Search of human proteins with 4758796

Search of human proteins with 4758796

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758796 developmentally regulated GTP binding protein 1
[Homo sapiens]
         (367 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758796 developmentally regulated GTP binding protein 1 [Homo...   735   0.0  
gi|4557537 developmentally regulated GTP binding protein 2 [Homo...   407   e-114
gi|24308117 GTP binding protein 5 [Homo sapiens]                       75   7e-14
gi|111955139 GTP-binding protein 10 isoform 2 [Homo sapiens]           67   2e-11
gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens]           59   5e-09
gi|55953087 G protein-binding protein CRFG [Homo sapiens]              48   1e-05
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)...    39   0.006
gi|58761500 Obg-like ATPase 1 isoform 1 [Homo sapiens]                 39   0.007
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi...    39   0.010
gi|24307899 Era-like 1 [Homo sapiens]                                  38   0.016
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)...    37   0.028
gi|7706359 RAS, dexamethasone-induced 1 [Homo sapiens]                 34   0.24 
gi|223029424 large subunit GTPase 1 [Homo sapiens]                     33   0.53 
gi|157837985 kazrin isoform E [Homo sapiens]                           32   1.2  
gi|63147424 kazrin isoform A [Homo sapiens]                            32   1.2  
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      31   1.5  
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ...    31   1.5  
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ...    31   1.5  
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ...    31   1.5  
gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens]                    31   2.0  
gi|14110375 neighbor of BRCA1 gene 1 [Homo sapiens]                    31   2.0  
gi|14110381 neighbor of BRCA1 gene 1 [Homo sapiens]                    31   2.0  
gi|122937388 MAX gene associated [Homo sapiens]                        30   2.6  
gi|93277113 GTP_binding protein [Homo sapiens]                         30   3.4  
gi|194018511 keratin 77 [Homo sapiens]                                 30   4.5  
gi|21361462 EH-domain containing 2 [Homo sapiens]                      30   4.5  
gi|222446620 hypothetical protein LOC342346 [Homo sapiens]             29   5.8  
gi|5453758 nebulette sarcomeric isoform [Homo sapiens]                 29   5.8  
gi|67003566 F-box protein 48 [Homo sapiens]                            29   5.8  
gi|223633890 hypothetical protein LOC729956 [Homo sapiens]             29   7.6  

>gi|4758796 developmentally regulated GTP binding protein 1 [Homo
           sapiens]
          Length = 367

 Score =  735 bits (1897), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA 60
           MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
Sbjct: 1   MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA 60

Query: 61  KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG 120
           KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
Sbjct: 61  KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG 120

Query: 121 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG 180
           IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
Sbjct: 121 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG 180

Query: 181 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY 240
           FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
Sbjct: 181 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY 240

Query: 241 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG 300
           IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
Sbjct: 241 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG 300

Query: 301 QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED 360
           QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED
Sbjct: 301 QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED 360

Query: 361 VIQIVKK 367
           VIQIVKK
Sbjct: 361 VIQIVKK 367


>gi|4557537 developmentally regulated GTP binding protein 2 [Homo
           sapiens]
          Length = 364

 Score =  407 bits (1047), Expect = e-114
 Identities = 209/363 (57%), Positives = 262/363 (72%), Gaps = 2/363 (0%)

Query: 5   LAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVAKTGD 64
           L KI+EIE E+ARTQKNKAT +HLGLLKA+LAK R +L+ P        GEGFDV K+GD
Sbjct: 4   LEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASS-KGEGFDVMKSGD 62

Query: 65  ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124
           AR+  +GFPSVGKST LS +    SE A+YEFTTLT +PGVI YKGA IQLLDLPGIIEG
Sbjct: 63  ARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEG 122

Query: 125 AKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKK 184
           A  GKGRGRQVIAVART ++I+++LD  K    + ++E ELE  GIRLN   PNI FK K
Sbjct: 123 AAQGKGRGRQVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLNKHKPNIYFKPK 182

Query: 185 DKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVYIPCI 244
             GGI+  +T   ++   + V+ IL EYKI NA+V  R D + D+ IDV+ GNRVY+PC+
Sbjct: 183 KGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVYMPCL 242

Query: 245 YVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKGQLPD 304
           YV NKIDQIS+EE+D + + P+ V IS   + N D LLE +W+YL L  IYTK +GQ PD
Sbjct: 243 YVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRGQRPD 302

Query: 305 YTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDEDVIQI 364
           +T  ++L     +VE  C +IH++L  +FKYALVWG S K++PQ+VG  HT+E EDVIQI
Sbjct: 303 FTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTMEHEDVIQI 361

Query: 365 VKK 367
           VKK
Sbjct: 362 VKK 364


>gi|24308117 GTP binding protein 5 [Homo sapiens]
          Length = 406

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 26/164 (15%)

Query: 48  GGGGGPGEGFDVAKTGDARI-----------------------GFVGFPSVGKSTLLSNL 84
           GG GG G  F +A    A +                       G VGFP+ GKS+LL  +
Sbjct: 185 GGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAI 244

Query: 85  AGVYSEVAAYEFTTLTTVPGVIRYKG-AKIQLLDLPGIIEGAKDGKGRGRQVIAVARTCN 143
           +     VA+Y FTTL    G++ Y+G  +I + D+PGII GA   +G G   +     C 
Sbjct: 245 SNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCR 304

Query: 144 LILIVLDVLKPLGHKKI--IENELEGFGIRLNSKPPNIGFKKKD 185
            +L V+D+ +P    ++  ++ ELE +   L+++P  I   K D
Sbjct: 305 FLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKID 348


>gi|111955139 GTP-binding protein 10 isoform 2 [Homo sapiens]
          Length = 387

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 12/133 (9%)

Query: 65  ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAK-IQLLDLPGIIE 123
           A +G VGFP+ GKS+LLS ++     +A Y FTTL    G I Y   K I + DLPG+IE
Sbjct: 149 ADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIE 208

Query: 124 GAKDGKGRGRQVIAVARTCNLILIVLDV--LKPLGHKK---------IIENELEGFGIRL 172
           GA   KG G + +        +L V+D+   +   H +         ++  ELE +   L
Sbjct: 209 GAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEEL 268

Query: 173 NSKPPNIGFKKKD 185
            +KP  +   K D
Sbjct: 269 QTKPALLAVNKMD 281


>gi|111955063 GTP-binding protein 10 isoform 1 [Homo sapiens]
          Length = 308

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 12/126 (9%)

Query: 72  FPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAK-IQLLDLPGIIEGAKDGKG 130
           FP+ GKS+LLS ++     +A Y FTTL    G I Y   K I + DLPG+IEGA   KG
Sbjct: 77  FPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKG 136

Query: 131 RGRQVIAVARTCNLILIVLDV--LKPLGHKK---------IIENELEGFGIRLNSKPPNI 179
            G + +        +L V+D+   +   H +         ++  ELE +   L +KP  +
Sbjct: 137 MGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALL 196

Query: 180 GFKKKD 185
              K D
Sbjct: 197 AVNKMD 202


>gi|55953087 G protein-binding protein CRFG [Homo sapiens]
          Length = 634

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 71  GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKG 130
           G+P+VGKS+ ++ +     +V  Y FTT +   G + YK  + Q++D PGI++   + + 
Sbjct: 175 GYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRN 234

Query: 131 --RGRQVIAVARTCNLILIVLDVLKPLGH 157
               + + A+A     +L V+D+ +  GH
Sbjct: 235 TIEMQAITALAHLRAAVLYVMDLSEQCGH 263


>gi|9506611 guanine nucleotide binding protein-like 3
           (nucleolar)-like [Homo sapiens]
          Length = 582

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 18/95 (18%)

Query: 66  RIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIR-----YKGAKIQLLDLPG 120
           R+G VG P+VGKS+L+++L             ++  VPG+ +     Y    I+LLD PG
Sbjct: 254 RVGVVGLPNVGKSSLINSL-------KRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPG 306

Query: 121 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPL 155
           I+ G         +V  + R C  +  + D + P+
Sbjct: 307 IVPGPNS------EVGTILRNCVHVQKLADPVTPV 335


>gi|58761500 Obg-like ATPase 1 isoform 1 [Homo sapiens]
          Length = 396

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 21/118 (17%)

Query: 45  PKGGGGGGPGEGFDVAKTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPG 104
           PK GG G              +IG VG P+VGKST  + L    S+ +A  F   T  P 
Sbjct: 3   PKKGGDGIKPPPIIGRFGTSLKIGIVGLPNVGKSTFFNVLTN--SQASAENFPFCTIDPN 60

Query: 105 VIR--------------YKGAK-----IQLLDLPGIIEGAKDGKGRGRQVIAVARTCN 143
             R              +K A      + ++D+ G+++GA +G+G G   ++    C+
Sbjct: 61  ESRVPVPDERFDFLCQYHKPASKIPAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACD 118


>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
           sapiens]
          Length = 607

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)

Query: 61  KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRY-----KGAKIQL 115
           K G   IG VGFP+VGKS+L++ L G        +  +++  PG  RY         ++L
Sbjct: 357 KDGVVTIGCVGFPNVGKSSLINGLVG-------RKVVSVSRTPGHTRYFQTYFLTPSVKL 409

Query: 116 LDLPGII 122
            D PG+I
Sbjct: 410 CDCPGLI 416


>gi|24307899 Era-like 1 [Homo sapiens]
          Length = 437

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 66  RIGFVGFPSVGKSTLLSNLAG-VYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEG 124
           R+  +G P+ GKSTL + L G     V+    TT     GVI  K  ++ LLD PGII  
Sbjct: 115 RVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISP 174

Query: 125 AK 126
            K
Sbjct: 175 GK 176


>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
           [Homo sapiens]
          Length = 731

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 18/71 (25%)

Query: 67  IGFVGFPSVGKSTLLS--------NLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDL 118
           +GF+G+P+VGKS++++        N+A +  E   +++ TL            +I L+D 
Sbjct: 313 VGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLM----------RRIFLIDC 362

Query: 119 PGIIEGAKDGK 129
           PG++  ++D +
Sbjct: 363 PGVVYPSEDSE 373


>gi|7706359 RAS, dexamethasone-induced 1 [Homo sapiens]
          Length = 281

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 16/59 (27%), Positives = 30/59 (50%)

Query: 1   MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDV 59
           M   L  +A++ +EM+     K +  +  +L  +  + ++ L    GGGGG PG+ F +
Sbjct: 187 MFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDPGDAFGI 245


>gi|223029424 large subunit GTPase 1 [Homo sapiens]
          Length = 658

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 27/121 (22%)

Query: 9   AEIEAEMARTQKNKATAHHLGLL-KARLAKLRRELITPKGGGGGGPGEGFDVAKTGDARI 67
           A+ EA   +T + +   +   L+ K  L +L +EL T +              K G   +
Sbjct: 342 ADSEARSRKTPQKRQIHNFSHLVSKQELLELFKELHTGRK------------VKDGQLTV 389

Query: 68  GFVGFPSVGKSTLLSNLAGVYS-EVAA-----YEFTTLTTVPGVIRYKGAKIQLLDLPGI 121
           G VG+P+VGKS+ ++ + G     V+A       F TL   PG+         L D PG+
Sbjct: 390 GLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLC--------LCDCPGL 441

Query: 122 I 122
           +
Sbjct: 442 V 442


>gi|157837985 kazrin isoform E [Homo sapiens]
          Length = 775

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 31 LKARLAKLRRELITPKGGGGGGPGEG--FDVAKTGDARIGFVGFPSVGKSTLL 81
          L+A L    R L    GGGG GPG G     +  GD+    +  P +G   LL
Sbjct: 26 LRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENPQLGAQVLL 78


>gi|63147424 kazrin isoform A [Homo sapiens]
          Length = 421

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 31 LKARLAKLRRELITPKGGGGGGPGEG--FDVAKTGDARIGFVGFPSVGKSTLL 81
          L+A L    R L    GGGG GPG G     +  GD+    +  P +G   LL
Sbjct: 26 LRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENPQLGAQVLL 78


>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1723

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)

Query: 279 DDLLEKIWDYLKLVRIYTKPKGQLPDYTSPV 309
           DDL E+++DY+ L+    + KG LP + +P+
Sbjct: 324 DDLREQVYDYIPLLLAEYQGKGHLPPFANPL 354


>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
           [Homo sapiens]
          Length = 537

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 56  GFDVAKTGDARIGFVGFPSVGKSTLLSNL 84
           GF    +   R+G +GFP+VGKS+++++L
Sbjct: 234 GFQETCSKAIRVGVIGFPNVGKSSIINSL 262


>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
           [Homo sapiens]
          Length = 537

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 56  GFDVAKTGDARIGFVGFPSVGKSTLLSNL 84
           GF    +   R+G +GFP+VGKS+++++L
Sbjct: 234 GFQETCSKAIRVGVIGFPNVGKSSIINSL 262


>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
           [Homo sapiens]
          Length = 549

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 56  GFDVAKTGDARIGFVGFPSVGKSTLLSNL 84
           GF    +   R+G +GFP+VGKS+++++L
Sbjct: 246 GFQETCSKAIRVGVIGFPNVGKSSIINSL 274


>gi|14110378 neighbor of BRCA1 gene 1 [Homo sapiens]
          Length = 966

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 194 TCPQSELDAETVKSILAEYKIHNADVTLRSDATA----DDLIDVVEGNRVYIPCIYVLNK 249
           TC Q E        +LA+ +    +VT +++ TA        +V     +YIP + +L  
Sbjct: 504 TCQQEET------FLLAKEERQLGEVTEQTEGTAACIPQKAKNVASERELYIPSVDLLTA 557

Query: 250 IDQISIEELDI-----IYKVPHCVPI 270
            D +S E LDI     + +VPH  P+
Sbjct: 558 QDLLSFELLDINIVQELERVPHNTPV 583


>gi|14110375 neighbor of BRCA1 gene 1 [Homo sapiens]
          Length = 966

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 194 TCPQSELDAETVKSILAEYKIHNADVTLRSDATA----DDLIDVVEGNRVYIPCIYVLNK 249
           TC Q E        +LA+ +    +VT +++ TA        +V     +YIP + +L  
Sbjct: 504 TCQQEET------FLLAKEERQLGEVTEQTEGTAACIPQKAKNVASERELYIPSVDLLTA 557

Query: 250 IDQISIEELDI-----IYKVPHCVPI 270
            D +S E LDI     + +VPH  P+
Sbjct: 558 QDLLSFELLDINIVQELERVPHNTPV 583


>gi|14110381 neighbor of BRCA1 gene 1 [Homo sapiens]
          Length = 966

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 194 TCPQSELDAETVKSILAEYKIHNADVTLRSDATA----DDLIDVVEGNRVYIPCIYVLNK 249
           TC Q E        +LA+ +    +VT +++ TA        +V     +YIP + +L  
Sbjct: 504 TCQQEET------FLLAKEERQLGEVTEQTEGTAACIPQKAKNVASERELYIPSVDLLTA 557

Query: 250 IDQISIEELDI-----IYKVPHCVPI 270
            D +S E LDI     + +VPH  P+
Sbjct: 558 QDLLSFELLDINIVQELERVPHNTPV 583


>gi|122937388 MAX gene associated [Homo sapiens]
          Length = 3114

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 139 ARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKG 187
           AR   L   +++ LK L HK++I   L+  G++LNS  P +    K  G
Sbjct: 701 ARISQLEKELIEDLKTLRHKQVIHPGLQEVGLKLNSVDPTMSIDLKYLG 749


>gi|93277113 GTP_binding protein [Homo sapiens]
          Length = 334

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 10/61 (16%)

Query: 70  VGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQ--------LLDLPGI 121
           +G P+VGKS+L+++L      +   + T +   PG+ R   +KIQ        LLD PG+
Sbjct: 149 IGVPNVGKSSLINSLR--RQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPGV 206

Query: 122 I 122
           +
Sbjct: 207 L 207


>gi|194018511 keratin 77 [Homo sapiens]
          Length = 578

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/40 (42%), Positives = 17/40 (42%)

Query: 47  GGGGGGPGEGFDVAKTGDARIGFVGFPSVGKSTLLSNLAG 86
           G GG G G GF V  TG    G  GF   G  T    L G
Sbjct: 87  GVGGFGGGRGFGVGSTGAGGFGGGGFGGAGFGTSNFGLGG 126


>gi|21361462 EH-domain containing 2 [Homo sapiens]
          Length = 543

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 113 IQLLDLPGIIEGAKDGKGRGRQVIAV----ARTCNLILIVLDVLK 153
           I ++D PGI+ GAK    RG    AV    A   +LI+++ D  K
Sbjct: 149 ISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHK 193


>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
          Length = 1141

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 103  PGVIRYKGAKIQLLDLPGIIEGAKDGKGRGRQVIAVAR 140
            P VI Y  A++ +L + GI+   +    RG Q +AVA+
Sbjct: 1002 PHVIDYDSAEVDILGVDGILYKGRVNSQRGAQPLAVAK 1039


>gi|5453758 nebulette sarcomeric isoform [Homo sapiens]
          Length = 1014

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 131 RGRQVIAVARTCNLILI--VLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKK 184
           +GR  + + +T   + +  + ++L+   +KK +ENE++G G+ LNS+  +I   K+
Sbjct: 384 KGRSSLDLDKTPEFLHVKYITNLLREKEYKKDLENEIKGKGMELNSEVLDIQRAKR 439


>gi|67003566 F-box protein 48 [Homo sapiens]
          Length = 155

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)

Query: 254 SIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDY-LKLVRIYTKPK-------GQLPDY 305
           +I   D ++K PHC+ + A  R   DD LE  + + + L+R Y K K       G+  + 
Sbjct: 68  TIRNSDSLWK-PHCMTVRAVCRREIDDDLESGYSWRVILLRNYQKSKVKHEWLSGRYSNI 126

Query: 306 TSPVVLP 312
            SP+ LP
Sbjct: 127 CSPISLP 133


>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
          Length = 538

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 13 AEMARTQKNKAT-AHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVAKTGDA 65
          A  AR + + AT A   G L A LA LRR L     GGGG    G +  +TG A
Sbjct: 14 AGQARARPSNATSAEPAGPLPALLAHLRR-LTGALTGGGGAASPGANGTRTGPA 66


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.139    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,687,848
Number of Sequences: 37866
Number of extensions: 618662
Number of successful extensions: 2714
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2666
Number of HSP's gapped (non-prelim): 47
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.