SEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSL--HGKAIKVEQAK-KPSFQ 89


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.128    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,681,050
Number of Sequences: 37866
Number of extensions: 1627392
Number of successful extensions: 13424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 593
Number of HSP's that attempted gapping in prelim test: 9995
Number of HSP's gapped (non-prelim): 3217
length of query: 815
length of database: 18,247,518
effective HSP length: 111
effective length of query: 704
effective length of database: 14,044,392
effective search space: 9887251968
effective search space used: 9887251968
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.