Guide to the Human Genome
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Name: IDH3G Sequence: fasta or formatted (380aa) NCBI GI: 28178838
Description:

isocitrate dehydrogenase 3 (NAD+) gamma isoform b precursor

Referenced in:

TCA Cycle

Other entries for this name:
alt prot [393aa] isocitrate dehydrogenase 3 (NAD+) gamma isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         36           2
 C cysteine            2.1          8           2
 D aspartate           3.2         12           1
 E glutamate           5.5         21           2
 F phenylalanine       2.4          9           1
 G glycine             6.1         23           2
 H histidine           3.9         15           1
 I isoleucine          6.1         23           2
 K lysine              5.3         20           2
 L leucine             9.2         35           2
 M methionine          3.2         12           2
 N asparagine          6.6         25           2
 P proline             5.5         21           2
 Q glutamine           1.8          7           2
 R arginine            5.5         21           2
 S serine              6.8         26           2
 T threonine           5.3         20           2
 V valine              9.5         36           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   isocitrate dehydrogenase 3 (NAD+) gamma isoform b pr... 
IDH3G                 0.945   isocitrate dehydrogenase 3 (NAD+) gamma isoform a pre...
IDH3B                 0.427   isocitrate dehydrogenase 3, beta subunit isoform a p...
IDH3B                 0.427   isocitrate dehydrogenase 3, beta subunit isoform b p...
IDH3A                 0.323   isocitrate dehydrogenase 3 (NAD+) alpha precursor [Ho...
IDH3B                 0.254   isocitrate dehydrogenase 3, beta subunit isoform c [...
ROCK2                 0.007   Rho-associated, coiled-coil containing protein kinas...
DNAI1                 0.005   dynein, axonemal, intermediate chain 1 
PLCD1                 0.005   phospholipase C, delta 1 isoform 2 
PLCD1                 0.005   phospholipase C, delta 1 isoform 1 
LOC100134103          0.005   PREDICTED: similar to Na+/H+ exchanger domain conta...
NHEDC1                0.005   Na+/H+ exchanger domain containing 1 isoform 2 [Hom...
NHEDC1                0.005   Na+/H+ exchanger domain containing 1 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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