Guide to the Human Genome
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Name: IDH3A Sequence: fasta or formatted (366aa) NCBI GI: 5031777
Description:

isocitrate dehydrogenase 3 (NAD+) alpha precursor

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         34           2
 C cysteine            2.2          8           1
 D aspartate           5.7         21           1
 E glutamate           5.5         20           2
 F phenylalanine       3.6         13           1
 G glycine             9.3         34           2
 H histidine           2.2          8           1
 I isoleucine          7.4         27           1
 K lysine              6.6         24           1
 L leucine             7.7         28           3
 M methionine          4.1         15           2
 N asparagine          4.9         18           2
 P proline             4.6         17           1
 Q glutamine           2.2          8           1
 R arginine            4.1         15           2
 S serine              5.5         20           1
 T threonine           5.5         20           1
 V valine              7.1         26           2
 W tryptophan          0.8          3           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   isocitrate dehydrogenase 3 (NAD+) alpha precursor [Ho... 
IDH3B                 0.365   isocitrate dehydrogenase 3, beta subunit isoform b p...
IDH3B                 0.355   isocitrate dehydrogenase 3, beta subunit isoform a p...
IDH3G                 0.353   isocitrate dehydrogenase 3 (NAD+) gamma isoform a pre...
IDH3G                 0.333   isocitrate dehydrogenase 3 (NAD+) gamma isoform b pr...
IDH3B                 0.230   isocitrate dehydrogenase 3, beta subunit isoform c [...
IDH2                  0.022   isocitrate dehydrogenase 2 (NADP+), mitochondrial pr...
TTN                   0.008   titin isoform N2-A 
TTN                   0.008   titin isoform novex-2 
TTN                   0.008   titin isoform novex-1 
TTN                   0.008   titin isoform N2-B 
APEX2                 0.007   apurinic/apyrimidinic endonuclease 2 
CNGB1                 0.007   cyclic nucleotide gated channel beta 1 isoform a [H...
NPHS1                 0.007   nephrin precursor 
FBXO43                0.004   F-box protein 43 isoform a 
FBXO43                0.004   F-box protein 43 isoform b 
NAV1                  0.004   neuron navigator 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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