Search of human proteins with 4885365

Search of human proteins with 4885365

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4885365 general transcription factor IIH, polypeptide 1,
62kDa [Homo sapiens]
         (548 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|214831601 general transcription factor IIH, polypeptide 1, 62...  1086   0.0  
gi|4885365 general transcription factor IIH, polypeptide 1, 62kD...  1086   0.0  
gi|16554564 caspase recruitment domain family, member 6 [Homo sa...    37   0.047
gi|153945816 Nanog homeobox [Homo sapiens]                             36   0.10 
gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Hom...    36   0.10 
gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Hom...    36   0.10 
gi|30795193 septin 10 isoform 2 [Homo sapiens]                         34   0.30 
gi|21945064 septin 10 isoform 1 [Homo sapiens]                         34   0.30 
gi|4506049 hematopoietically expressed homeobox [Homo sapiens]         34   0.40 
gi|55749758 DIP2 disco-interacting protein 2 homolog B [Homo sap...    34   0.40 
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    32   2.0  
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    32   2.0  
gi|33624873 spectrin repeat containing, nuclear envelope 2 isofo...    32   2.0  
gi|33624861 spectrin repeat containing, nuclear envelope 2 isofo...    32   2.0  
gi|215490049 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490047 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490045 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490043 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490041 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490039 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490037 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490035 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490033 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490031 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490029 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490027 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490025 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490023 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|215490021 mortality factor 4 like 2 [Homo sapiens]                  32   2.0  
gi|6912448 mortality factor 4 like 2 [Homo sapiens]                    32   2.0  

>gi|214831601 general transcription factor IIH, polypeptide 1, 62kDa
           [Homo sapiens]
          Length = 548

 Score = 1086 bits (2809), Expect = 0.0
 Identities = 548/548 (100%), Positives = 548/548 (100%)

Query: 1   MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60
           MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
Sbjct: 1   MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60

Query: 61  AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120
           AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
Sbjct: 61  AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120

Query: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180
           DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG
Sbjct: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180

Query: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240
           CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
Sbjct: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240

Query: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300
           DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN
Sbjct: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300

Query: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360
           AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY
Sbjct: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360

Query: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420
           EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
Sbjct: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420

Query: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480
           VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
Sbjct: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480

Query: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540
           VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
Sbjct: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540

Query: 541 SRRLMKKT 548
           SRRLMKKT
Sbjct: 541 SRRLMKKT 548


>gi|4885365 general transcription factor IIH, polypeptide 1, 62kDa
           [Homo sapiens]
          Length = 548

 Score = 1086 bits (2809), Expect = 0.0
 Identities = 548/548 (100%), Positives = 548/548 (100%)

Query: 1   MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60
           MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
Sbjct: 1   MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60

Query: 61  AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120
           AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
Sbjct: 61  AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120

Query: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180
           DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG
Sbjct: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180

Query: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240
           CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
Sbjct: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240

Query: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300
           DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN
Sbjct: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300

Query: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360
           AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY
Sbjct: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360

Query: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420
           EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
Sbjct: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420

Query: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480
           VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
Sbjct: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480

Query: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540
           VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
Sbjct: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540

Query: 541 SRRLMKKT 548
           SRRLMKKT
Sbjct: 541 SRRLMKKT 548


>gi|16554564 caspase recruitment domain family, member 6 [Homo
           sapiens]
          Length = 1037

 Score = 37.0 bits (84), Expect = 0.047
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 15/94 (15%)

Query: 318 GLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQE------SIEYEDL-------G 364
           GLR +  ++E T  P +M  +S   D F P +K+ +  E        E+ DL        
Sbjct: 91  GLRHEVLKHENTVPPQSMGASSNSEDAFSPGIKQPEAPEITVFFSEKEHLDLETSEFFRD 150

Query: 365 KNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQ 398
           K  S +  AL+ +K+++ Y   TP  +L Y+  +
Sbjct: 151 KKTSYRETALSARKNEKEY--DTPEVTLSYSVEK 182


>gi|153945816 Nanog homeobox [Homo sapiens]
          Length = 305

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 487 EEKV-VKMKSNLERFQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTWQSRRL 544
           E+KV VK +     F  T+LC   ++ +RQ YLS   +  +  +L  +Y ++ TW   + 
Sbjct: 88  EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 147

Query: 545 MK 546
           MK
Sbjct: 148 MK 149


>gi|239755734 PREDICTED: similar to Nanog homeobox isoform 2 [Homo
           sapiens]
          Length = 289

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 487 EEKV-VKMKSNLERFQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTWQSRRL 544
           E+KV VK +     F  T+LC   ++ +RQ YLS   +  +  +L  +Y ++ TW   + 
Sbjct: 88  EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 147

Query: 545 MK 546
           MK
Sbjct: 148 MK 149


>gi|239755732 PREDICTED: similar to Nanog homeobox isoform 1 [Homo
           sapiens]
          Length = 305

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 487 EEKV-VKMKSNLERFQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTWQSRRL 544
           E+KV VK +     F  T+LC   ++ +RQ YLS   +  +  +L  +Y ++ TW   + 
Sbjct: 88  EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 147

Query: 545 MK 546
           MK
Sbjct: 148 MK 149


>gi|30795193 septin 10 isoform 2 [Homo sapiens]
          Length = 431

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 86  VKERDAV-KDLLQQLLPKFK------RKANKELEEKNRMLQEDPVLFQLYKDLVVSQVIS 138
           VKE++A+ K+  ++L  KF+      ++   +LEEK R+L+E+ + F   K    S++  
Sbjct: 351 VKEKEAILKEAERELQAKFEHLKRLHQEERMKLEEKRRLLEEEIIAFS--KKKATSEIFH 408

Query: 139 AEEFWANRLNVNATDSSSTSN 159
           ++ F A   N+        SN
Sbjct: 409 SQSFLATGSNLRKDKDRKNSN 429


>gi|21945064 septin 10 isoform 1 [Homo sapiens]
          Length = 454

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 86  VKERDAV-KDLLQQLLPKFK------RKANKELEEKNRMLQEDPVLFQLYKDLVVSQVIS 138
           VKE++A+ K+  ++L  KF+      ++   +LEEK R+L+E+ + F   K    S++  
Sbjct: 374 VKEKEAILKEAERELQAKFEHLKRLHQEERMKLEEKRRLLEEEIIAFS--KKKATSEIFH 431

Query: 139 AEEFWANRLNVNATDSSSTSN 159
           ++ F A   N+        SN
Sbjct: 432 SQSFLATGSNLRKDKDRKNSN 452


>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
          Length = 270

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 25/164 (15%)

Query: 386 PTPIQSLQYATSQDIINSFQSI----RQEMEAYTPKLTQVLSSSAASSTITALSPGGALM 441
           PTP  +L    S     SF S+    R  +   TP +    S  +A++   A  PGG   
Sbjct: 45  PTPAPTLPSPNS-----SFTSLVSPYRTPVYEPTP-IHPAFSHHSAAALAAAYGPGGF-- 96

Query: 442 QGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQ 501
            GG      + V +   + L+H    +G+ L   WS      PFL+  + K K    RF 
Sbjct: 97  -GGPLYPFPRTVNDYTHALLRH--DPLGKPL--LWS------PFLQRPLHKRKGGQVRFS 145

Query: 502 VTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTW-QSRR 543
             +    ++K   Q YLS      + +MLQ +  ++ TW Q+RR
Sbjct: 146 NDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRR 189


>gi|55749758 DIP2 disco-interacting protein 2 homolog B [Homo
           sapiens]
          Length = 1576

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 8/137 (5%)

Query: 297 ENSNAAIIKRFNHHSAMVLAAGLRKQEAQN--EQTSEPSNMDGNSGDADCFQPAVKRAKL 354
           E   AA+ K      A+ +    R    Q+  +  + P     +  +    + A   A L
Sbjct: 105 EAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAAL 164

Query: 355 QESIEYEDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAY 414
           Q+S++  +   N S++  + +   S    HG          TS  + + F + R E  + 
Sbjct: 165 QQSLQNAESWINRSIQGSSTSSSASSTLSHGEVK------GTSGSLADVFANTRIENFSA 218

Query: 415 TPKLTQVLSSSAASSTI 431
            P +T   SSS++SS+I
Sbjct: 219 PPDVTTTTSSSSSSSSI 235


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 50   IKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANK 109
            I+ Q++  + K K  LQ +       N   S  +T +K+ +A  ++L+   P       +
Sbjct: 6561 IQAQELHNKLKIKQNLQQL-------NSDISAITTWLKKTEAELEMLKMAKPP---SDIQ 6610

Query: 110  ELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEF 142
            E+E + + LQE    F  YK LVVS  +S++EF
Sbjct: 6611 EIELRVKRLQEILKAFDTYKALVVSVNVSSKEF 6643


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 50   IKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANK 109
            I+ Q++  + K K  LQ +       N   S  +T +K+ +A  ++L+   P       +
Sbjct: 6538 IQAQELHNKLKIKQNLQQL-------NSDISAITTWLKKTEAELEMLKMAKPP---SDIQ 6587

Query: 110  ELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEF 142
            E+E + + LQE    F  YK LVVS  +S++EF
Sbjct: 6588 EIELRVKRLQEILKAFDTYKALVVSVNVSSKEF 6620


>gi|33624873 spectrin repeat containing, nuclear envelope 2 isoform
           4 [Homo sapiens]
          Length = 556

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 50  IKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANK 109
           I+ Q++  + K K  LQ +       N   S  +T +K+ +A  ++L+   P       +
Sbjct: 195 IQAQELHNKLKIKQNLQQL-------NSDISAITTWLKKTEAELEMLKMAKPP---SDIQ 244

Query: 110 ELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEF 142
           E+E + + LQE    F  YK LVVS  +S++EF
Sbjct: 245 EIELRVKRLQEILKAFDTYKALVVSVNVSSKEF 277


>gi|33624861 spectrin repeat containing, nuclear envelope 2 isoform
           2 [Homo sapiens]
          Length = 429

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 50  IKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANK 109
           I+ Q++  + K K  LQ +       N   S  +T +K+ +A  ++L+   P       +
Sbjct: 69  IQAQELHNKLKIKQNLQQL-------NSDISAITTWLKKTEAELEMLKMAKPP---SDIQ 118

Query: 110 ELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEF 142
           E+E + + LQE    F  YK LVVS  +S++EF
Sbjct: 119 EIELRVKRLQEILKAFDTYKALVVSVNVSSKEF 151


>gi|215490049 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490047 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490045 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490043 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490041 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490039 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490037 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490035 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490033 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490031 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490029 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490027 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490025 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490023 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|215490021 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


>gi|6912448 mortality factor 4 like 2 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 275 KPLDEGYGISSVPSASNSKSI----KENSNAAIIKRFNHHSAMVLAAGLRKQEAQNEQTS 330
           KP       S +  AS+ K      ++N   A+  R+   SA    +G  ++  +N+Q +
Sbjct: 23  KPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKT 82

Query: 331 EPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKN 366
            P N DG S       P  KRA+   ++E E+  KN
Sbjct: 83  -PGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKN 117


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,121,498
Number of Sequences: 37866
Number of extensions: 801875
Number of successful extensions: 2654
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 2643
Number of HSP's gapped (non-prelim): 53
length of query: 548
length of database: 18,247,518
effective HSP length: 107
effective length of query: 441
effective length of database: 14,195,856
effective search space: 6260372496
effective search space used: 6260372496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.