BRIP1 3659

Name: BRIP1	Sequence: fasta or formatted (1249aa)		NCBI GI: 14042978
Description: BRCA1 interacting protein C-terminal helicase 1		Referenced in: DEAD / H Helicase Family DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 66 2 C cysteine 2.8 35 3 D aspartate 5.3 66 2 E glutamate 7.8 98 2 F phenylalanine 3.6 45 1 G glycine 4.9 61 2 H histidine 2.5 31 2 I isoleucine 6.2 77 2 K lysine 8.2 102 2 L leucine 9.0 113 3 M methionine 1.4 17 2 N asparagine 5.4 68 3 P proline 4.2 53 2 Q glutamine 4.5 56 2 R arginine 4.3 54 2 S serine 9.5 119 2 T threonine 6.2 77 2 V valine 5.0 62 2 W tryptophan 1.2 15 1 Y tyrosine 2.7 34 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 BRCA1 interacting protein C-terminal helicase 1 [Hom... DDX12 0.098 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho... DDX11 0.098 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.082 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... RTEL1 0.077 regulator of telomere elongation helicase 1 isoform ... RTEL1 0.077 regulator of telomere elongation helicase 1 isoform 1... DDX11 0.074 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... ERCC2 0.058 excision repair cross-complementing rodent repair de... LOC100291587 0.044 PREDICTED: similar to Putative ATP-dependent RNA he... ERCC2 0.018 excision repair cross-complementing rodent repair d... SYTL2 0.005 synaptotagmin-like 2 isoform i SYTL2 0.004 synaptotagmin-like 2 isoform a SYTL2 0.004 synaptotagmin-like 2 isoform g PCDH15 0.004 protocadherin 15 isoform CD2-1 precursor HUWE1 0.004 HECT, UBA and WWE domain containing 1 ZBTB20 0.004 zinc finger and BTB domain containing 20 ARHGAP21 0.004 Rho GTPase activating protein 21 MORC4 0.004 zinc finger, CW type with coiled-coil domain 2 isof... PELP1 0.004 proline, glutamic acid and leucine rich protein 1 [... MIA3 0.004 melanoma inhibitory activity family, member 3 [Homo... MUC17 0.004 mucin 17 CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.003 calcium channel, voltage-dependent, L type, alpha 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.