Guide to the Human Genome
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Name: IDH2 Sequence: fasta or formatted (452aa) NCBI GI: 28178832
Description:

isocitrate dehydrogenase 2 (NADP+), mitochondrial precursor

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         34           2
 C cysteine            1.8          8           1
 D aspartate           7.1         32           2
 E glutamate           4.6         21           2
 F phenylalanine       4.4         20           1
 G glycine             7.7         35           2
 H histidine           2.9         13           1
 I isoleucine          6.4         29           2
 K lysine              8.0         36           2
 L leucine             6.9         31           1
 M methionine          2.7         12           1
 N asparagine          3.3         15           1
 P proline             4.2         19           1
 Q glutamine           4.0         18           1
 R arginine            5.5         25           2
 S serine              4.9         22           2
 T threonine           6.9         31           2
 V valine              6.2         28           2
 W tryptophan          2.0          9           1
 Y tyrosine            3.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   isocitrate dehydrogenase 2 (NADP+), mitochondrial pr... 
IDH1                  0.616   isocitrate dehydrogenase 1 (NADP+), soluble 
IDH3A                 0.018   isocitrate dehydrogenase 3 (NAD+) alpha precursor [Ho...
PRC1                  0.009   protein regulator of cytokinesis 1 isoform 3 
PRC1                  0.009   protein regulator of cytokinesis 1 isoform 2 
PRC1                  0.009   protein regulator of cytokinesis 1 isoform 1 
KIAA1267              0.006   hypothetical protein LOC284058 
TTC9B                 0.006   tetratricopeptide repeat domain 9B 
UNC93B1               0.006   unc-93 homolog B1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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