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Search of human proteins with 4826964
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4826964 UV excision repair protein RAD23 homolog A [Homo
sapiens]
(363 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4826964 UV excision repair protein RAD23 homolog A [Homo sapi... 712 0.0
gi|4506387 UV excision repair protein RAD23 homolog B [Homo sapi... 413 e-115
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 55 1e-07
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 50 3e-06
gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens] 49 9e-06
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 47 3e-05
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 47 3e-05
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 47 3e-05
gi|11024714 ubiquitin B precursor [Homo sapiens] 47 3e-05
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 47 3e-05
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom... 47 3e-05
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ... 47 3e-05
gi|67191208 ubiquitin C [Homo sapiens] 47 3e-05
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s... 47 3e-05
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ... 47 3e-05
gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 45 8e-05
gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 45 8e-05
gi|5453760 neural precursor cell expressed, developmentally down... 45 8e-05
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 43 5e-04
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 43 5e-04
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 42 9e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 42 9e-04
gi|154426306 kinesin family member 24 [Homo sapiens] 42 0.001
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 41 0.001
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 41 0.001
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 41 0.001
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 41 0.001
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens] 41 0.002
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens] 41 0.002
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens] 41 0.002
>gi|4826964 UV excision repair protein RAD23 homolog A [Homo
sapiens]
Length = 363
Score = 712 bits (1838), Expect = 0.0
Identities = 363/363 (100%), Positives = 363/363 (100%)
Query: 1 MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVP 60
MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVP
Sbjct: 1 MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVP 60
Query: 61 IRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARE 120
IRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARE
Sbjct: 61 IRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARE 120
Query: 121 DKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERV 180
DKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERV
Sbjct: 121 DKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERV 180
Query: 181 VAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQ 240
VAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQ
Sbjct: 181 VAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQ 240
Query: 241 FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE 300
FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE
Sbjct: 241 FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE 300
Query: 301 VGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNF 360
VGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNF
Sbjct: 301 VGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNF 360
Query: 361 DDE 363
DDE
Sbjct: 361 DDE 363
>gi|4506387 UV excision repair protein RAD23 homolog B [Homo
sapiens]
Length = 409
Score = 413 bits (1061), Expect = e-115
Identities = 239/410 (58%), Positives = 277/410 (67%), Gaps = 54/410 (13%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
+TLKTLQQQTFKI ++P+ETVK LKEKIE+EKG+DAFPVAGQKLIYAGKIL+DD +++Y
Sbjct: 3 VTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEY 62
Query: 65 RIDEKNFVVVMVTKTKA----------------------------GQGTSAPPEASPTAA 96
+IDEKNFVVVMVTK KA Q + P +PT+
Sbjct: 63 KIDEKNFVVVMVTKPKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTST 122
Query: 97 PESSTSFPPAPTSGMSHPPPA-AREDKSPSEESAPT---TSPESVSGSVPSSGSSGREED 152
P S T PA + S P PA A + + P+E+ A T TSP + + S S ED
Sbjct: 123 PASIT---PASATASSEPAPASAAKQEKPAEKPAETPVATSPTATDSTSGDSSRSNLFED 179
Query: 153 AASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPE--- 209
A S LVTG YE M+TEIMSMGYERE+V+AALRAS+NNP RAVEYLL GIPG E +
Sbjct: 180 ATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVV 239
Query: 210 -------HGSVQESQVSEQPATEAA-------GENPLEFLRDQPQFQNMRQVIQQNPALL 255
G+ Q S V+ AT A G +PLEFLR+QPQFQ MRQ+IQQNP+LL
Sbjct: 240 DPPQAASTGAPQSSAVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLL 299
Query: 256 PALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGEL-ADISDVEGEVGAIGEE-APQMNY 313
PALLQQ+G+ENPQLLQQIS+HQE FIQMLNEP E G G I E + MNY
Sbjct: 300 PALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNY 359
Query: 314 IQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE 363
IQVTPQEKEAIERLKALGFPE LVIQAYFACEKNENLAANFLL QNFD++
Sbjct: 360 IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED 409
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 54.7 bits (130), Expect = 1e-07
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 38/252 (15%)
Query: 48 LIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAP 107
LI+AGKIL D + + I + V +++ + Q +A +SP+ +S AP
Sbjct: 54 LIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTPDPAS-----AP 108
Query: 108 TSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETML 167
++ + P A+ S S S + SG PS G+ A +++++G
Sbjct: 109 STTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILSG------F 162
Query: 168 TEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAA 227
I+ +G +L N + + + +PE SQ+ E P +
Sbjct: 163 GGILGLG--------SLGLGSANFMELQQQMQRQLMSNPE------MLSQIMENPLVQDM 208
Query: 228 GENP---LEFLRDQPQFQNMRQVIQQNPALL-----PALLQQLGQ--ENPQLLQQISRHQ 277
NP + PQ M+Q++++NP + P L++Q + NP ++Q++ R+Q
Sbjct: 209 MSNPDLMRHMIMANPQ---MQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQ 265
Query: 278 EQFIQMLNEPPG 289
++ + L PG
Sbjct: 266 DRALSNLESIPG 277
Score = 39.7 bits (91), Expect = 0.004
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 75 MVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSP 134
++T +A Q + T E+ P + G+S P + + S APT+SP
Sbjct: 459 ILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAGSTPEAPTSSP 518
Query: 135 ESVSGSVPSSGSSGREE--DAASTLVTGS----------EYETMLTEIMSMGY-ERERVV 181
+ + S P+ SS +++ L+ GS ++ L ++ SMG+ RE +
Sbjct: 519 ATPATSSPTGASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANL 578
Query: 182 AALRASYNNPHRAVEYLL 199
AL A+ + + A+E LL
Sbjct: 579 QALIATGGDINAAIERLL 596
Score = 30.4 bits (67), Expect = 2.6
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 211 GSVQESQVSEQPATEAAGENP--LEFLRDQPQFQNMRQVIQQNPALLPALLQQ--LGQEN 266
GS + Q + ENP ++ + P ++M Q + QNP ++ L N
Sbjct: 374 GSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTLAQNPDFAAQMMVNVPLFAGN 433
Query: 267 PQLLQQISRHQEQFIQMLNEP 287
PQL +Q+ F+Q + P
Sbjct: 434 PQLQEQLRLQLPVFLQQMQNP 454
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 50.1 bits (118), Expect = 3e-06
Identities = 56/193 (29%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 73 VVMVTKTKAGQGTSAPPEAS--------PTAAPESSTSFPPAPTSGMS-HPPPAAREDKS 123
+ +V G TS PP A+ PTA SSTS PP P G+S PP A E+ S
Sbjct: 282 ISLVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGGLSTSVPPTATEELS 341
Query: 124 PSEESAPTTSP---------ESVSGSVPSSGSSGREE-------DAASTLVTGSEYETML 167
S P P E +S SVP + S G + + ASTLV + +
Sbjct: 342 TSVPPTPGEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLVQPTAPDGPG 401
Query: 168 TEIMSMGYERERVVAALRASYN-NPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEA 226
+ ++ E + + AS + NP + L P P V ++ V
Sbjct: 402 SSVLPNPGEGPSTLFSSSASVDRNPSKCSLVL-------PSPR---VTKASVDSDSEGPK 451
Query: 227 AGENPLEF--LRD 237
E P+EF LRD
Sbjct: 452 GAEGPIEFEVLRD 464
Score = 44.7 bits (104), Expect = 1e-04
Identities = 43/137 (31%), Positives = 57/137 (41%), Gaps = 15/137 (10%)
Query: 81 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS 140
A +G S +A+P P STS PP T G+S P P R D+ PS S P T E S S
Sbjct: 216 ATEGLSTSVQATPDEGP--STSVPPTATEGLSTPVPPTR-DEGPS-TSVPATPGEGPSTS 271
Query: 141 VPSSGSSGR-------EEDAASTLVTGSEYETMLTEIMSMGYERERV----VAALRASYN 189
V + S G+ +ST V + E + T + E S +
Sbjct: 272 VLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGGLSTS 331
Query: 190 NPHRAVEYLLTGIPGSP 206
P A E L T +P +P
Sbjct: 332 VPPTATEELSTSVPPTP 348
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 82 GQGTSAPPEAS--------PTAAPESSTSFPPAPTSGMS-HPPPAAREDKS----PSEES 128
G+ TS PP +S PTA+ STS PP P G S PP A E S P+ +
Sbjct: 135 GRNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDE 194
Query: 129 APTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEI 170
P+TS G P + + ST V + E T +
Sbjct: 195 GPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSV 236
Score = 33.5 bits (75), Expect = 0.31
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARED-----KSPSEESAPTTSPES 136
G GTS PT + STS PP + G+ A + + P+ P+TS
Sbjct: 99 GPGTSV----LPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPP 154
Query: 137 VSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIM 171
+ VPS+ + ST V + YE T ++
Sbjct: 155 TASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVV 189
>gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens]
Length = 409
Score = 48.5 bits (114), Expect = 9e-06
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPT----TSPESV 137
G + +PP+ SP A PE + P P G + P A KSPS+ S P T P +V
Sbjct: 262 GNKSPSPPDGSPAATPEIRVNHEPEPAGGAT---PGATLPKSPSQSSLPAVVVETFPATV 318
Query: 138 SGSVPSSGSSGR-EEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVE 196
+G+V +GR + ++++ T+ + + VV + + NP E
Sbjct: 319 NGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVI--PFQNPEEQDE 376
Query: 197 YLLTGIPGSPEPEHGSVQE 215
L G+ S +H +++
Sbjct: 377 GWLMGVKESDWNQHKELEK 395
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 47.0 bits (110), Expect = 3e-05
Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 54/270 (20%)
Query: 2 AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPI 61
++ + +KTL QT + VK KE I A + P Q+LIY G++L DD +
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASV---SIPSEKQRLIYQGRVLQDDKKL 72
Query: 62 RDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARED 121
++Y + K V+ +V + APP+ + S T A G S PP R
Sbjct: 73 QEYNVGGK--VIHLVER--------APPQTHLPSGASSGTGSASATHGGGS--PPGTRGP 120
Query: 122 KSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVV 181
+ + + + ++PS GS+ + + + R R+V
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSA-------------VDVHINMEQAPIQSEPRVRLV 167
Query: 182 AALRASYNNPHRAVEYLLTGIP--GSPEPEHGS-------------VQESQVSEQPATEA 226
A + R ++ LL+ + G P+P+H SQ SE +EA
Sbjct: 168 MA-----QHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEA 222
Query: 227 AGENPLEFLRDQPQFQNMRQVIQQNPALLP 256
P+E + + QNP L P
Sbjct: 223 PPREPMEAEEVE------ERAPAQNPELTP 246
Score = 39.3 bits (90), Expect = 0.006
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Query: 83 QGTSAPPEASPTAAPESSTSFPPAPTSGMSHP-----PPAAREDKSPSEESAPTTSPESV 137
+G P + P P + T P A +S S P PP + EE AP +PE
Sbjct: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
Query: 138 SGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYE--------RERVVAALRASYN 189
G P +G + E A + +EY +L E+ + E + AA YN
Sbjct: 246 PGPAP-AGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYN 304
Query: 190 NPHRAVE 196
N H E
Sbjct: 305 NNHEGRE 311
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 47.0 bits (110), Expect = 3e-05
Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 54/270 (20%)
Query: 2 AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPI 61
++ + +KTL QT + VK KE I A + P Q+LIY G++L DD +
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASV---SIPSEKQRLIYQGRVLQDDKKL 72
Query: 62 RDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARED 121
++Y + K V+ +V + APP+ + S T A G S PP R
Sbjct: 73 QEYNVGGK--VIHLVER--------APPQTHLPSGASSGTGSASATHGGGS--PPGTRGP 120
Query: 122 KSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVV 181
+ + + + ++PS GS+ + + + R R+V
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSA-------------VDVHINMEQAPIQSEPRVRLV 167
Query: 182 AALRASYNNPHRAVEYLLTGIP--GSPEPEHGS-------------VQESQVSEQPATEA 226
A + R ++ LL+ + G P+P+H SQ SE +EA
Sbjct: 168 MA-----QHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEA 222
Query: 227 AGENPLEFLRDQPQFQNMRQVIQQNPALLP 256
P+E + + QNP L P
Sbjct: 223 PPREPMEAEEVE------ERAPAQNPELTP 246
Score = 39.3 bits (90), Expect = 0.006
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Query: 83 QGTSAPPEASPTAAPESSTSFPPAPTSGMSHP-----PPAAREDKSPSEESAPTTSPESV 137
+G P + P P + T P A +S S P PP + EE AP +PE
Sbjct: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
Query: 138 SGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYE--------RERVVAALRASYN 189
G P +G + E A + +EY +L E+ + E + AA YN
Sbjct: 246 PGPAP-AGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYN 304
Query: 190 NPHRAVE 196
N H E
Sbjct: 305 NNHEGRE 311
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 47.0 bits (110), Expect = 3e-05
Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 54/270 (20%)
Query: 2 AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPI 61
++ + +KTL QT + VK KE I A + P Q+LIY G++L DD +
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASV---SIPSEKQRLIYQGRVLQDDKKL 72
Query: 62 RDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARED 121
++Y + K V+ +V + APP+ + S T A G S PP R
Sbjct: 73 QEYNVGGK--VIHLVER--------APPQTHLPSGASSGTGSASATHGGGS--PPGTRGP 120
Query: 122 KSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVV 181
+ + + + ++PS GS+ + + + R R+V
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSA-------------VDVHINMEQAPIQSEPRVRLV 167
Query: 182 AALRASYNNPHRAVEYLLTGIP--GSPEPEHGS-------------VQESQVSEQPATEA 226
A + R ++ LL+ + G P+P+H SQ SE +EA
Sbjct: 168 MA-----QHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEA 222
Query: 227 AGENPLEFLRDQPQFQNMRQVIQQNPALLP 256
P+E + + QNP L P
Sbjct: 223 PPREPMEAEEVE------ERAPAQNPELTP 246
Score = 39.3 bits (90), Expect = 0.006
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Query: 83 QGTSAPPEASPTAAPESSTSFPPAPTSGMSHP-----PPAAREDKSPSEESAPTTSPESV 137
+G P + P P + T P A +S S P PP + EE AP +PE
Sbjct: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
Query: 138 SGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYE--------RERVVAALRASYN 189
G P +G + E A + +EY +L E+ + E + AA YN
Sbjct: 246 PGPAP-AGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYN 304
Query: 190 NPHRAVE 196
N H E
Sbjct: 305 NNHEGRE 311
>gi|11024714 ubiquitin B precursor [Homo sapiens]
Length = 229
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 60 NI-QKESTLHLVLRLRGG 76
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 136 NI-QKESTLHLVLRLRGG 152
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 212 NI-QKESTLHLVLRLRGG 228
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 46.6 bits (109), Expect = 3e-05
Identities = 62/268 (23%), Positives = 100/268 (37%), Gaps = 44/268 (16%)
Query: 2 AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPI 61
++ + +KTL QT + VK KE I A + P Q+LIY G++L DD +
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASV---SIPSEKQRLIYQGRVLQDDKKL 72
Query: 62 RDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARED 121
++Y + K V+ +V + APP+ + S T A G S PP R
Sbjct: 73 QEYNVGGK--VIHLVER--------APPQTHLPSGASSGTGSASATHGGGS--PPGTRGP 120
Query: 122 KSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVV 181
+ + + + ++PS GS+ SE L M + + ++
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
Query: 182 AALRASYNNPHRAVEYLLTGIPGSPEPEHGS-------------VQESQVSEQPATEAAG 228
+ + + YL G P+P+H SQ SE +EA
Sbjct: 181 SRM--------ETLPYL--QCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPP 230
Query: 229 ENPLEFLRDQPQFQNMRQVIQQNPALLP 256
P+E + + QNP L P
Sbjct: 231 REPMEAEEVE------ERAPAQNPELTP 252
Score = 39.3 bits (90), Expect = 0.006
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Query: 83 QGTSAPPEASPTAAPESSTSFPPAPTSGMSHP-----PPAAREDKSPSEESAPTTSPESV 137
+G P + P P + T P A +S S P PP + EE AP +PE
Sbjct: 192 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 251
Query: 138 SGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYE--------RERVVAALRASYN 189
G P +G + E A + +EY +L E+ + E + AA YN
Sbjct: 252 PGPAP-AGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYN 310
Query: 190 NPHRAVE 196
N H E
Sbjct: 311 NNHEGRE 317
>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 60 NI-QKESTLHLVLRLRGG 76
>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 60 NI-QKESTLHLVLRLRGG 76
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 60 NI-QKESTLHLVLRLRGG 76
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 136 NI-QKESTLHLVLRLRGG 152
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPSDQQRLIFAGKQLEDGRTLSDY 211
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 212 NI-QKESTLHLVLRLRGG 228
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 288 NI-QKESTLHLVLRLRGG 304
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 364 NI-QKESTLHLVLRLRGG 380
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 440 NI-QKESTLHLVLRLRGG 456
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 515
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 516 NI-QKESTLHLVLRLRGG 532
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 591
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 592 NI-QKESTLHLVLRLRGG 608
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 667
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 668 NI-QKESTLHLVLRLRGG 684
>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 60 NI-QKESTLHLVLRLRGG 76
>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL +T + +EP +T++ +K KI+ ++G P Q+LI+AGK L D + DY
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 65 RIDEKNFVVVMVTKTKAG 82
I +K + +V + + G
Sbjct: 60 NI-QKESTLHLVLRLRGG 76
>gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens]
Length = 439
Score = 45.4 bits (106), Expect = 8e-05
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSV 141
G + +PP+ SP A PE + P P G + P A KSPS+ P + E G+
Sbjct: 262 GNKSPSPPDGSPAATPEIRVNHEPEPAGGAT---PGATLPKSPSQ---PAEASEVAGGTQ 315
Query: 142 PSSGSSGREEDAASTLVTGS 161
P++G+ E AAS + S
Sbjct: 316 PAAGAQEPGETAASEAASSS 335
>gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens]
Length = 454
Score = 45.4 bits (106), Expect = 8e-05
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSV 141
G + +PP+ SP A PE + P P G + P A KSPS+ P + E G+
Sbjct: 277 GNKSPSPPDGSPAATPEIRVNHEPEPAGGAT---PGATLPKSPSQ---PAEASEVAGGTQ 330
Query: 142 PSSGSSGREEDAASTLVTGS 161
P++G+ E AAS + S
Sbjct: 331 PAAGAQEPGETAASEAASSS 350
>gi|5453760 neural precursor cell expressed, developmentally
down-regulated 8 [Homo sapiens]
Length = 81
Score = 45.4 bits (106), Expect = 8e-05
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL + +I +EP + V+ +KE++E ++G P Q+LIY+GK ++D+ DY
Sbjct: 3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEG---IPPQQQRLIYSGKQMNDEKTAADY 59
Query: 65 RI 66
+I
Sbjct: 60 KI 61
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 42.7 bits (99), Expect = 5e-04
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSV 141
G + +PP+ SP A PE + P P G + P A KSPS+ PT SP +GS+
Sbjct: 262 GNKSPSPPDGSPAATPEIRVNHEPEPAGGAT---PGATLPKSPSQ---PTESP---AGSL 312
Query: 142 PSSGSSGRE 150
PS S E
Sbjct: 313 PSGEPSAAE 321
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 42.7 bits (99), Expect = 5e-04
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 82 GQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSV 141
G + +PP+ SP A PE + P P G + P A KSPS+ PT SP +GS+
Sbjct: 293 GNKSPSPPDGSPAATPEIRVNHEPEPAGGAT---PGATLPKSPSQ---PTESP---AGSL 343
Query: 142 PSSGSSGRE 150
PS S E
Sbjct: 344 PSGEPSAAE 352
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 42.0 bits (97), Expect = 9e-04
Identities = 48/193 (24%), Positives = 67/193 (34%), Gaps = 41/193 (21%)
Query: 81 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS 140
A T+ P ++ TA E ST++ +P S + PA+ SE+S S SG+
Sbjct: 2225 ASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGT 2284
Query: 141 VPSSG---SSGREEDAASTLVTGSEYETML-----------------------------T 168
PSS +SGR E S + GS T L
Sbjct: 2285 TPSSAHSTTSGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPA 2344
Query: 169 EIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPE-------PEHGSVQESQVSEQ 221
+ S+G E + R+ + H V T PG E GS + +
Sbjct: 2345 SMTSLGVGEESTTS--RSQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRT 2402
Query: 222 PATEAAGENPLEF 234
P T GE P F
Sbjct: 2403 PTTSVRGEEPTTF 2415
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 81 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS 140
A T+ P ++ TA E ST++ +P S + PA+ SE+S S SG+
Sbjct: 1142 ASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGT 1201
Query: 141 VPSSG---SSGREEDAASTLVTGSEYETML 167
PSS +SGR E S + GS T L
Sbjct: 1202 TPSSAHSTTSGRGESTTSRISPGSTEITTL 1231
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 81 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS 140
A T+ P ++ TA E ST++ +P S + PA+ SE+S S SG+
Sbjct: 2699 ASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGT 2758
Query: 141 VPSSG---SSGREEDAASTLVTGSEYETML 167
PSS +SGR E S + GS T L
Sbjct: 2759 TPSSAHSTTSGRGESTTSRISPGSTEITTL 2788
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 81 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS 140
A T+ P ++ TA E ST++ +P S + PA+ SE+S S SG+
Sbjct: 3782 ASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGT 3841
Query: 141 VPSSG---SSGREEDAASTLVTGSEYETML 167
PSS +SGR E S + GS T L
Sbjct: 3842 TPSSAHSTTSGRGESTTSRISPGSTEITTL 3871
Score = 30.8 bits (68), Expect = 2.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKS-PSEESAPTTSPESVSGSVPSS 144
S+P + T +P S+TS + S SH P + + P + P S S + S S
Sbjct: 3611 SSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTT-SHSSP 3669
Query: 145 GSSGREEDAASTLVTGSEYET 165
GS+ AST +GS E+
Sbjct: 3670 GSTDTTLLPASTTTSGSSQES 3690
Score = 30.4 bits (67), Expect = 2.6
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSS 144
T + P ++ +A E TS+ +P S + P + SEES + S +G P
Sbjct: 4783 TISSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTTSGRSEESTASHSSPDTNGITPLP 4842
Query: 145 G---SSGREEDAASTLVT-GSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV---EY 197
+SGR ++ + ++ GS T+ + + G + + L +S +P + +
Sbjct: 4843 AHFTTSGRIAESTTFYISPGSMETTLASTATTPGLSAKSTI--LYSSSRSPDQTLSPASM 4900
Query: 198 LLTGIPGSPEPEHGSVQESQVSEQPAT 224
+ I G P + + + + PA+
Sbjct: 4901 TSSSISGEPTSLYSQAESTHTTAFPAS 4927
Score = 29.6 bits (65), Expect = 4.4
Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 15/155 (9%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS----- 140
S+P PESST+ + S SH PS SA P S S
Sbjct: 1917 SSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSTA 1976
Query: 141 ----VPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVE 196
SS +SGR E++ ++ + T++ R L S +P +
Sbjct: 1977 TTHFPDSSTTSGRSEESTASHSSQDATGTIVLP------ARSTTSVLLGESTTSPISSGS 2030
Query: 197 YLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENP 231
T +PGS S + + P + A +P
Sbjct: 2031 METTALPGSTTTPGLSEKSTTFHSSPRSPATTLSP 2065
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPP----AAREDKSPSEESAPTTSPESVSGS 140
T P ++ T E ST+F P+S + P P A + S + S P+++P + +
Sbjct: 4205 TLTPASSTSTGLQEESTTFQSWPSSSDTTPSPPSTTAVPVEVSTTYHSRPSSTPTTHFSA 4264
Query: 141 VPSSGSSGREEDAAS 155
SS + GR E++ +
Sbjct: 4265 --SSTTLGRSEESTT 4277
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 81 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS 140
+ + TS P + +A + ST++ +P+S + A+ SEES P S + +
Sbjct: 426 SSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATAT 485
Query: 141 VP---SSGSSGREEDAASTLVTGSEYETM 166
P S +SG E++ + + +TM
Sbjct: 486 TPPPARSATSGHVEESTAYHRSPGSTQTM 514
Score = 29.3 bits (64), Expect = 5.8
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPP----AAREDKSPSEESAPTTSPESVSGS 140
T P ++ E ST+F P+S + P P AA + S + S P+++P + +
Sbjct: 1565 TLTPASSTSAGLQEESTTFQSWPSSSDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSA 1624
Query: 141 VPSSGSSGREEDAAS 155
SS + GR E++ +
Sbjct: 1625 --SSTTLGRSEESTT 1637
Score = 29.3 bits (64), Expect = 5.8
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPP----AAREDKSPSEESAPTTSPESVSGS 140
T P ++ E ST+F P+S + P P AA + S + S P+++P + +
Sbjct: 3122 TLTPASSTSAGLQEESTTFQSWPSSSDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSA 3181
Query: 141 VPSSGSSGREEDAAS 155
SS + GR E++ +
Sbjct: 3182 --SSTTLGRSEESTT 3194
Score = 28.9 bits (63), Expect = 7.5
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKS-PSEESAPTTSPESVSGSVPSS 144
S+P + T +P S+TS + S SH P + + P + P S S + S S
Sbjct: 2054 SSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTT-SHSSP 2112
Query: 145 GSSGREEDAASTLVTGSEYET 165
GS+ AST +G E+
Sbjct: 2113 GSTDTTLLPASTTTSGPSQES 2133
Score = 28.5 bits (62), Expect = 9.8
Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 15/155 (9%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS----- 140
S+P PES T+ S SH +PS SA P S S
Sbjct: 834 SSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTA 893
Query: 141 ----VPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVE 196
SS +SGR E++ ++ + T++ R L S +P +
Sbjct: 894 TTHFPDSSTTSGRSEESTASHSSQDATGTIVLP------ARSTTSVLLGESTTSPISSGS 947
Query: 197 YLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENP 231
T +PGS S + + P + A +P
Sbjct: 948 METTALPGSTTTPGLSERSTTFHSSPRSPATTLSP 982
Score = 28.5 bits (62), Expect = 9.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTS-PESVSGSV-P 142
T+ P + E+ST+F +P S + PA+ EES + S P S +V P
Sbjct: 1229 TTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVSP 1288
Query: 143 SSGSSGREEDAASTLVTGSEYETMLT 168
+S ++ + ++T+ + S T T
Sbjct: 1289 ASTTTPGLSEESTTVYSSSRGSTETT 1314
Score = 28.5 bits (62), Expect = 9.8
Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 15/155 (9%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGS----- 140
S+P PES T+ S SH +PS SA P S S
Sbjct: 3474 SSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTA 3533
Query: 141 ----VPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVE 196
SS +SGR E++ ++ + T++ R L S +P +
Sbjct: 3534 TTHFPDSSTTSGRSEESTASHSSQDATGTIVLP------ARSTTSVLLGESTTSPISSGS 3587
Query: 197 YLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENP 231
T +PGS S + + P + A +P
Sbjct: 3588 METTALPGSTTTPGLSEKSTTFHSSPRSPATTLSP 3622
Score = 28.5 bits (62), Expect = 9.8
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKS-PSEESAPTTSPESVSGSVPSS 144
S+P T +P S+TS + S SH P + + PS + P S ES + S S
Sbjct: 4336 SSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSMHTTAFPSSTTMPGVSQES-TASHSSP 4394
Query: 145 GSSGREEDAAST 156
GS+ ST
Sbjct: 4395 GSTDTTLSPGST 4406
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 42.0 bits (97), Expect = 9e-04
Identities = 23/61 (37%), Positives = 27/61 (44%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSG 145
S PPEASP + P + P P + PPP A P EES + PE S P
Sbjct: 537 SPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEA 596
Query: 146 S 146
S
Sbjct: 597 S 597
Score = 39.7 bits (91), Expect = 0.004
Identities = 23/62 (37%), Positives = 26/62 (41%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSS 144
TS PPEAS + P + P P PPP A P EES + PE S P
Sbjct: 563 TSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPE 622
Query: 145 GS 146
S
Sbjct: 623 AS 624
Score = 38.5 bits (88), Expect = 0.009
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVP 142
S PPE SP + P + P P + PPP P E+S + PE S+P
Sbjct: 663 SPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLP 719
Score = 38.1 bits (87), Expect = 0.012
Identities = 22/61 (36%), Positives = 27/61 (44%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSG 145
S PPE SPT+ P ++ P P + P P A P EES + PE S P
Sbjct: 450 SPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPES 509
Query: 146 S 146
S
Sbjct: 510 S 510
Score = 38.1 bits (87), Expect = 0.012
Identities = 21/61 (34%), Positives = 25/61 (40%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSG 145
S PPE SP + P + P P PPP P EES + PE+ S P
Sbjct: 636 SPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPED 695
Query: 146 S 146
S
Sbjct: 696 S 696
Score = 37.0 bits (84), Expect = 0.028
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 15/76 (19%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMS---------------HPPPAAREDKSPSEESAP 130
S PPE SP + P S+ F P S +S PPP A P EES
Sbjct: 495 SPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPL 554
Query: 131 TTSPESVSGSVPSSGS 146
+ PE + S P S
Sbjct: 555 SPPPEELPTSPPPEAS 570
Score = 36.6 bits (83), Expect = 0.036
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 86 SAPPEASP-TAAPESSTSFPPAPTSGMS--------HPPPAAREDKSPSEESAPTTSPES 136
S PPE SP + PE+S FPP S +S PPP A P E+S + PE
Sbjct: 582 SPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEE 641
Query: 137 VSGSVP 142
S P
Sbjct: 642 SPMSPP 647
Score = 35.8 bits (81), Expect = 0.062
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 86 SAPPEASPTAAP-ESSTSFPPAPTSGMSHPPPAAR-----EDK--SPSEESAPTTSPESV 137
S PPEAS P E S PP S +S PP A+R ED SP E +P + P V
Sbjct: 591 SPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEV 650
Query: 138 SGSVP 142
S P
Sbjct: 651 SRLSP 655
Score = 35.4 bits (80), Expect = 0.080
Identities = 20/61 (32%), Positives = 23/61 (37%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSG 145
S PPE SP + P + P P P P P EES + PE S P
Sbjct: 627 SPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEA 686
Query: 146 S 146
S
Sbjct: 687 S 687
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/61 (32%), Positives = 25/61 (40%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSG 145
S PPE SP + P + P P + PP P EES + PE+ S P
Sbjct: 573 SPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPED 632
Query: 146 S 146
S
Sbjct: 633 S 633
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 86 SAPPEASPTAAP-ESSTSFPPAPTSGMSHPPPAAR-------EDKSPSEESAPTTSPESV 137
S PPEAS + P E S PP S MS PP +R SP E +P + P
Sbjct: 618 SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEE 677
Query: 138 SGSVPSSGSS 147
S + P +S
Sbjct: 678 SPTSPPPEAS 687
Score = 34.7 bits (78), Expect = 0.14
Identities = 43/172 (25%), Positives = 59/172 (34%), Gaps = 7/172 (4%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSS 144
TS PPEAS + P + P P + PPP P EES PE S
Sbjct: 680 TSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSE 739
Query: 145 GSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPG 204
G L E + + + L A PH + + G
Sbjct: 740 GPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQ--AEGPHL 797
Query: 205 SPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLP 256
SP+PE + S +E+P E P L QP+ ++ + P L P
Sbjct: 798 SPQPE--ELHLSPQTEEPHLSPVPEEPC--LSPQPEESHLSPQ-SEEPCLSP 844
Score = 33.1 bits (74), Expect = 0.40
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 219 SEQPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQE 278
S QP A L+ L+ Q Q Q +Q+ QQ L QQL Q+ Q QQ + Q+
Sbjct: 3884 SGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQ-QQLQQQQLQQQQQQQQLQQ 3942
Query: 279 QFIQMLNEPPGELADISDVEGEVGAIGEEAPQMNYIQ-----VTPQEKEAIERLKALGFP 333
Q Q L + +L + + ++ QM + ++PQ+++ + G P
Sbjct: 3943 QQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMP 4002
Score = 32.7 bits (73), Expect = 0.52
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 12/67 (17%)
Query: 86 SAPPEASP----------TAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPE 135
S PPE S + PE S PP S S PP A+R SP E +PT+ P
Sbjct: 645 SPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASR--LSPPPEDSPTSPPP 702
Query: 136 SVSGSVP 142
S + P
Sbjct: 703 EDSPASP 709
Score = 32.7 bits (73), Expect = 0.52
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 200 TGIPGSPEPEHGSVQESQVSEQ-PATEAAGENPLEFLRDQPQFQNMR-QVIQQNPALLPA 257
+G P GS+Q+ Q +Q + + + L+ Q Q Q + Q QQ L
Sbjct: 3884 SGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQ 3943
Query: 258 LLQQLGQENPQLLQQISRHQEQFIQ 282
QQL Q+ QL QQ + Q+QF Q
Sbjct: 3944 QQQQLQQQQQQLQQQQQQQQQQFQQ 3968
Score = 30.8 bits (68), Expect = 2.0
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 87 APPEASPTAA---------PESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESV 137
+PPE SP + PE+S PP S +S PPP P E S + PE
Sbjct: 521 SPPEESPPSPALETPLSPPPEASPLSPPFEESPLS-PPPEELPTSPPPEASRLSPPPEES 579
Query: 138 SGSVPSSGSSGREEDAASTL 157
S P S AS L
Sbjct: 580 PMSPPPEESPMSPPPEASRL 599
Score = 30.4 bits (67), Expect = 2.6
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 90 EASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVP 142
E P P + P P + PPP A P EE + PE++ S P
Sbjct: 436 EEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRP 488
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 214 QESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQI 273
Q+ Q+ +Q + + L+ + Q Q Q +Q+ QQ L QQL Q+ Q QQ
Sbjct: 3908 QQQQLQQQQQQQLQQQQQLQQQQLQQQ-QQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQF 3966
Query: 274 SRHQEQ 279
+ Q+Q
Sbjct: 3967 QQQQQQ 3972
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTS-GMSHP-------PPAAREDKSPSEESAPTTSPES 136
TS PPEAS + P P P + +S P PP SP ES+P + E
Sbjct: 458 TSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEE 517
Query: 137 VSGSVP 142
S P
Sbjct: 518 SPLSPP 523
>gi|154426306 kinesin family member 24 [Homo sapiens]
Length = 1368
Score = 41.6 bits (96), Expect = 0.001
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 30/222 (13%)
Query: 77 TKTKAGQGTSAPPEASPTAAPESST----SFPPAPTSGMSHPPP------AAREDKSPSE 126
T+ K TS PP T+AP+ S S + H P + K E
Sbjct: 604 TRGKVHPLTSHPPNIPFTSAPKVSGKRGGSRGSPSQEWVIHASPVKGTVRSGHVAKKKPE 663
Query: 127 ESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRA 186
ESAP S ++ G+ G R LV G + T ++ ++ ++++V+ +
Sbjct: 664 ESAPLCSEKNRMGNKTVLGWESRASGPGEGLVRG-KLSTKCKKVQTVQPVQKQLVSRVEL 722
Query: 187 SYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQ 246
S+ N H EY G+P +PA+EA P + + Q
Sbjct: 723 SFGNAHHRAEYSQDSQRGTP-------------ARPASEAWTNIPPHQKEREEHLRFYHQ 769
Query: 247 VIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPP 288
QQ P LLQQ + P L + + +++ Q+ NE P
Sbjct: 770 QFQQ-----PPLLQQKLKYQP-LKRSLRQYRPPEGQLTNETP 805
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 79 TKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSH------PPPAAREDKSPSEESAP-- 130
T A +SAPPE TAAP + ++ PAP S + PP + PS SAP
Sbjct: 222 TPAPPSSSAPPET--TAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPE 279
Query: 131 -TTSPESVSGSVPSSGSS-GREEDAASTLVTGSEYETML 167
T +P + S + P+ SS +E A+ + T + T L
Sbjct: 280 TTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTL 318
Score = 38.5 bits (88), Expect = 0.009
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPP---PAAREDKSPSEESA--PT---TSPES 136
T+APP S T S+S PP T+ PP PA +P E +A PT T+P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAP 248
Query: 137 VSGSVPSSGSSGREEDAASTL 157
+S S P ++ +A+TL
Sbjct: 249 LSSSAPPETTAVPPTPSATTL 269
Score = 37.4 bits (85), Expect = 0.021
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 85 TSAPPEASPT-------AAPESSTSFPPAPTSGMSHPP-PAAREDKSPSEESAPTTSPES 136
T+APP S T +AP +T+ PP P++ PP +A + + + + P T+P
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 137 VSGSVPSSGSSGREEDAAST 156
S S P ++ +A+T
Sbjct: 226 PSSSAPPETTAAPPTPSATT 245
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHP---PPAAREDKSPSE-ESAPTTSPESVSGS 140
T+ PP S T SS S PP T+ P PA +P E +AP T+P S +
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 141 VPSSGSSGREEDAASTLVTGSEYETMLT 168
+ S E AA T T + T T
Sbjct: 318 LAPDTS---ETSAAPTHQTTTSVTTQTT 342
Score = 33.5 bits (75), Expect = 0.31
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAP---TTSPESVSGSV 141
T+APP T S+S PP T+ PP + +P SAP T P + S +
Sbjct: 212 TAAPPTPPATTPAPPSSSAPPETTAA---PPTPSATTPAPLSSSAPPETTAVPPTPSATT 268
Query: 142 --PSSGSSGREEDAA 154
PSS S+ E AA
Sbjct: 269 LDPSSASAPPETTAA 283
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSG------MSHPPPAAREDKSPSEESAP---TTSPES 136
++P TAAP + ++ PAP S + PP + ++P SAP T +P +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 137 VSGSVPSSGSSGREEDAASTLVTGS 161
+ P+ SS + + T S
Sbjct: 218 PPATTPAPPSSSAPPETTAAPPTPS 242
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 79 TKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSH------PPPAAREDKSPSEESAP-- 130
T A +SAPPE TAAP + ++ PAP S + PP + PS SAP
Sbjct: 222 TPAPPSSSAPPET--TAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPE 279
Query: 131 -TTSPESVSGSVPSSGSS-GREEDAASTLVTGSEYETML 167
T +P + S + P+ SS +E A+ + T + T L
Sbjct: 280 TTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTL 318
Score = 38.5 bits (88), Expect = 0.009
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPP---PAAREDKSPSEESA--PT---TSPES 136
T+APP S T S+S PP T+ PP PA +P E +A PT T+P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAP 248
Query: 137 VSGSVPSSGSSGREEDAASTL 157
+S S P ++ +A+TL
Sbjct: 249 LSSSAPPETTAVPPTPSATTL 269
Score = 37.4 bits (85), Expect = 0.021
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 85 TSAPPEASPT-------AAPESSTSFPPAPTSGMSHPP-PAAREDKSPSEESAPTTSPES 136
T+APP S T +AP +T+ PP P++ PP +A + + + + P T+P
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 137 VSGSVPSSGSSGREEDAAST 156
S S P ++ +A+T
Sbjct: 226 PSSSAPPETTAAPPTPSATT 245
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHP---PPAAREDKSPSE-ESAPTTSPESVSGS 140
T+ PP S T SS S PP T+ P PA +P E +AP T+P S +
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 141 VPSSGSSGREEDAASTLVTGSEYETMLT 168
+ S E AA T T + T T
Sbjct: 318 LAPDTS---ETSAAPTHQTTTSVTTQTT 342
Score = 33.5 bits (75), Expect = 0.31
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAP---TTSPESVSGSV 141
T+APP T S+S PP T+ PP + +P SAP T P + S +
Sbjct: 212 TAAPPTPPATTPAPPSSSAPPETTAA---PPTPSATTPAPLSSSAPPETTAVPPTPSATT 268
Query: 142 --PSSGSSGREEDAA 154
PSS S+ E AA
Sbjct: 269 LDPSSASAPPETTAA 283
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSG------MSHPPPAAREDKSPSEESAP---TTSPES 136
++P TAAP + ++ PAP S + PP + ++P SAP T +P +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 137 VSGSVPSSGSSGREEDAASTLVTGS 161
+ P+ SS + + T S
Sbjct: 218 PPATTPAPPSSSAPPETTAAPPTPS 242
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 79 TKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSH------PPPAAREDKSPSEESAP-- 130
T A +SAPPE TAAP + ++ PAP S + PP + PS SAP
Sbjct: 222 TPAPPSSSAPPET--TAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPE 279
Query: 131 -TTSPESVSGSVPSSGSS-GREEDAASTLVTGSEYETML 167
T +P + S + P+ SS +E A+ + T + T L
Sbjct: 280 TTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTL 318
Score = 38.5 bits (88), Expect = 0.009
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPP---PAAREDKSPSEESA--PT---TSPES 136
T+APP S T S+S PP T+ PP PA +P E +A PT T+P
Sbjct: 189 TAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAP 248
Query: 137 VSGSVPSSGSSGREEDAASTL 157
+S S P ++ +A+TL
Sbjct: 249 LSSSAPPETTAVPPTPSATTL 269
Score = 37.4 bits (85), Expect = 0.021
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 85 TSAPPEASPT-------AAPESSTSFPPAPTSGMSHPP-PAAREDKSPSEESAPTTSPES 136
T+APP S T +AP +T+ PP P++ PP +A + + + + P T+P
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAP 225
Query: 137 VSGSVPSSGSSGREEDAAST 156
S S P ++ +A+T
Sbjct: 226 PSSSAPPETTAAPPTPSATT 245
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHP---PPAAREDKSPSE-ESAPTTSPESVSGS 140
T+ PP S T SS S PP T+ P PA +P E +AP T+P S +
Sbjct: 258 TAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTT 317
Query: 141 VPSSGSSGREEDAASTLVTGSEYETMLT 168
+ S E AA T T + T T
Sbjct: 318 LAPDTS---ETSAAPTHQTTTSVTTQTT 342
Score = 33.5 bits (75), Expect = 0.31
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 85 TSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAP---TTSPESVSGSV 141
T+APP T S+S PP T+ PP + +P SAP T P + S +
Sbjct: 212 TAAPPTPPATTPAPPSSSAPPETTAA---PPTPSATTPAPLSSSAPPETTAVPPTPSATT 268
Query: 142 --PSSGSSGREEDAA 154
PSS S+ E AA
Sbjct: 269 LDPSSASAPPETTAA 283
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 86 SAPPEASPTAAPESSTSFPPAPTSG------MSHPPPAAREDKSPSEESAP---TTSPES 136
++P TAAP + ++ PAP S + PP + ++P SAP T +P +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPT 217
Query: 137 VSGSVPSSGSSGREEDAASTLVTGS 161
+ P+ SS + + T S
Sbjct: 218 PPATTPAPPSSSAPPETTAAPPTPS 242
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 37/178 (20%)
Query: 95 AAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTS--PESVSGSVPSSGSSGREED 152
A P + PPAP + S P A P + +AP TS PE SG+ +G G +
Sbjct: 1371 AGPSNPPGAPPAPLAPSSPPVTAL-----PQDGAAPATSTMPEPASGTASQAGGPGTPQG 1425
Query: 153 AASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGI-PGSPEPEHG 211
S L T A + AV+ L+ G+ P +P PE
Sbjct: 1426 LTSELETSQPL----------------------AETHEAPLAVQPLVVGLAPCTPAPEAA 1463
Query: 212 SVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQL 269
S +++ +P A E P + + Q LLPA + + QL
Sbjct: 1464 STRDASAPREPLPPPAPE-------PSPHSGTPQPALGQPAPLLPAAVGAVSLATSQL 1514
>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL+ +T + +EP + ++ +K KI+ ++G P Q+LI+AGK L D + D
Sbjct: 71 IFVKTLRGKTITLEVEPSDAIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDC 127
Query: 65 RIDEK 69
I ++
Sbjct: 128 NIQKE 132
>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL+ +T + +EP + ++ +K KI+ ++G P Q+LI+AGK L D + D
Sbjct: 71 IFVKTLRGKTITLEVEPSDAIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDC 127
Query: 65 RIDEK 69
I ++
Sbjct: 128 NIQKE 132
>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
I +KTL+ +T + +EP + ++ +K KI+ ++G P Q+LI+AGK L D + D
Sbjct: 71 IFVKTLRGKTITLEVEPSDAIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDC 127
Query: 65 RIDEK 69
I ++
Sbjct: 128 NIQKE 132
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,337,520
Number of Sequences: 37866
Number of extensions: 816435
Number of successful extensions: 11785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 825
Number of HSP's that attempted gapping in prelim test: 7540
Number of HSP's gapped (non-prelim): 4280
length of query: 363
length of database: 18,247,518
effective HSP length: 104
effective length of query: 259
effective length of database: 14,309,454
effective search space: 3706148586
effective search space used: 3706148586
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.