Guide to the Human Genome
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Search of human proteins with 13375787

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo
sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo sap...   437   e-123
gi|218751877 EF-hand calcium binding domain 1 isoform b [Homo sa...   306   6e-84
gi|19913443 hippocalcin-like 1 [Homo sapiens]                          79   2e-15
gi|19913441 hippocalcin-like 1 [Homo sapiens]                          79   2e-15
gi|98985795 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985793 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985791 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985789 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985787 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985785 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985783 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|98985778 neurocalcin delta [Homo sapiens]                           78   6e-15
gi|19913446 hippocalcin [Homo sapiens]                                 78   6e-15
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso...    73   2e-13
gi|78190495 Kv channel interacting protein 3 isoform 2 [Homo sap...    71   6e-13
gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo sapi...    71   6e-13
gi|78190488 Kv channel interacting protein 4 isoform 3 [Homo sap...    70   1e-12
gi|78190486 Kv channel interacting protein 4 isoform 5 [Homo sap...    70   1e-12
gi|22212902 Kv channel interacting protein 4 isoform 4 [Homo sap...    70   1e-12
gi|22212900 Kv channel interacting protein 4 isoform 3 [Homo sap...    70   1e-12
gi|22212898 Kv channel interacting protein 4 isoform 2 [Homo sap...    70   1e-12
gi|24586671 Kv channel interacting protein 4 isoform 1 [Homo sap...    70   1e-12
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is...    69   3e-12
gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo sap...    69   3e-12
gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo sap...    69   3e-12
gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo sap...    69   3e-12
gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo sap...    69   3e-12
gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo sap...    69   3e-12
gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo sap...    69   3e-12
gi|192447423 frequenin homolog isoform 2 [Homo sapiens]                68   5e-12

>gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo
           sapiens]
          Length = 211

 Score =  437 bits (1123), Expect = e-123
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MNRKKLQKLTDTLTKNCKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVT 60
           MNRKKLQKLTDTLTKNCKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVT
Sbjct: 1   MNRKKLQKLTDTLTKNCKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVT 60

Query: 61  FGMTDDMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFI 120
           FGMTDDMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFI
Sbjct: 61  FGMTDDMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFI 120

Query: 121 SKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLL 180
           SKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLL
Sbjct: 121 SKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLL 180

Query: 181 LEAFGPCLPDPKSQMEFEAQVFKDPNEFNDM 211
           LEAFGPCLPDPKSQMEFEAQVFKDPNEFNDM
Sbjct: 181 LEAFGPCLPDPKSQMEFEAQVFKDPNEFNDM 211


>gi|218751877 EF-hand calcium binding domain 1 isoform b [Homo
           sapiens]
          Length = 159

 Score =  306 bits (785), Expect = 6e-84
 Identities = 158/211 (74%), Positives = 159/211 (75%), Gaps = 52/211 (24%)

Query: 1   MNRKKLQKLTDTLTKNCKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVT 60
           MNRKKLQKLTDTLTKNCKH                                         
Sbjct: 1   MNRKKLQKLTDTLTKNCKH----------------------------------------- 19

Query: 61  FGMTDDMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFI 120
                      +FRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFI
Sbjct: 20  -----------LFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFI 68

Query: 121 SKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLL 180
           SKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLL
Sbjct: 69  SKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLL 128

Query: 181 LEAFGPCLPDPKSQMEFEAQVFKDPNEFNDM 211
           LEAFGPCLPDPKSQMEFEAQVFKDPNEFNDM
Sbjct: 129 LEAFGPCLPDPKSQMEFEAQVFKDPNEFNDM 159


>gi|19913443 hippocalcin-like 1 [Homo sapiens]
          Length = 193

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 43/131 (32%), Positives = 76/131 (58%), Gaps = 10/131 (7%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+IS+ EM  ++
Sbjct: 66  EHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E   D +    ++MD ++DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTDKI---FRQMDTNNDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQ 194
              C P   SQ
Sbjct: 183 L-QCDPSSASQ 192


>gi|19913441 hippocalcin-like 1 [Homo sapiens]
          Length = 193

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 43/131 (32%), Positives = 76/131 (58%), Gaps = 10/131 (7%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+IS+ EM  ++
Sbjct: 66  EHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E   D +    ++MD ++DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTDKI---FRQMDTNNDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQ 194
              C P   SQ
Sbjct: 183 L-QCDPSSASQ 192


>gi|98985795 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985793 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985791 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985789 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985787 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985785 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985783 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|98985778 neurocalcin delta [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD + DG ++  E+I  LS+  RG LE+K+K+ F ++DL+G+G+ISK EM  ++
Sbjct: 66  EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD + DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQMEF 197
              C  DP S  +F
Sbjct: 183 L-QC--DPSSAGQF 193


>gi|19913446 hippocalcin [Homo sapiens]
          Length = 193

 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 43/131 (32%), Positives = 76/131 (58%), Gaps = 10/131 (7%)

Query: 70  DRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHML 129
           + VFR FD ++DG ++  E+I  LS+  RG LE+K+ + F ++DL+G+G+IS+EEM  ++
Sbjct: 66  EHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIV 125

Query: 130 K------NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183
           +      +S++K P +E   E      E   ++MD ++DGKLS  ++    + +  ++  
Sbjct: 126 QAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIVRL 182

Query: 184 FGPCLPDPKSQ 194
              C P   SQ
Sbjct: 183 L-QCDPSSASQ 192


>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
           isoform [Homo sapiens]
          Length = 173

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 17  CKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVTFGMTDDMIMDRVFRGF 76
           C HF+  E+  L + F  L   +++ G +   +  +   + H       + ++ RV   F
Sbjct: 15  CSHFDNDEIKRLGRRFKKL--DLDKSGSLSVEEFMSLPELRH-------NPLVRRVIDVF 65

Query: 77  DKDNDGCVNVLEWIHGLSLF-LRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLK 135
           D D DG V+  E+I G S F ++G  E+K+++ F ++D++ DG+IS  E+F +LK  +  
Sbjct: 66  DTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMV-- 123

Query: 136 QPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVRE 176
                  D  ++ LV+ T+  +D D DGK+SF ++   VR+
Sbjct: 124 --GNNLTDWQLQQLVDKTIIILDKDGDGKISFEEFSAVVRD 162


>gi|78190495 Kv channel interacting protein 3 isoform 2 [Homo
           sapiens]
          Length = 230

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD D +G ++  +++ GLS+ LRG++ EK+K+ F ++D+N DG+I+KEEM  ++K+
Sbjct: 108 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKS 167

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   ++   + VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 168 IYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIM 220


>gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo
           sapiens]
          Length = 256

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD D +G ++  +++ GLS+ LRG++ EK+K+ F ++D+N DG+I+KEEM  ++K+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKS 193

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   ++   + VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 194 IYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIM 246


>gi|78190488 Kv channel interacting protein 4 isoform 3 [Homo
           sapiens]
          Length = 188

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLK- 130
           +F  FD D++G V+  ++I GLS+ LRG+++EK+ + F ++D+N DG+I+KEEM  ++K 
Sbjct: 66  LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 125

Query: 131 --NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
             + + K       ++  +  VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 126 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 178


>gi|78190486 Kv channel interacting protein 4 isoform 5 [Homo
           sapiens]
          Length = 225

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLK- 130
           +F  FD D++G V+  ++I GLS+ LRG+++EK+ + F ++D+N DG+I+KEEM  ++K 
Sbjct: 103 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 162

Query: 131 --NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
             + + K       ++  +  VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 163 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 215


>gi|22212902 Kv channel interacting protein 4 isoform 4 [Homo
           sapiens]
          Length = 229

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLK- 130
           +F  FD D++G V+  ++I GLS+ LRG+++EK+ + F ++D+N DG+I+KEEM  ++K 
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166

Query: 131 --NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
             + + K       ++  +  VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 167 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 219


>gi|22212900 Kv channel interacting protein 4 isoform 3 [Homo
           sapiens]
          Length = 188

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLK- 130
           +F  FD D++G V+  ++I GLS+ LRG+++EK+ + F ++D+N DG+I+KEEM  ++K 
Sbjct: 66  LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 125

Query: 131 --NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
             + + K       ++  +  VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 126 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 178


>gi|22212898 Kv channel interacting protein 4 isoform 2 [Homo
           sapiens]
          Length = 216

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLK- 130
           +F  FD D++G V+  ++I GLS+ LRG+++EK+ + F ++D+N DG+I+KEEM  ++K 
Sbjct: 94  LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 153

Query: 131 --NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
             + + K       ++  +  VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 154 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 206


>gi|24586671 Kv channel interacting protein 4 isoform 1 [Homo
           sapiens]
          Length = 250

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 70/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLK- 130
           +F  FD D++G V+  ++I GLS+ LRG+++EK+ + F ++D+N DG+I+KEEM  ++K 
Sbjct: 128 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 187

Query: 131 --NSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
             + + K       ++  +  VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 188 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIM 240


>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
           isoform 1 [Homo sapiens]
          Length = 170

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 14/155 (9%)

Query: 17  CKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVTFGMTDDMIMDRVFRGF 76
           C HF+  E+  L K F  L   ++  G    L    F ++      +  + ++ RV   F
Sbjct: 12  CSHFDADEIKRLGKRFKKL--DLDNSG---SLSVEEFMSLPE----LQQNPLVQRVIDIF 62

Query: 77  DKDNDGCVNVLEWIHGLSLF-LRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLK 135
           D D +G V+  E+I G+S F ++G  E+K+++ F ++D++ DG+IS  E+F +LK  +  
Sbjct: 63  DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV-- 120

Query: 136 QPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADY 170
                  D  ++ +V+ T+   D D DG++SF ++
Sbjct: 121 --GNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153


>gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo
           sapiens]
          Length = 225

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD ++DG V+  +++ GLS+ LRG++++++ + F ++DLN DG I+KEEM  ++K+
Sbjct: 103 LFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKS 162

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   +E  ++ VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 163 IYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIM 215


>gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo
           sapiens]
          Length = 220

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD ++DG V+  +++ GLS+ LRG++++++ + F ++DLN DG I+KEEM  ++K+
Sbjct: 98  LFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKS 157

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   +E  ++ VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 158 IYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIM 210


>gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo
           sapiens]
          Length = 252

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD ++DG V+  +++ GLS+ LRG++++++ + F ++DLN DG I+KEEM  ++K+
Sbjct: 130 LFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKS 189

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   +E  ++ VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 190 IYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIM 242


>gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo
           sapiens]
          Length = 227

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD ++DG V+  +++ GLS+ LRG++++++ + F ++DLN DG I+KEEM  ++K+
Sbjct: 105 LFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKS 164

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   +E  ++ VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 165 IYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIM 217


>gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo
           sapiens]
          Length = 285

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD ++DG V+  +++ GLS+ LRG++++++ + F ++DLN DG I+KEEM  ++K+
Sbjct: 163 LFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKS 222

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   +E  ++ VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 223 IYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIM 275


>gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo
           sapiens]
          Length = 270

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 72  VFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKN 131
           +F  FD ++DG V+  +++ GLS+ LRG++++++ + F ++DLN DG I+KEEM  ++K+
Sbjct: 148 LFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKS 207

Query: 132 SLLKQPSEEDP---DEGIKDLVEITLKKMDHDHDGKLSFADY-ELAVREETLL 180
                     P   +E  ++ VE   +KMD + DG ++  ++ E   ++E ++
Sbjct: 208 IYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIM 260


>gi|192447423 frequenin homolog isoform 2 [Homo sapiens]
          Length = 172

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 10/143 (6%)

Query: 48  LDRNAFRNILHVTFGMTDDM-IMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMK 106
           LD   F+ I    F   D       VF  FD++ DG +   E+I  LS+  RG+L+EK++
Sbjct: 25  LDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR 84

Query: 107 YCFEVFDLNGDGFISKEEM------FHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHD 160
           + F+++DL+ DG+I++ EM       + +  + ++ P EE+  E   D +      MD +
Sbjct: 85  WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRI---FAMMDKN 141

Query: 161 HDGKLSFADYELAVREETLLLEA 183
            DGKL+  +++   + +  +++A
Sbjct: 142 ADGKLTLQEFQEGSKADPSIVQA 164


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.142    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,012,048
Number of Sequences: 37866
Number of extensions: 347610
Number of successful extensions: 1320
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 363
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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