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Search of human proteins with 47578111
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47578111 hypothetical protein LOC140699 isoform 2 [Homo
sapiens]
(608 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47578111 hypothetical protein LOC140699 isoform 2 [Homo sapiens] 1201 0.0
gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo sapi... 1196 0.0
gi|47578113 hypothetical protein LOC140699 isoform 3 [Homo sapiens] 1111 0.0
gi|223278410 hypothetical protein LOC374977 [Homo sapiens] 151 1e-36
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5... 133 5e-31
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 133 5e-31
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 111 2e-24
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 92 1e-18
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 91 2e-18
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 90 5e-18
gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 83 6e-16
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 32 2.2
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 2.2
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 32 2.2
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 31 2.9
gi|28626504 fermitin family homolog 3 short form [Homo sapiens] 31 3.8
gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens] 31 3.8
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 31 3.8
gi|7662655 SBBI31 protein [Homo sapiens] 31 3.8
gi|153792074 proline rich 12 [Homo sapiens] 31 3.8
gi|76563908 hypothetical protein LOC169436 [Homo sapiens] 30 4.9
gi|239746217 PREDICTED: zinc finger protein 66 [Homo sapiens] 30 4.9
gi|188536004 zinc finger protein 469 [Homo sapiens] 30 4.9
gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens] 30 6.5
gi|148806881 hypothetical protein LOC57608 [Homo sapiens] 30 6.5
gi|148886716 downstream of Stk11 [Homo sapiens] 30 6.5
gi|105990532 apolipoprotein B precursor [Homo sapiens] 30 8.4
gi|51873064 mannosidase, alpha, class 2B, member 1 precursor [Ho... 30 8.4
gi|11342664 myxovirus resistance protein 2 [Homo sapiens] 30 8.4
>gi|47578111 hypothetical protein LOC140699 isoform 2 [Homo sapiens]
Length = 608
Score = 1201 bits (3108), Expect = 0.0
Identities = 608/608 (100%), Positives = 608/608 (100%)
Query: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60
MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES
Sbjct: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60
Query: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120
EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL
Sbjct: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120
Query: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180
SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF
Sbjct: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180
Query: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240
NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS
Sbjct: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240
Query: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300
MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT
Sbjct: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300
Query: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360
ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC
Sbjct: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360
Query: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420
LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK
Sbjct: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420
Query: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480
DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL
Sbjct: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480
Query: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540
KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR
Sbjct: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540
Query: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600
PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA
Sbjct: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600
Query: 601 YVAVAVSP 608
YVAVAVSP
Sbjct: 601 YVAVAVSP 608
>gi|194595501 hypothetical protein LOC140699 isoform 1 [Homo
sapiens]
Length = 1052
Score = 1196 bits (3094), Expect = 0.0
Identities = 605/607 (99%), Positives = 606/607 (99%)
Query: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60
MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES
Sbjct: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60
Query: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120
EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL
Sbjct: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120
Query: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180
SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF
Sbjct: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180
Query: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240
NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS
Sbjct: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240
Query: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300
MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT
Sbjct: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300
Query: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360
ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC
Sbjct: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360
Query: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420
LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK
Sbjct: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420
Query: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480
DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL
Sbjct: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480
Query: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540
KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR
Sbjct: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540
Query: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600
PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA
Sbjct: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600
Query: 601 YVAVAVS 607
YVAVA +
Sbjct: 601 YVAVAAT 607
>gi|47578113 hypothetical protein LOC140699 isoform 3 [Homo sapiens]
Length = 573
Score = 1111 bits (2874), Expect = 0.0
Identities = 572/608 (94%), Positives = 572/608 (94%), Gaps = 35/608 (5%)
Query: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60
MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES
Sbjct: 1 MPLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPES 60
Query: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120
EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL
Sbjct: 61 EPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVDLEL 120
Query: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180
SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF
Sbjct: 121 SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEKLIQSIQKVF 180
Query: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240
NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS
Sbjct: 181 NGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSS 240
Query: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300
MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT
Sbjct: 241 MRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNT 300
Query: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKC 360
ECLYRQTFQAFSEMLQSLVVKDPHLENLDTII
Sbjct: 301 ECLYRQTFQAFSEMLQSLVVKDPHLENLDTII---------------------------- 332
Query: 361 LSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 420
KLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK
Sbjct: 333 -------KLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKK 385
Query: 421 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTL 480
DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLK L
Sbjct: 386 DQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKNL 445
Query: 481 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 540
KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR
Sbjct: 446 KHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISR 505
Query: 541 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 600
PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA
Sbjct: 506 PKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMA 565
Query: 601 YVAVAVSP 608
YVAVAVSP
Sbjct: 566 YVAVAVSP 573
>gi|223278410 hypothetical protein LOC374977 [Homo sapiens]
Length = 1323
Score = 151 bits (382), Expect = 1e-36
Identities = 113/355 (31%), Positives = 181/355 (50%), Gaps = 19/355 (5%)
Query: 229 VQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQ 288
+QEE SLSSS+R++ + LS+ LG +R+EL ++ + S+ +LPSV+ + +
Sbjct: 466 IQEEPLDSLSSSVRKQAMEILTQLSHTQP--TLGMRERSELVNVCVHSVFSLPSVQAMQE 523
Query: 289 IQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERE 348
E + LY QT +A +L++L ++DP L +I++ L PW+ S K HER
Sbjct: 524 KDEAKAE---TIQALYHQTLEALQTLLKALFIEDPTPAGLKSILEALGPWMNSGKAHERA 580
Query: 349 RATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHI 408
RA + VL + L +PL F LG L+ + L GDP E++ EA +GI +L+
Sbjct: 581 RAVNTNVSVLNHMLLTLPFFMPLGFPALGLLLGRLILHIGDPDEEIGCEALDGI-IILYT 639
Query: 409 TLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQ 468
L L+ D K++ N K + FL ++ + C R+ + F FL ++
Sbjct: 640 ILELQKRARD-KEETNKKELYESNKHFLGPYNPVSPC--QNILRVIEEFGDFLGPQQIKD 696
Query: 469 FIMTTFDTLKTLKHPC------IQRSAGELLLT--LAKNTESQFEKVPEIMGVICAQLSI 520
++ + LK + + A E++L+ L E +PEIM I QLS
Sbjct: 697 LLLAALEGLKGSSEAPGKDSREMMQLASEVMLSSVLEWYRHRALEVIPEIMQGIYMQLSH 756
Query: 521 ISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPS 575
I +PR RQ + VSL S T++V++ L+C P+P N + AE+WR L + PS
Sbjct: 757 IQEPRARQVALLPVSLLAS-SFMTEVVVALLMC-PLPLNSNGAEMWRQLILCKPS 809
>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
[Homo sapiens]
Length = 1218
Score = 133 bits (334), Expect = 5e-31
Identities = 111/420 (26%), Positives = 203/420 (48%), Gaps = 18/420 (4%)
Query: 183 ELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMR 242
E K KL + + +S+A+ A SF + A++V + ++ E P SL + +R
Sbjct: 359 ETKDPALKLCLVQSVCMVSRAICSSTQAGSFHFTRKAELVAQMMEFIRAEPPDSLRTPIR 418
Query: 243 QEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNTEC 302
++ +T L V L + RA++ + SI+ L L + +E +G C +
Sbjct: 419 KKAMLTCTYLV--SVEPALDEQARADVIHGCLHSIMAL-----LPEPKE--EDGGCQ-KS 468
Query: 303 LYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKCLS 362
LY +T A ++L SL+ ++ + L +I+HL PW++S + HER RA A +L+
Sbjct: 469 LYLETLHALEDLLTSLLQRNMTPQGLQIMIEHLSPWIKSPRGHERARALGLSALLLRYFL 528
Query: 363 KHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQ 422
+HL + + F LG L+ L + C D +EA + ++SLL++ L + + D +D
Sbjct: 529 EHLRVSALVPFHNLGLLIGLFSPRCADLWPATRQEAVDCVYSLLYLQLGYEGFSRDYRD- 587
Query: 423 QNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTLKH 482
++ L ++ L +H A F+ C + Q+ L ++L ++T F+ L +
Sbjct: 588 -DVAERLLSLKDGL-VHPDPAILFHTC-HSVGQIIAKRLPPDQLISLLLTMFEALGDPEK 644
Query: 483 PCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISRPK 542
C + + + L + EKVPEI+ V+ ++L V ++V L + +
Sbjct: 645 NCSRAATVMINCLLQERGGVLQEKVPEIVSVLRSKLQEAQGEHVLPAAQHSVYLLAT--Q 702
Query: 543 YTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMAYV 602
+ V+S LL P+P + H +WR L+VE +L LL K+ + + P +E A++
Sbjct: 703 HCAAVVSSLLGSPLPLDSHTCMLWRALAVEPRLAAQVLGLLLEKMSR--DVPFKESRAFL 760
>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
Length = 1641
Score = 133 bits (334), Expect = 5e-31
Identities = 111/420 (26%), Positives = 203/420 (48%), Gaps = 18/420 (4%)
Query: 183 ELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMR 242
E K KL + + +S+A+ A SF + A++V + ++ E P SL + +R
Sbjct: 782 ETKDPALKLCLVQSVCMVSRAICSSTQAGSFHFTRKAELVAQMMEFIRAEPPDSLRTPIR 841
Query: 243 QEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNTEC 302
++ +T L V L + RA++ + SI+ L L + +E +G C +
Sbjct: 842 KKAMLTCTYLV--SVEPALDEQARADVIHGCLHSIMAL-----LPEPKE--EDGGCQ-KS 891
Query: 303 LYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKCLS 362
LY +T A ++L SL+ ++ + L +I+HL PW++S + HER RA A +L+
Sbjct: 892 LYLETLHALEDLLTSLLQRNMTPQGLQIMIEHLSPWIKSPRGHERARALGLSALLLRYFL 951
Query: 363 KHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQ 422
+HL + + F LG L+ L + C D +EA + ++SLL++ L + + D +D
Sbjct: 952 EHLRVSALVPFHNLGLLIGLFSPRCADLWPATRQEAVDCVYSLLYLQLGYEGFSRDYRD- 1010
Query: 423 QNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTLKH 482
++ L ++ L +H A F+ C + Q+ L ++L ++T F+ L +
Sbjct: 1011 -DVAERLLSLKDGL-VHPDPAILFHTC-HSVGQIIAKRLPPDQLISLLLTMFEALGDPEK 1067
Query: 483 PCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISRPK 542
C + + + L + EKVPEI+ V+ ++L V ++V L + +
Sbjct: 1068 NCSRAATVMINCLLQERGGVLQEKVPEIVSVLRSKLQEAQGEHVLPAAQHSVYLLAT--Q 1125
Query: 543 YTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMAYV 602
+ V+S LL P+P + H +WR L+VE +L LL K+ + + P +E A++
Sbjct: 1126 HCAAVVSSLLGSPLPLDSHTCMLWRALAVEPRLAAQVLGLLLEKMSR--DVPFKESRAFL 1183
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 111 bits (278), Expect = 2e-24
Identities = 110/470 (23%), Positives = 199/470 (42%), Gaps = 61/470 (12%)
Query: 169 VEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIVHTLNVL 228
V+ ++ + F+ E K FL L A+ E A S+ ++++ L VL
Sbjct: 398 VDNIVSRMVFYFHYSSWDETLKQSFLTATLMLMGAVSRSEGAHSYEFFQTSELLQCLMVL 457
Query: 229 VQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQ 288
+++E +L + RQ+ + L + + E +++L S +S+ LP + L +
Sbjct: 458 MEKEPQDTLCTRSRQQAMHIASSLC--KLRPPIDLERKSQLLSTCFRSVFALPLLDALEK 515
Query: 289 IQEIM---PNGTC-------------------------NTECLYRQTFQAFSEMLQSLVV 320
+ PN + + LY +T +A MLQSL++
Sbjct: 516 HTCLFLEPPNIQLWPVARERAGWTHQGWGPRAVLHCSEHLQSLYSRTMEALDFMLQSLIM 575
Query: 321 KDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLV 380
++P + L ++ HL WL S K HER+RA S +LK L+ + L F+R+G LV
Sbjct: 576 QNPTADELHFLLSHLYIWLASEKAHERQRAVHSCMILLKFLNHNGYLDPKEDFKRIGQLV 635
Query: 381 ALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHS 440
++ +LC DP + EG L + + K + L+ +E + HS
Sbjct: 636 GILGMLCQDPDRATQRCSLEGASHLYQLLM-------CHKTGEALQAESQAPKELSQAHS 688
Query: 441 SAA---------------------KCFYNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKT 479
A F C F++ + L EL I T D L +
Sbjct: 689 DGAPLWNSRDQKATPLGPQEMAKNHIFQLCSFQVIKDIMQQLTLAELSDLIWTAIDGLGS 748
Query: 480 LKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFIS 539
P ++A E+LLT + ++ E V + I +L + P+ +++ ++ ++L ++
Sbjct: 749 TS-PFRVQAASEMLLTAVQEHGAKLEIVSSMAQAIRLRLCSVHIPQAKEKTLHAITL-LA 806
Query: 540 RPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQK 589
R ++V +FL +P + H ++WR L P++ +L LL LQ+
Sbjct: 807 RSHTCELVATFLNI-SIPLDSHTFQLWRALGAGQPTSHLVLTTLLACLQE 855
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 92.0 bits (227), Expect = 1e-18
Identities = 85/426 (19%), Positives = 183/426 (42%), Gaps = 28/426 (6%)
Query: 163 PLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIV 222
P++ I+ + S Q + K+ F+ + +++A+ + + F + +
Sbjct: 832 PITAKIIHHYVSSCQDI--------CLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLT 883
Query: 223 HTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPS 282
+ +++ E +L S +R ++ LS + +E+ +EL ++I S+I+L
Sbjct: 884 SIIVAVIKAEPTDNLVSPVRALAMEALSHLS--KLKPFYSTEENSELMDISIHSVISL-- 939
Query: 283 VRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSV 342
++ + + LY + ++++SL+ + + L +++ L W+ S
Sbjct: 940 --------QLPGEDNESIKTLYANALSSLEQLMESLLQRQLDPKGLQEMVQLLEKWILSE 991
Query: 343 KDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGI 402
K+ ERE+A + +++ + + L+ + G +V L+A D ++ + +
Sbjct: 992 KEWEREKAVSLHLYLMRIYVHSTAVCIHLKLGQFGTMVGLIAPCTCDAHQRTRMASMNVL 1051
Query: 403 HSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLD 462
SLL + Q+ L+ KC+ +L S+ + + RIA+V
Sbjct: 1052 SSLLDLHASQTCSLWGPSKQKELE----KCKG--DLQSTDVEKIFCASSRIAKVVCMEFS 1105
Query: 463 SNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIIS 522
+E+ I + + + S + L + +KV EI+ I L ++
Sbjct: 1106 CDEVVSLIQKLCENTGAMNLQHDKASVTWIAFFLQMRAKELEDKVAEILSAILVHLPVVD 1165
Query: 523 QPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWR 582
P VR+ +I+ + L + + +L+ LL P+P HLAEVW +S +P +L
Sbjct: 1166 HPEVRRLLIDGILLLAHH--HQETILTSLLRQPLPMESHLAEVWLAVSENVPFARTMLHS 1223
Query: 583 LLRKLQ 588
L+ +LQ
Sbjct: 1224 LMGRLQ 1229
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 91.3 bits (225), Expect = 2e-18
Identities = 85/426 (19%), Positives = 183/426 (42%), Gaps = 28/426 (6%)
Query: 163 PLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIV 222
P++ I+ + S Q + K+ F+ + +++A+ + + F + +
Sbjct: 835 PITAKIIHHYVSSCQDI--------CLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLT 886
Query: 223 HTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPS 282
+ +++ E +L S +R ++ LS + +E+ +EL ++I S+I+L
Sbjct: 887 SIIVAVIKAEPTDNLVSPVRALAMEALSHLS--KLKPFYSTEENSELMDISIHSVISL-- 942
Query: 283 VRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSV 342
++ + + LY + ++++SL+ + + L +++ L W+ S
Sbjct: 943 --------QLPGEDNESIKTLYANALSSLEQLMESLLQRQLDPKGLQEMVQLLEKWILSE 994
Query: 343 KDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGI 402
K+ ERE+A + +++ + + L+ + G +V L+A D ++ + +
Sbjct: 995 KEWEREKAVSLHLYLMRIYVHSTAVCIHLKLGQFGTMVGLIAPCTCDAHQRTRMASMNVL 1054
Query: 403 HSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLD 462
SLL + Q+ L+ KC+ +L S+ + + RIA+V
Sbjct: 1055 SSLLDLHASQTCSLWGPSKQKELE----KCKG--DLQSTDVEKIFCASSRIAKVVCMEFS 1108
Query: 463 SNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIIS 522
+E+ I + + + S + L + +KV EI+ I L ++
Sbjct: 1109 CDEVVSLIQKLCENTGAMNLQHDKASVTWIASFLQMRAKELEDKVAEILSAILVHLPVVD 1168
Query: 523 QPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWR 582
P VR+ +I+ + L + + +L+ LL P+P HLAEVW +S +P +L
Sbjct: 1169 HPEVRRLLIDGILLLAHH--HQETILTSLLRQPLPMESHLAEVWLAVSENVPFARTMLHS 1226
Query: 583 LLRKLQ 588
L+ +LQ
Sbjct: 1227 LMGRLQ 1232
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 90.1 bits (222), Expect = 5e-18
Identities = 86/426 (20%), Positives = 182/426 (42%), Gaps = 28/426 (6%)
Query: 163 PLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHSHIADIV 222
P++ I+ + S Q + K+ F+ + +++A+ + + F + +
Sbjct: 832 PITAKIIHHYVSSCQDI--------CLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLT 883
Query: 223 HTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPS 282
+ +++ E +L S +R ++ LS + +E+ +EL ++I S+I+L
Sbjct: 884 SIIVAVIKAEPTDNLVSPVRALAMEALSHLS--KLKPFYSTEENSELMDISIHSVISL-- 939
Query: 283 VRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSV 342
++ + + LY + ++++SL+ + + L +++ L W+ S
Sbjct: 940 --------QLPGEDNESIKTLYANALSSLEQLMESLLQRQLDPKGLQEMVQLLEKWILSE 991
Query: 343 KDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGI 402
K+ ERE+A + ++ + + L+ + G +V L+A D ++ + +
Sbjct: 992 KEWEREKAVSLHLYLMWIYVHSTAVCIHLKLGQFGTMVGLIAPCTCDAHQRTRMASMNVL 1051
Query: 403 HSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLD 462
SLL + Q+ L+ KC+ +L S+ + + RIA+V
Sbjct: 1052 SSLLDLHASQTCSLWGPSKQKELE----KCKG--DLQSTDVEKIFCASSRIAKVVCMEFS 1105
Query: 463 SNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIIS 522
+E+ I + + + S + L + +KV EI+ I L ++
Sbjct: 1106 CDEVVSLIQKLCENTGAMNLQHDKASVTWIAFFLQMRAKELEDKVAEILSAILVHLPVVD 1165
Query: 523 QPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWR 582
P VR+ +I+ + L + T +L+ LL P+P HLAEVW +S +P +L
Sbjct: 1166 HPEVRRLLIDGILLLAHHHQET--ILTSLLRQPLPMESHLAEVWLAVSENVPFARTMLHS 1223
Query: 583 LLRKLQ 588
L+ +LQ
Sbjct: 1224 LMGRLQ 1229
>gi|154240671 HEAT repeat family member 7B2 [Homo sapiens]
Length = 1585
Score = 83.2 bits (204), Expect = 6e-16
Identities = 89/384 (23%), Positives = 179/384 (46%), Gaps = 27/384 (7%)
Query: 207 DETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDR 266
D + F S+ ++ + +++E SL+S +R + + I LS L L +D
Sbjct: 768 DAEDQGFQFSYKEMLIGYMLDFIRDEPLDSLASPIRWKALIAIRYLSKLKPQLSL--QDH 825
Query: 267 AELFSLTIKSIITLPSVRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLE 326
+ I+ ++ LP + L + + + + LY ++ A ++L++++ + + E
Sbjct: 826 LNILEENIRRLLPLPPLENLKSEGQTDKDKE-HIQFLYERSMDALGKLLKTMMWDNVNAE 884
Query: 327 NLDTIIKHLVPWLQSVKDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALL 386
+ + L WL S K+ ERERA A+VL +++ P F ++G L+ L+A
Sbjct: 885 DCQEMFNLLQMWLVSQKEWERERAFQITAKVLT-----NDIEAPENF-KIGSLLGLLAPH 938
Query: 387 CGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCF 446
D + + AA L +I K I + + Q L+ L +++ S+
Sbjct: 939 SCDTLPTIRQAAASSTIGLFYI----KGIHLEVERLQGLQEGLESDDVQVQIKISS---- 990
Query: 447 YNCPFRIAQVFEGFLDSNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTESQFE- 505
+IA++ F+ + E+ F+ D L++L +P ++ G ++T+ K + E
Sbjct: 991 -----KIAKIVSKFIPNEEILMFLEEMLDGLESL-NPTCTKACGIWMITVLKQQGAALED 1044
Query: 506 KVPEIMGVICAQLSIISQPRVR-QQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAE 564
++ EI+G I + ++ Q Q I+ +S S + D V+ LL P+P++R
Sbjct: 1045 QLLEILGTIYHHMPVLRQKEESFQFILEAISQIAS--FHMDTVVVNLLQKPLPFDRDTKT 1102
Query: 565 VWRMLSVELPSTTWILWRLLRKLQ 588
+W+ L+ + S+ +L L+ KL+
Sbjct: 1103 LWKALAEKPASSGKLLQALIDKLE 1126
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform
4 [Homo sapiens]
Length = 3321
Score = 31.6 bits (70), Expect = 2.2
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 303 LYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVK----------DHERERATA 352
L++QT + L L HLE + +++ ++ W++ K + R
Sbjct: 31 LHQQTIRQAENRLSKLNQAASHLEEYNEMLELILKWIEKAKVLAHGTIAWNSASQLREQY 90
Query: 353 SMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDP-QEKVAEEAAEGIHSLLHITLR 411
+ Q L SK ++ +L ++L +L ++ C + ++VAE E I +R
Sbjct: 91 ILHQTLLEESKEIDSELEAMTEKLQYLT---SVYCTEKMSQQVAELGRETEELRQMIKIR 147
Query: 412 LKYITHDKKDQQNLKRALTKCREFLE 437
L+ + KD + + L K + LE
Sbjct: 148 LQNLQDAAKDMKKFEAELKKLQAALE 173
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 31.6 bits (70), Expect = 2.2
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 303 LYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVK----------DHERERATA 352
L++QT + L L HLE + +++ ++ W++ K + R
Sbjct: 5436 LHQQTIRQAENRLSKLNQAASHLEEYNEMLELILKWIEKAKVLAHGTIAWNSASQLREQY 5495
Query: 353 SMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDP-QEKVAEEAAEGIHSLLHITLR 411
+ Q L SK ++ +L ++L +L ++ C + ++VAE E I +R
Sbjct: 5496 ILHQTLLEESKEIDSELEAMTEKLQYLT---SVYCTEKMSQQVAELGRETEELRQMIKIR 5552
Query: 412 LKYITHDKKDQQNLKRALTKCREFLE 437
L+ + KD + + L K + LE
Sbjct: 5553 LQNLQDAAKDMKKFEAELKKLQAALE 5578
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 31.6 bits (70), Expect = 2.2
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 303 LYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVK----------DHERERATA 352
L++QT + L L HLE + +++ ++ W++ K + R
Sbjct: 5507 LHQQTIRQAENRLSKLNQAASHLEEYNEMLELILKWIEKAKVLAHGTIAWNSASQLREQY 5566
Query: 353 SMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDP-QEKVAEEAAEGIHSLLHITLR 411
+ Q L SK ++ +L ++L +L ++ C + ++VAE E I +R
Sbjct: 5567 ILHQTLLEESKEIDSELEAMTEKLQYLT---SVYCTEKMSQQVAELGRETEELRQMIKIR 5623
Query: 412 LKYITHDKKDQQNLKRALTKCREFLE 437
L+ + KD + + L K + LE
Sbjct: 5624 LQNLQDAAKDMKKFEAELKKLQAALE 5649
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 31.2 bits (69), Expect = 2.9
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 3 LSRRGRGSRLAGSRAATSNLPR------ATALSPKSAGRGALSISHAQLLTRRRHSSEQV 56
L RGRG G A L + L + A G L+ HA +L + E +
Sbjct: 731 LGGRGRGGGTRGGGGAVRALVQQQVGGVGEGLGAERAAEGPLARVHALVLPQVGALREAL 790
Query: 57 PPESEPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICS 99
P +S P G + A+RARM ++ +C+
Sbjct: 791 PADSTGVGPLAGVHVAVAPQAGRVLEGLGAVRARMKARRPVCT 833
>gi|28626504 fermitin family homolog 3 short form [Homo sapiens]
Length = 663
Score = 30.8 bits (68), Expect = 3.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 95 HRICSQEEVVIPCAYDSDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHS 154
+++ EV P D + +D+ LSNLE+ +GS+ ++ D + IP L
Sbjct: 302 NKLSQSGEVGEPAGTDPGLDDLDVALSNLEVKLEGSAPTDVLD-SLTTIPELKDHLRIFR 360
Query: 155 PRHLT 159
PR LT
Sbjct: 361 PRKLT 365
>gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]
Length = 593
Score = 30.8 bits (68), Expect = 3.8
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 4 SRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPESEPR 63
S RGRG AG+RA PR + L SAGRG S H ++ E VP P
Sbjct: 377 SIRGRGRGAAGNRAPG---PRGSYLGGYSAGRGIYSRYHEGKGKQQEKGYELVPNLEIPT 433
Query: 64 ADFRSGK--WLQEPATGDARDSRQALRA-RMSSKHRICSQEEVVIPCAYDSDSES 115
+ + K + PA G A A +M +I + E ++ P A D S
Sbjct: 434 VNPVAIKPGTVAIPAIGAQYSMFPAAPAPKMIEDGKIHTVEHMISPIAVQPDPAS 488
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 30.8 bits (68), Expect = 3.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Query: 12 LAGSRAATSNLP-RATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPESEPRADFRSGK 70
+ G++AAT LP RA P RG S EQ PP PRA R G+
Sbjct: 360 IPGAQAATRGLPGRAARRKPPPLTRG--------------RSVEQSPPRERPRAAGRRGR 405
Query: 71 WLQEPATGDARDSRQALRAR 90
+ + +R+A R++
Sbjct: 406 MAEASGRRGSPRARKASRSQ 425
>gi|7662655 SBBI31 protein [Homo sapiens]
Length = 169
Score = 30.8 bits (68), Expect = 3.8
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 291 EIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERA 350
E++ NG + F A + L+ + K P + + KH+ W+ V + R+
Sbjct: 25 EVLMNGRKHFVEKRYSEFHALHKKLKKCI-KTPEIPS-----KHVRNWVPKVLEQRRQGL 78
Query: 351 TASMAQVLKCLSKHLNLKLPLRFQRLGHLVAL-MALLCGDPQEKVAEEAAEGIHSLLHIT 409
+ V+ L KL L F + HL +L A CG E +EE+++ H + +
Sbjct: 79 ETYLQAVI--LENEELPKLFLDFLNVRHLPSLPKAESCGSFDETESEESSKLSHQPVLLF 136
Query: 410 LRLKYITHDKKDQQNL 425
LR Y+ D N+
Sbjct: 137 LRDPYVLPAASDFPNV 152
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 30.8 bits (68), Expect = 3.8
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 305 RQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASMAQVLKCLSKH 364
R+ ++++ EML S + DP + +Q+++D E M ++ L++H
Sbjct: 1847 REMYRSYVEMLVSTAL-DPDM-------------IQALEDTHDELYLPPMRKIDGLLNEH 1892
Query: 365 LNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKYITHDKKDQQN 424
L +RL AL L PQ +V E++ EG + LR +++K
Sbjct: 1893 KKKVL----KRLSLSPALQDALHTFPQLQV-EQSGEGSPEEGAVRLRPAGEPYNRKTLSK 1947
Query: 425 LKRALTKCREF-LELHSSAAKCFYN 448
LKR++ + +EF +EL S Y+
Sbjct: 1948 LKRSVVRAQEFKVELEKSGYYTLYH 1972
>gi|76563908 hypothetical protein LOC169436 [Homo sapiens]
Length = 680
Score = 30.4 bits (67), Expect = 4.9
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 325 LENLDTIIKHLVPWLQSVKDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMA 384
+E ++T +KH++ ++ + DH +A + +LK H+++ L G + +L
Sbjct: 45 VEEMETKVKHVIKQVECMDDHYASQALEELMPLLKLRHAHISVYQELFITWNGEISSLYL 104
Query: 385 LLCGDPQEKVAEEAAE 400
L + E +E E
Sbjct: 105 CLVMEFNELSFQEVIE 120
>gi|239746217 PREDICTED: zinc finger protein 66 [Homo sapiens]
Length = 1114
Score = 30.4 bits (67), Expect = 4.9
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 41/244 (16%)
Query: 135 LTDLDIPDIPGLHCEPLSH------SPRHLTQQDPLS----EAIVEKLIQSIQKVFNGEL 184
L+ + +P+ + C+PLSH SP HL+Q + L EK + S V + E
Sbjct: 851 LSPIHLPEWKPVPCQPLSHHTGKLFSPTHLSQWETLHCEPLNHYCEKPVHSESLVQHSEK 910
Query: 185 KGELEKLKFLGDLSSLSQALPYDETAK-SFIHS------HIADIVHTLNVLVQEERPHSL 237
+ + L +++ + ET S HS H VH L P S
Sbjct: 911 LFTVSHIFNKRYLITVTHSFTTVETCSLSSNHSPQCEPVHCQPFVHYCGYLFTLTHPFST 970
Query: 238 SSSMRQEVFVTIADLSYQDVHLLLGSEDRA--ELFSLTIKSIITL---------PSVRTL 286
+R + + H L+ R+ +LF++T +SIITL + +
Sbjct: 971 WEPVRCLSLIHQNGNLFTFTHSLITKLIRSSGKLFTVT-QSIITLRICSLGKHFNATHSF 1029
Query: 287 TQIQEIMPNGTCNTECLYRQTFQAFS----EMLQSLVVKDP--------HLENLDTIIKH 334
T + + T ++E +YRQT S + S + +P H NL T+
Sbjct: 1030 TAVVICSLSATQSSEPVYRQTLILNSGYKLTVTLSFITWEPVHCHPHIHHSGNLFTLTNS 1089
Query: 335 LVPW 338
L+ W
Sbjct: 1090 LITW 1093
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 30.4 bits (67), Expect = 4.9
Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 36/171 (21%)
Query: 2 PLSRRGRGSRLAGSRAATSNLPRATALSPKSAGRGALS----ISHAQLLTRRRHSSEQVP 57
P +R +G+R AG +A LP A P+ A G L A T + S Q P
Sbjct: 40 PATRTTKGAREAGGQAQAMELPEA---QPRQARDGELKPPSLRGQAPSSTPGKRGSPQTP 96
Query: 58 PESEPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYDSDSESVD 117
P P LQ P SR A RA S R ++ A ++D
Sbjct: 97 PGRSP---------LQAP-------SRLAGRAEGSPPQR------YILGIASSRTKPTLD 134
Query: 118 LELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAI 168
N ++ + +L ++D P PG PR T+ P +E +
Sbjct: 135 ETPENPQL-----EAAQLPEVDTPQGPGTGAPLRPGLPR--TEAQPAAEEL 178
>gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]
Length = 196
Score = 30.0 bits (66), Expect = 6.5
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 5 RRGR-GSRLAGSRAATSNLPRATALSPKSAGRGALSISHAQLLTRRRHS----SEQVPPE 59
RRG GSR G A + P+ ++ +G GA S S AQ R S S+ P
Sbjct: 57 RRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGR 116
Query: 60 SEPRADFRSGKWLQE-PATGDARDSRQALRARMSSK 94
R GK Q + R SR+A A + +
Sbjct: 117 GAAWGSLRPGKRQQALESEAGGRASREARAAEVRER 152
>gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
Length = 1359
Score = 30.0 bits (66), Expect = 6.5
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 6 RGRGSRLAGSRAATS------NLPRATALSPKSAGRGALSISHAQLLTRRRHSSEQVPPE 59
+GR + G+RA + P A A SAG+G +S S ++ T R H Q
Sbjct: 28 KGRQAARTGTRAGQGLQNGHEDGPAALAHRKTSAGKGHVSDSESRRSTPRGHGEPQSTSA 87
Query: 60 SE-PRADFRS---GKWLQEPATGD----ARDSRQALRARMSSKH 95
S A F + W P TG+ R RQ R++ +H
Sbjct: 88 SRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGRQEARSQKPREH 131
>gi|148886716 downstream of Stk11 [Homo sapiens]
Length = 447
Score = 30.0 bits (66), Expect = 6.5
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 4 SRRGRGSRL-AGSRAATSNLPRATALSPKSAGRGALSISHAQLLTR-RRHSS-EQVPPES 60
S G G+ L AG+R+ + P A A P AG G+ + + Q LTR RRH+S + P
Sbjct: 243 SDSGEGTSLDAGTRSTKAGGPGAAA-GPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY- 300
Query: 61 EPRADFRSGKWLQEPATGDAR-DSRQALRARMSSKHRICSQ 100
F+ KW EP+ A D+R + + + R S+
Sbjct: 301 -----FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASE 336
>gi|105990532 apolipoprotein B precursor [Homo sapiens]
Length = 4563
Score = 29.6 bits (65), Expect = 8.4
Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 196 DLSSLSQALPYD--ETAKSFIHSHIADIVHTLNVLVQEERPHSLSSSMRQEVFVTIAD 251
D++ + Q LP++ E K+F+ SHIA+I+++ + +Q+ + + ++++ T+ D
Sbjct: 573 DINKIVQILPWEQNEQVKNFVASHIANILNSEELDIQDLK-KLVKEALKESQLPTVMD 629
>gi|51873064 mannosidase, alpha, class 2B, member 1 precursor [Homo
sapiens]
Length = 1011
Score = 29.6 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 26 TALSPKSAGRGALSISHAQLLTRRRHSSEQVPPESEPRADFRSGKWLQEPATGDARDSRQ 85
T L+ +S G +L +L+ RR + SEP + SG W++ D+ Q
Sbjct: 792 TVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLMENGSGAWVRGRHL-VLLDTAQ 850
Query: 86 ALRARMSSKHRICSQEEVVIP 106
A A HR+ +++EV+ P
Sbjct: 851 AAAA----GHRLLAEQEVLAP 867
>gi|11342664 myxovirus resistance protein 2 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 8.4
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 112 DSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVEK 171
+ + EL +LEI +S E+ DL I D+PG+ + + PR + Q +A+++K
Sbjct: 200 NGRGISHELISLEI-----TSPEVPDLTIIDLPGITRVAVDNQPRDIGLQ---IKALIKK 251
Query: 172 LIQSIQKV 179
IQ Q +
Sbjct: 252 YIQRQQTI 259
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,003,113
Number of Sequences: 37866
Number of extensions: 932048
Number of successful extensions: 2843
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2803
Number of HSP's gapped (non-prelim): 44
length of query: 608
length of database: 18,247,518
effective HSP length: 108
effective length of query: 500
effective length of database: 14,157,990
effective search space: 7078995000
effective search space used: 7078995000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.