Guide to the Human Genome
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Name: NIT1 Sequence: fasta or formatted (327aa) NCBI GI: 5031947
Description:

nitrilase 1

Referenced in:

Additional Enzymes and Related Sequences
Pyrimidine Biosynthesis and Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         31           3
 C cysteine            4.6         15           1
 D aspartate           2.8          9           1
 E glutamate           6.1         20           2
 F phenylalanine       3.1         10           1
 G glycine             7.6         25           2
 H histidine           3.7         12           2
 I isoleucine          3.4         11           1
 K lysine              2.4          8           1
 L leucine            12.8         42           2
 M methionine          1.8          6           1
 N asparagine          1.8          6           1
 P proline             7.6         25           2
 Q glutamine           4.6         15           2
 R arginine            7.0         23           2
 S serine              6.7         22           4
 T threonine           4.6         15           1
 V valine              5.8         19           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nitrilase 1 
NIT2                  0.245   nitrilase family, member 2 
UPB1                  0.058   beta-ureidopropionase 
DIDO1                 0.021   death inducer-obliterator 1 isoform c 
VNN2                  0.014   vanin 2 isoform 2 
VNN2                  0.014   vanin 2 isoform 1 precursor 
VNN1                  0.012   vanin 1 precursor 
VNN3                  0.012   vanin 3 isoform 1 precursor 
LOC731551             0.011   PREDICTED: similar to ectonucleotide pyrophosphatas...
LOC650354             0.011   PREDICTED: similar to ectonucleotide pyrophosphatas...
ARHGEF17              0.008   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
HDAC10                0.006   histone deacetylase 10 isoform 2 
HDAC10                0.006   histone deacetylase 10 isoform 1 
LRP4                  0.006   low density lipoprotein receptor-related protein 4 ...
LOC390937             0.005   PREDICTED: similar to hCG2040171 
LOC390937             0.005   PREDICTED: similar to hCG2040171 
LOC390937             0.005   PREDICTED: similar to hCG2040171 
ILDR1                 0.005   immunoglobulin-like domain containing receptor 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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