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Search of human proteins with 47933381
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform
1 [Homo sapiens]
(162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform ... 346 6e-96
gi|145301543 ubiquitin-conjugating enzyme E2W (putative) isoform... 313 4e-86
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 91 3e-19
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 91 3e-19
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 89 1e-18
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 89 2e-18
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 87 8e-18
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 84 7e-17
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 81 4e-16
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 78 4e-15
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 4e-15
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 4e-15
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 4e-15
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 4e-15
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 4e-15
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 78 4e-15
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 78 4e-15
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 77 5e-15
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 77 6e-15
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 77 6e-15
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 75 2e-14
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 72 2e-13
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 72 2e-13
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens] 69 2e-12
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 68 4e-12
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 68 4e-12
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s... 67 7e-12
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 67 9e-12
gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens] 66 1e-11
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 64 4e-11
>gi|47933381 ubiquitin-conjugating enzyme E2W (putative) isoform 1
[Homo sapiens]
Length = 162
Score = 346 bits (887), Expect = 6e-96
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 60
MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY
Sbjct: 1 MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 60
Query: 61 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC 120
EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC
Sbjct: 61 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC 120
Query: 121 LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 162
LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
Sbjct: 121 LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 162
>gi|145301543 ubiquitin-conjugating enzyme E2W (putative) isoform 2
[Homo sapiens]
Length = 151
Score = 313 bits (802), Expect = 4e-86
Identities = 151/162 (93%), Positives = 151/162 (93%), Gaps = 11/162 (6%)
Query: 1 MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 60
MASMQ KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY
Sbjct: 1 MASMQ-----------KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 49
Query: 61 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC 120
EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC
Sbjct: 50 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVC 109
Query: 121 LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 162
LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC
Sbjct: 110 LSIISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHDDTC 151
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 91.3 bits (225), Expect = 3e-19
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+QKEL + DPPP + K ++I +W + G PG++YEG F L FSS YP
Sbjct: 64 KRIQKELAEITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYP 121
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 130
F P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 122 FKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 173
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 91.3 bits (225), Expect = 3e-19
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+QKEL + DPPP + K ++I +W + G PG++YEG F L FSS YP
Sbjct: 64 KRIQKELAEITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYP 121
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 130
F P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 122 FKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 173
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 89.4 bits (220), Expect = 1e-18
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+QKEL + DPPP + K ++I +W + G PG++YEG F L FS YP
Sbjct: 58 KRIQKELAEITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYP 115
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 130
F P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 116 FKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 167
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 88.6 bits (218), Expect = 2e-18
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+QKEL + DPPP + K ++I +W + G PG++YEG F L F+ YP
Sbjct: 50 KRIQKELADITLDPPPNCSAGPKG--DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYP 107
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSC 130
F P+V F H ++ S G ICL IL ++WSPAL++ V LSI S+L+ C
Sbjct: 108 FKPPKVTFRTRIY--HCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC 159
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 86.7 bits (213), Expect = 8e-18
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+QKEL LQ DPP + V + + W + G P + Y+G F L F + YP
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGP--VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P++ FT + HP++ SNG ICL IL WSPAL+V V LSI S+L
Sbjct: 62 FKPPKIAFTTKIY--HPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 83.6 bits (205), Expect = 7e-17
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+QKEL LQ DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRIQKELTDLQRDPPAQCSAGP--VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT + HP++ SNG ICL IL WSPAL+V V LSI S+L
Sbjct: 62 FKPPKVAFTTKIY--HPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 80.9 bits (198), Expect = 4e-16
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
+RL ++ LQ DPP G++ +N+I QW + G GT +E F+L+ +FS YP
Sbjct: 7 RRLMRDFKRLQEDPPVGVS--GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRP 136
P V F + HP+VY++G ICL IL WSP V S+ SI S+L +
Sbjct: 65 NKPPTVRFLSKMF--HPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLD--EPNPNS 120
Query: 137 PDNSFYVRTCNKNPKK 152
P NS + +N ++
Sbjct: 121 PANSQAAQLYQENKRE 136
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.8 bits (190), Expect = 4e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRINKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 77.4 bits (189), Expect = 5e-15
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KR+ KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 4 KRIHKELNDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 62 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 77.0 bits (188), Expect = 6e-15
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KRLQ+EL+ L G++ +S +++ +W+ + GA GT+YE +++L +F S YP
Sbjct: 33 KRLQQELMTLMMSGDKGISAFPES--DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 90
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
+++P V F HP+V + G+ICL IL E WS V+++ LSI S+L
Sbjct: 91 YNAPTVKFL--TPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLL 139
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 77.0 bits (188), Expect = 6e-15
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
+RL ++ LQ DPP G++ +N+I W + G GT +E F+L +F+ YP
Sbjct: 7 RRLMRDFKRLQEDPPAGVS--GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRP 136
P V F + HP+VY++G ICL IL WSP V S+ SI S+L +
Sbjct: 65 NKPPTVRFVSKMF--HPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLD--EPNPNS 120
Query: 137 PDNSFYVRTCNKNPKK 152
P NS + +N ++
Sbjct: 121 PANSQAAQLYQENKRE 136
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 75.5 bits (184), Expect = 2e-14
Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
K L KEL L DPP + V + + W + G + Y+G F L F + YP
Sbjct: 6 KCLSKELSDLARDPPAQCSAGP--VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 63
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 127
F P+V FT HP++ SNG ICL IL WSPAL++ V LSI S+L
Sbjct: 64 FKPPKVAFTTRIY--HPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 112
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 72.4 bits (176), Expect = 2e-13
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 1 MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLY 60
MA Q T + K L EL +LQ +P G + ++ + W V + G P TLY
Sbjct: 1 MAQQQMTSSQ------KALMLELKSLQEEPVEGFRITLVD-ESDLYNWEVAIFGPPNTLY 53
Query: 61 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------T 107
EG F+ KF YP+ P F + HP++Y NG +C+SIL +
Sbjct: 54 EGGYFKAHIKFPIDYPYSPPTFRFLTK--MWHPNIYENGDVCISILHPPVDDPQSGELPS 111
Query: 108 EDWSPALSVQSVCLSIISMLS 128
E W+P +V+++ LS+IS+L+
Sbjct: 112 ERWNPTQNVRTILLSVISLLN 132
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 72.0 bits (175), Expect = 2e-13
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 43 NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHIC 102
++I +W + G PG++YEG F L F+ YPF P+V F H ++ S G IC
Sbjct: 57 DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIY--HCNINSQGVIC 114
Query: 103 LSILTEDWSPALSVQSVCLSIISMLSSC 130
L IL ++WSPAL++ V LSI S+L+ C
Sbjct: 115 LDILKDNWSPALTISKVLLSICSLLTDC 142
>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
Length = 354
Score = 68.9 bits (167), Expect = 2e-12
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 18 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF 77
R++++++++ +PPPGM + +V +T+ + G T YEG F +F+ YP
Sbjct: 103 RIKRDIMSIYKEPPPGMFVVPDTVD--MTKIHALITGPFDTPYEGGFFLFVFRCPPDYPI 160
Query: 78 DSPQV--MFTGEN-IPVHPHVYSNGHICLSIL----TEDWSPALSVQSVCLSIISMLS-- 128
P+V M TG N + +P+ Y NG +CLSIL WSPA S+ SV +SI S+++
Sbjct: 161 HPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTEN 220
Query: 129 ------SCKEKRRPPDNSFY 142
+++R P D+ Y
Sbjct: 221 PYHNEPGFEQERHPGDSKNY 240
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 67.8 bits (164), Expect = 4e-12
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 43 NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHIC 102
+++ +W+ + GA GT+YE +++L +F S YP+++P V F HP+V + G+IC
Sbjct: 18 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL--TPCYHPNVDTQGNIC 75
Query: 103 LSILTEDWSPALSVQSVCLSIISML 127
L IL E WS V+++ LSI S+L
Sbjct: 76 LDILKEKWSALYDVRTILLSIQSLL 100
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 67.8 bits (164), Expect = 4e-12
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 43 NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHIC 102
+++ +W+ + GA GT+YE +++L +F S YP+++P V F HP+V + G+IC
Sbjct: 18 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL--TPCYHPNVDTQGNIC 75
Query: 103 LSILTEDWSPALSVQSVCLSIISML 127
L IL E WS V+++ LSI S+L
Sbjct: 76 LDILKEKWSALYDVRTILLSIQSLL 100
>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
sapiens]
Length = 165
Score = 67.0 bits (162), Expect = 7e-12
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
KRL E L +PP G+ + +N +W + G T +E F + F YP
Sbjct: 7 KRLMAEYKQLTLNPPEGIVAGPMNEENFF-EWEALIMGPEDTCFEFGVFPAILSFPLDYP 65
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQSVCLSI 123
P++ FT E HP++Y +G +C+SIL E WSP SV+ + LS+
Sbjct: 66 LSPPKMRFTCEMF--HPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSV 123
Query: 124 ISMLSSCKEKRRPPDNSFYVRTCNKNPKKTKWWYHD 159
+SML+ P D S N +K W D
Sbjct: 124 VSMLA------EPNDES------GANVDASKMWRDD 147
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 66.6 bits (161), Expect = 9e-12
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 48 WIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILT 107
W + G + Y+G F L F + YPF P+V FT HP++ SNG ICL IL
Sbjct: 4 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY--HPNINSNGSICLDILR 61
Query: 108 EDWSPALSVQSVCLSIISML 127
WSPAL++ V LSI S+L
Sbjct: 62 SQWSPALTISKVLLSICSLL 81
>gi|16357477 ubiquitin-conjugating enzyme Cdc34 [Homo sapiens]
Length = 236
Score = 66.2 bits (160), Expect = 1e-11
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 17 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYP 76
K L EL LQ +P G + + + W V + G P T YEG F+ KF YP
Sbjct: 11 KALLLELKGLQEEPVEGFRVTLVD-EGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYP 69
Query: 77 FDSPQVMFTGENIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQSVCLSI 123
+ P F + HP++Y G +C+SIL +E W+P +V+++ LS+
Sbjct: 70 YSPPAFRFLTK--MWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 127
Query: 124 ISMLS 128
IS+L+
Sbjct: 128 ISLLN 132
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 64.3 bits (155), Expect = 4e-11
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 16 PKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRY 75
P+R+ KE L +P PG + + +++ + V + G + +EG F+L Y
Sbjct: 5 PRRIIKETQRLLAEPVPG--IKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEY 62
Query: 76 PFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSS 129
P +P+V F + HP+V G ICL IL + WSPAL +++V LSI ++LS+
Sbjct: 63 PMAAPKVRFMTKIY--HPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,419,603
Number of Sequences: 37866
Number of extensions: 315020
Number of successful extensions: 954
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 819
Number of HSP's gapped (non-prelim): 86
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.