Guide to the Human Genome
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Name: MAN2B1 Sequence: fasta or formatted (1011aa) NCBI GI: 51873064
Description:

mannosidase, alpha, class 2B, member 1 precursor

Referenced in:

Protein Glycosylation
Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         84           4
 C cysteine            1.2         12           1
 D aspartate           5.1         52           2
 E glutamate           4.5         45           1
 F phenylalanine       4.4         44           3
 G glycine             6.9         70           3
 H histidine           2.7         27           2
 I isoleucine          2.8         28           1
 K lysine              2.4         24           1
 L leucine            10.8        109           4
 M methionine          2.1         21           1
 N asparagine          4.7         48           1
 P proline             6.7         68           2
 Q glutamine           5.6         57           2
 R arginine            6.9         70           3
 S serine              5.9         60           2
 T threonine           5.6         57           2
 V valine              7.3         74           2
 W tryptophan          2.7         27           2
 Y tyrosine            3.4         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mannosidase, alpha, class 2B, member 1 precursor [Ho... 
MAN2B2                0.138   mannosidase, alpha, class 2B, member 2 
MAN2A2                0.127   mannosidase, alpha, class 2A, member 2 
MAN2A1                0.124   mannosidase, alpha, class 2A, member 1 
TLK1                  0.005   tousled-like kinase 1 isoform 3 
TLK1                  0.005   tousled-like kinase 1 isoform 2 
TLK1                  0.005   tousled-like kinase 1 isoform 1 
RBM26                 0.004   RNA binding motif protein 26 
KIF26B                0.003   kinesin family member 26B 
ACAP1                 0.003   centaurin beta1 
FAM116B               0.003   hypothetical protein LOC414918 
KCTD13                0.002   potassium channel tetramerisation domain containing ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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