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Search of human proteins with 47519929
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
(1288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 2642 0.0
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 2597 0.0
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 1868 0.0
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 1861 0.0
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 1735 0.0
gi|18640734 contactin associated protein-like 5 [Homo sapiens] 1407 0.0
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 1219 0.0
gi|239743797 PREDICTED: similar to cell recognition molecule CAS... 1196 0.0
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 879 0.0
gi|239743729 PREDICTED: similar to contactin associated protein-... 722 0.0
gi|169184330 PREDICTED: novel protein similar to contactin assoc... 551 e-156
gi|239758135 PREDICTED: similar to cell recognition molecule CAS... 268 3e-71
gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens] 219 1e-56
gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens] 219 2e-56
gi|239752499 PREDICTED: similar to cell recognition molecule Cas... 144 4e-34
gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens] 139 2e-32
gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens] 138 3e-32
gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens] 112 3e-24
gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Ho... 89 3e-17
gi|105990535 coagulation factor V precursor [Homo sapiens] 86 3e-16
gi|62420886 discoidin domain receptor family, member 2 precursor... 83 1e-15
gi|62420884 discoidin domain receptor family, member 2 precursor... 83 1e-15
gi|54873613 agrin [Homo sapiens] 79 3e-14
gi|38327632 discoidin domain receptor family, member 1 isoform b... 79 3e-14
gi|83977452 discoidin domain receptor family, member 1 isoform c... 79 3e-14
gi|83977450 discoidin domain receptor family, member 1 isoform a... 79 3e-14
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 78 6e-14
gi|33469931 EGF-like, fibronectin type III and laminin G domains... 78 6e-14
gi|33469929 EGF-like, fibronectin type III and laminin G domains... 78 6e-14
gi|10518506 coagulation factor VIII isoform b precursor [Homo sa... 77 8e-14
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 2642 bits (6849), Expect = 0.0
Identities = 1288/1288 (100%), Positives = 1288/1288 (100%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK
Sbjct: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV
Sbjct: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
Query: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA
Sbjct: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
Query: 481 VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL
Sbjct: 481 VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
Query: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN
Sbjct: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
Query: 601 PSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA 660
PSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA
Sbjct: 601 PSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA 660
Query: 661 AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ
Sbjct: 661 AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
Query: 721 KCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTL 780
KCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTL
Sbjct: 721 KCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTL 780
Query: 781 GPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
GPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI
Sbjct: 781 GPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
Query: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ
Sbjct: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
Query: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG
Sbjct: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
Query: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL
Sbjct: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
Query: 1021 SENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
SENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRY
Sbjct: 1021 SENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
Query: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKS 1140
KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKS
Sbjct: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKS 1140
Query: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM
Sbjct: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
Query: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLC 1260
ARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLC
Sbjct: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLC 1260
Query: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 2597 bits (6731), Expect = 0.0
Identities = 1265/1288 (98%), Positives = 1277/1288 (99%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCD+PLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLY LDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
SS LDLNFEISFGGI +PGRSRAF RKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV
Sbjct: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL+RGSGSFV
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
Query: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
LFLKDGKLKLSLFQ GQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA
Sbjct: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
Query: 481 VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
VLIDSGDTYYFGGCL NSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL
Sbjct: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
Query: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN
Sbjct: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
Query: 601 PSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA 660
PSGLYYIDADGSGPLGPFLVYCNMTAD+AWTVV+HGGPDAVTLRGAPSGHP SAVSFAYA
Sbjct: 601 PSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 660
Query: 661 AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
AGAGQLR+AVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ
Sbjct: 661 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
Query: 721 KCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTL 780
KCTCGLEGNCIDSQYYCNCDAG+NEWTSDTIVLSQKEHLPVTQIVMTD G+PHSEA YTL
Sbjct: 721 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 780
Query: 781 GPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
GPLLCRGD+SFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI
Sbjct: 781 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
Query: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ
Sbjct: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
Query: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG
Sbjct: 901 PAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAG 960
Query: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL
Sbjct: 961 HCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTL 1020
Query: 1021 SENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
SENSSSLVSSL+RDVTLTREMITLSFRTTR+PSLLLYVSSFYEEYLSVILANNGSLQIRY
Sbjct: 1021 SENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQIRY 1080
Query: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKS 1140
KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQS KKQVILSSGTEFNAVKS
Sbjct: 1081 KLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAVKS 1140
Query: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM
Sbjct: 1141 LILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPM 1200
Query: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLC 1260
ARCAAGAASGSPARELAPRLAGGAGRSGP DEGEPLVNADRRDSAV+GGVIAVVIFILLC
Sbjct: 1201 ARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFILLC 1260
Query: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 1261 ITAIAIRIYQQRKLRKENESKVSKKEEC 1288
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 1868 bits (4840), Expect = 0.0
Identities = 899/918 (97%), Positives = 908/918 (98%), Gaps = 1/918 (0%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCD+PLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLY LDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
SS LDLNFEISFGGI +PGRSRAF RKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV
Sbjct: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL+RGSGSFV
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
Query: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
LFLKDGKLKLSLFQ GQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA
Sbjct: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVA 480
Query: 481 VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
VLIDSGDTYYFGGCL NSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL
Sbjct: 481 VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDL 540
Query: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN
Sbjct: 541 QIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGN 600
Query: 601 PSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA 660
PSGLYYIDADGSGPLGPFLVYCNMT D+AWTVV+HGGPDAVTLRGAPSGHP SAVSFAYA
Sbjct: 601 PSGLYYIDADGSGPLGPFLVYCNMT-DSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAYA 659
Query: 661 AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 720
AGAGQLR+AVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ
Sbjct: 660 AGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQ 719
Query: 721 KCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTL 780
KCTCGLEGNCIDSQYYCNCDAG+NEWTSDTIVLSQKEHLPVTQIVMTD G+PHSEA YTL
Sbjct: 720 KCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYTL 779
Query: 781 GPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 840
GPLLCRGD+SFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI
Sbjct: 780 GPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFI 839
Query: 841 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 900
RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ
Sbjct: 840 RIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQ 899
Query: 901 PAPADGHVRLQLNSQLFI 918
PAPADGHVRLQLNSQLFI
Sbjct: 900 PAPADGHVRLQLNSQLFI 917
Score = 553 bits (1426), Expect = e-157
Identities = 285/290 (98%), Positives = 288/290 (99%)
Query: 999 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYV 1058
EISAYFATGSSMTYHFQEHYTLSENSSSLVSSL+RDVTLTREMITLSFRTTR+PSLLLYV
Sbjct: 918 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV 977
Query: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1118
SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE
Sbjct: 978 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1037
Query: 1119 VNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1178
VNQS KKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP
Sbjct: 1038 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1097
Query: 1179 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVN 1238
LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGP DEGEPLVN
Sbjct: 1098 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 1157
Query: 1239 ADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ADRRDSAV+GGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 1158 ADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 1207
Score = 51.2 bits (121), Expect = 6e-06
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 24/261 (9%)
Query: 757 EHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTAD 816
E+L + +T+ + H +G + Q +F + SYL P GE
Sbjct: 334 ENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVS 393
Query: 817 VCFFFKTTVSSG--VFME-NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 873
V F F+T +G +F E G F+ +++ F G P VT + ND
Sbjct: 394 VTFQFRTWNRAGHLLFGELQRGSGSFVLFLKDGKLKLSL-FQAGQSPRNVTAGAG--LND 450
Query: 874 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRG------ 927
QWH V ++ VD +QP A V + + GG G
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDD-DTAVQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSP 506
Query: 928 ---FLGCIRSLQLNGVALD--LEERATVTPGVE---PGCAGHCSTYGHLCRNGGRCREKR 979
F GC+R + + A+D L ++ + + C C +GG C +
Sbjct: 507 LGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW 566
Query: 980 RGVTCDCAFSAYDGPFCSNEI 1000
+CDC + Y G C + +
Sbjct: 567 DTFSCDCLGTGYTGETCHSSL 587
Score = 33.5 bits (75), Expect = 1.3
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 821 FKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTP-----FNDN 874
FK S+G+ + G + I +EL ++ F + GN T+ T +D
Sbjct: 212 FKAMQSNGILLHREGQHGNHITLEL-IKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 875 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT-------ATRQRG 927
WH V E + VD+ Q A D L LN ++ GG A ++
Sbjct: 271 HWHSVLIELLDTQVNFTVDKHTHHFQ-AKGDSS-NLDLNFEISFGGILSPGRSRAFTRKS 328
Query: 928 FLGCIRSLQLNGV 940
F GC+ +L NGV
Sbjct: 329 FHGCLENLYYNGV 341
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sapiens]
Length = 1308
Score = 1861 bits (4820), Expect = 0.0
Identities = 906/1286 (70%), Positives = 1049/1286 (81%), Gaps = 8/1286 (0%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
M SV AVLK LLLL TQ W+ V AGN DCD PL SALP++SFSSSSELSSSHGPGF+R
Sbjct: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGW+PLVSNKYQWLQIDLGERMEVTAVATQGGYGSS+WVTSYLLMFSD G NW
Sbjct: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYR+E+SIWGF GN NADSVV+YRLQP +ARFLRF+PL WNP+GRIGMRIEV+GCAY+
Sbjct: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
Query: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVV DG+S+LLYR D+K L PI+D+ISLKFK MQS+GILLHREG +G+HITL+L + +
Sbjct: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
L +NSG AKLPST V LTLGSLLDDQHWHSVLI+ L QVNFTVD+H HHF A+G+
Sbjct: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
Query: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
+ ++L++EISFGGIP PG+S +F ++FHGCLENLYYNGVD+ +LAK+ KPQI+ MGNV
Sbjct: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
Query: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
SFSC QPQ++PVTFLSSRSYLALP SGE++VS TFQFRTWN+AG LLF EL+ SG +
Sbjct: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
Query: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA-VQPLV 479
LFL DGKLK +L+QPG+ P ++TAG LNDGQWHSVS SAK +H++V VD A PL+
Sbjct: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
Query: 480 AV-LIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
I SG TYYFGGC D S GS CKSPLGGFQGC+RLI+I K VD I VQQG+LG+F
Sbjct: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
Query: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHR 598
DLQIDSCGI+DRCLP+YCEHGGECSQSW TF C+C TGY G TCH+S+YEQSCEA+KHR
Sbjct: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
Query: 599 GNPSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFA 658
GN SG YYID+DGSGPL PFL+YCNMT + AWT++QH G D +R +P + F
Sbjct: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMT-ETAWTIIQHNGSDLTRVRNTNPENPYAGF-FE 658
Query: 659 YAAGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPD 718
Y A QL++ +N AE CEQ C +R + +DGTPLSWWVGRTNET T WGGS PD
Sbjct: 659 YVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPD 718
Query: 719 AQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAY 778
QKCTCGLEGNCIDSQYYCNCDA RNEWT+DT +L+ KEHLPVT+IV+TD GR HSEAAY
Sbjct: 719 LQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAY 778
Query: 779 TLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITD 838
LGPLLC+GD+SFWNSASF+TE SYLHFP FHGEL+ADV FFFKTT SSGVF+ENLGI D
Sbjct: 779 KLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIAD 838
Query: 839 FIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQK 898
FIRIELR+PT VTFSFDVGNGP E++VQSPT FNDNQWHHVR ERN+K ASLQVDQL K
Sbjct: 839 FIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPK 898
Query: 899 MQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
QPAPADGHV LQLNSQLF+GGTATRQRGFLGCIRSLQLNG+ LDLEERA VTP V+PGC
Sbjct: 899 TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGC 958
Query: 959 AGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHY 1018
GHCS+YG LCRNGG+CRE+ G CDC FSAY GPFCSNEISAYF +GSS+ Y+FQE+Y
Sbjct: 959 RGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENY 1018
Query: 1019 TLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQI 1078
LS+NSSS +S H D+ L+REMI SFRTTRTPSLLL+VSSFY+EYLSVI+A NGSLQI
Sbjct: 1019 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI 1078
Query: 1079 RYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAV 1138
RYKL+++Q PD FDFKNMADGQLH + INREE VV +E++ + ++QV LSSGTEF+AV
Sbjct: 1079 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAV 1138
Query: 1139 KSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVA 1198
KSL+LG++LE + D DT A GFTGCLSAV+ APLKAAL PS P VTV GHV
Sbjct: 1139 KSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVT 1198
Query: 1199 PMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFIL 1258
+ C A + + +RE R A SG D+ EPL NA + DSAVIGG+IAVVIFIL
Sbjct: 1199 E-SSCMAQPGTDATSRE---RTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFIL 1254
Query: 1259 LCITAIAIRIYQQRKLRKENESKVSK 1284
LCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1255 LCITAIAVRIYQQKRLYKRSEAKRSE 1280
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sapiens]
Length = 1235
Score = 1735 bits (4494), Expect = 0.0
Identities = 855/1257 (68%), Positives = 989/1257 (78%), Gaps = 56/1257 (4%)
Query: 30 DCDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERM 89
DCD PL SALP++SFSSSSELSSSHGPGF+RLNRRDGAGGW+PLVSNKYQWLQIDLGERM
Sbjct: 5 DCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGERM 64
Query: 90 EVTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPP 149
EVTAVATQGGYGSS+WVTSYLLMFSD G NWKQYR+E+SIWGF GN NADSVV+YRLQP
Sbjct: 65 EVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPS 124
Query: 150 FEARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVIS 209
+ARFLRF+PL WNP+GRIGMRIEV+GCAY+SEVV DG+S+LLYR D+K L PI+D+IS
Sbjct: 125 IKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIIS 184
Query: 210 LKFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDD 269
LKFK MQS+GILLHREG +G+HITL+L + +L +NSG AKLPST V LTLGSLLDD
Sbjct: 185 LKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDD 244
Query: 270 QHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSF 329
QHWHSVLI+ L QVNFTVD+H HHF A+G+ + ++L++E
Sbjct: 245 QHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYE-------------------- 284
Query: 330 HGCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGE 389
GNVSFSC QPQ++PVTFLSSRSYLALP SGE
Sbjct: 285 ----------------------------GNVSFSCSQPQSMPVTFLSSRSYLALPDFSGE 316
Query: 390 DKVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLN 449
++VS TFQFRTWN+AG LLF EL+ SG +LFL DGKLK +L+QPG+ P ++TAG LN
Sbjct: 317 EEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELN 376
Query: 450 DGQWHSVSFSAKWSHMNVVVDDDTA-VQPLVAV-LIDSGDTYYFGGCLDNSSGSGCKSPL 507
DGQWHSVS SAK +H++V VD A PL+ I SG TYYFGGC D S GS CKSPL
Sbjct: 377 DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPL 436
Query: 508 GGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWD 567
GGFQGC+RLI+I K VD I VQQG+LG+F DLQIDSCGI+DRCLP+YCEHGGECSQSW
Sbjct: 437 GGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWS 496
Query: 568 TFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTAD 627
TF C+C TGY G TCH+S+YEQSCEA+KHRGN SG YYID+DGSGPL PFL+YCNMT +
Sbjct: 497 TFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMT-E 555
Query: 628 AAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYAAGAGQLRSAVNLAERCEQRLALRCGTA 687
AWT++QH G D +R +P + F Y A QL++ +N AE CEQ C +
Sbjct: 556 TAWTIIQHNGSDLTRVRNTNPENPYAGF-FEYVASMEQLQATINRAEHCEQEFTYYCKKS 614
Query: 688 RRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWT 747
R + +DGTPLSWWVGRTNET T WGGS PD QKCTCGLEGNCIDSQYYCNCDA RNEWT
Sbjct: 615 RLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWT 674
Query: 748 SDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFP 807
+DT +L+ KEHLPVT+IV+TD GR HSEAAY LGPLLC+GD+SFWNSASF+TE SYLHFP
Sbjct: 675 NDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFP 734
Query: 808 AFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQS 867
FHGEL+ADV FFFKTT SSGVF+ENLGI DFIRIELR+PT VTFSFDVGNGP E++VQS
Sbjct: 735 TFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQS 794
Query: 868 PTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRG 927
PT FNDNQWHHVR ERN+K ASLQVDQL K QPAPADGHV LQLNSQLF+GGTATRQRG
Sbjct: 795 PTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRG 854
Query: 928 FLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCA 987
FLGCIRSLQLNG+ LDLEERA VTP V+PGC GHCS+YG LCRNGG+CRE+ G CDC
Sbjct: 855 FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCT 914
Query: 988 FSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFR 1047
FSAY GPFCSNEISAYF +GSS+ Y+FQE+Y LS+NSSS +S H D+ L+REMI SFR
Sbjct: 915 FSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFR 974
Query: 1048 TTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVK 1107
TTRTPSLLL+VSSFY+EYLSVI+A NGSLQIRYKL+++Q PD FDFKNMADGQLH +
Sbjct: 975 TTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIM 1034
Query: 1108 INREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGC 1167
INREE VV +E++ + ++QV LSSGTEF+AVKSL+LG++LE + D DT A GFTGC
Sbjct: 1035 INREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGC 1094
Query: 1168 LSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRS 1227
LSAV+ APLKAAL PS P VTV GHV + C A + + +RE R A S
Sbjct: 1095 LSAVQLSHVAPLKAALHPSHPDPVTVTGHVTE-SSCMAQPGTDATSRE---RTHSFADHS 1150
Query: 1228 GPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSK 1284
G D+ EPL NA + DSAVIGG+IAVVIFILLCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1151 GTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSE 1207
>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
Length = 1306
Score = 1407 bits (3641), Expect = 0.0
Identities = 690/1279 (53%), Positives = 900/1279 (70%), Gaps = 13/1279 (1%)
Query: 11 VLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGW 70
VL LL + W +CD PLAS L +FSSSS+L+ +H P ++LN R G GGW
Sbjct: 10 VLTLLFSGLWHLGLTATNYNCDDPLASLLSPMAFSSSSDLTGTHSP--AQLNWRVGTGGW 67
Query: 71 TPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIW 130
+P SN QWLQ+DLG R+E+TAVATQG YGSSDWVTSY LMFSD GRNWKQY++E+SIW
Sbjct: 68 SPADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQEDSIW 127
Query: 131 GFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQS 190
F GN NADSVVH++L ARF+RF+PL WNP G+IGMR+EVYGC+YKS+V FDG+S
Sbjct: 128 TFAGNMNADSVVHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADFDGRS 187
Query: 191 ALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNA 250
+LLYR ++K + ++DVISLKFK+MQ +G+L H EGQ G+HITLEL KG+L LN G++
Sbjct: 188 SLLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLNLGDS 247
Query: 251 KLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEI 310
K + + + TLGSLLDDQHWHSVLIE + QVNFTVDKHT HF+ KG++ LD+++E+
Sbjct: 248 KARLSSSLPSATLGSLLDDQHWHSVLIERVGKQVNFTVDKHTQHFRTKGETDALDIDYEL 307
Query: 311 SFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTV 370
SFGGIP PG+ F +K+FHGC+ENLYYNGV++ +LAK+ K QI GNV+FSC +PQ V
Sbjct: 308 SFGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYT-GNVTFSCSEPQIV 366
Query: 371 PVTFL-SSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLK 429
P+TF+ SS SYL LPG D +SV+FQFRTWN+ G LL EL GSG+ +L L+ G L+
Sbjct: 367 PITFVNSSGSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILR 426
Query: 430 LSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA--VQPLVAVLIDSGD 487
L + + + + G+ LNDG WHSVS +A+ + + + +DD+ A V I SG+
Sbjct: 427 LVIQKMTERVAEILTGSNLNDGLWHSVSINARRNRITLTLDDEAAPPAPDSTWVQIYSGN 486
Query: 488 TYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGI 547
+YYFGGC DN + S C +P+ FQGC+RLI I ++ D I VQQG+LG+F DL ID C I
Sbjct: 487 SYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSI 546
Query: 548 TDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYI 607
DRCLP+YCEHGG CSQSW TF C+C T YTG TCH+S+YEQSCE ++H+GN +G +YI
Sbjct: 547 KDRCLPNYCEHGGSCSQSWTTFYCNCSDTSYTGATCHNSIYEQSCEVYRHQGNTAGFFYI 606
Query: 608 DADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYAAGAGQLR 667
D+DGSGPLGP VYCN+T D WT VQH + +RGA P A++ Y QL
Sbjct: 607 DSDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTRVRGANPEKPY-AMALDYGGSMEQLE 665
Query: 668 SAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLE 727
+ ++ +E CEQ +A C +R ++ DGTP +WW+GR+NE H WGGS P Q+C CGL+
Sbjct: 666 AVIDGSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNERHPYWGGSPPGVQQCECGLD 725
Query: 728 GNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRG 787
+C+D Q++CNCDA ++EWT+DT LS K+HLPVTQIV+TD R +SEAA+ +GPL C G
Sbjct: 726 ESCLDIQHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTDRSNSEAAWRIGPLRCYG 785
Query: 788 DQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAP 847
D+ FWN+ SF TE SYLHFP FH E +AD+ FFFKTT SGVF+ENLGI DFIR+E+ +P
Sbjct: 786 DRRFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFIRLEISSP 845
Query: 848 TEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGH 907
+E+TF+ DVGNGP E+ VQSP+ NDNQWH+VRAERN+K SLQVD LP+ + +GH
Sbjct: 846 SEITFAIDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEEGH 905
Query: 908 VRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGH 967
RLQLNSQLF+GGT++RQ+GFLGCIRSL LNG +DLEERA VT GV PGC GHCS+YG
Sbjct: 906 FRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCPGHCSSYGS 965
Query: 968 LCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSL 1027
+C NGG+C EK G CDC S Y+GPFC E+SA F G+S+TY FQE Y +++N S
Sbjct: 966 ICHNGGKCVEKHNGYLCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPVTKNISLS 1025
Query: 1028 VSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQN 1087
S+++ D ++E I LSF TT+ PSLLL+++S ++++ V+L NGSLQ+RY L++ +
Sbjct: 1026 SSAIYTDSAPSKENIALSFVTTQAPSLLLFINSSSQDFVVVLLCKNGSLQVRYHLNKEET 1085
Query: 1088 PDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVL 1147
FT D N A+ ++H +KINRE + ++++Q + S EF ++SL LGKV
Sbjct: 1086 -HVFTIDADNFANRRMHHLKINREGRELTIQMDQQLRLSYNFSPEVEFRVIRSLTLGKVT 1144
Query: 1148 EAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGA 1207
E G D + +A GF GC+S+V++ APLKAALR + + VTV G + + G
Sbjct: 1145 ENLGLDSEVAKANAMGFAGCMSSVQYNHIAPLKAALRHATVAPVTVHG---TLTESSCGF 1201
Query: 1208 ASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIR 1267
S + + + G DE EPL NA R DSAVIGGVIAVVIFI+ CI I R
Sbjct: 1202 MVDSDVNAVT-TVHSSSDPFGKTDEREPLTNAVRSDSAVIGGVIAVVIFIIFCIIGIMTR 1260
Query: 1268 IYQQRKLRKENESKVSKKE 1286
Q K + S++ +KE
Sbjct: 1261 FLYQHK-QSHRTSQMKEKE 1278
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapiens]
Length = 1331
Score = 1219 bits (3153), Expect = 0.0
Identities = 609/1277 (47%), Positives = 838/1277 (65%), Gaps = 26/1277 (2%)
Query: 31 CDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
CD PL S LP +FSSSS +S S+ PG++++N+R GAGGW+P S+ YQWLQ+D G R +
Sbjct: 35 CDEPLVSGLPHVAFSSSSSISGSYSPGYAKINKRGGAGGWSPSDSDHYQWLQVDFGNRKQ 94
Query: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
++A+ATQG Y SSDWVT Y +++SD GRNWK Y ++ +IW FPGN N+D VV + LQ P
Sbjct: 95 ISAIATQGRYSSSDWVTQYRMLYSDTGRNWKPYHQDGNIWAFPGNINSDGVVRHELQHPI 154
Query: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISL 210
AR++R +PL WN GRIG+RIEVYGC+Y ++V+ FDG L YR K +K ++DVI+L
Sbjct: 155 IARYVRIVPLDWNGEGRIGLRIEVYGCSYWADVINFDGHVVLPYRFRNKKMKTLKDVIAL 214
Query: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
FK +S G++LH EGQ G++ITLEL K KLV LN G+ +L ++ GSLLDD
Sbjct: 215 NFKTSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMTGSLLDDH 274
Query: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFH 330
HWHSV+IE +N T+D+ HF+ G+ YLDL++EI+FGGIP G+ + RK+F
Sbjct: 275 HWHSVVIERQGRSINLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSSSRKNFK 334
Query: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
GC+E++ YNGV++T+LA++ K + +GN+SFSC +P TVPV F ++ SYL +PG +D
Sbjct: 335 GCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPV-FFNATSYLEVPGRLNQD 393
Query: 391 KVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGK--LKLSLFQPGQSPRNVTAGAGL 448
SV+FQFRTWN G L+F G+ + L + K + +++ Q S ++++G+GL
Sbjct: 394 LFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISSGSGL 453
Query: 449 NDGQWHSVSFSAKWSHMNVVVDDD--TAVQPLVAVLIDSGDTYYFGGCLDNSSGSGCKSP 506
NDGQWH V F AK + + +D D +AV+ + + +G+ Y+FGG L+ + S
Sbjct: 454 NDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTGEKYFFGGFLNQMNNSSHSVL 513
Query: 507 LGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW 566
FQGC++LI + D+ V+ V Q GSF ++ ID C I DRC+P++CEHGG+CSQ+W
Sbjct: 514 QPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTW 573
Query: 567 DTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTA 626
D+F C C TGY+G TCH+S+YE SCEA+KH G S Y+ID DGSGPLGP VYCNMT
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAYKHLGQTSNYYWIDPDGSGPLGPLKVYCNMTE 633
Query: 627 DAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYAAGAGQLRSAVNLAERCEQRLALRCGT 686
D WT+V H + G + S Y+A Q+ + + AE CEQ ++ C
Sbjct: 634 DKVWTIVSHDLQMQTPVVGY-NPEKYSVTQLVYSASMDQISAITDSAEYCEQYVSYFCKM 692
Query: 687 ARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEW 746
+R ++ DG+P +WWVG+ NE H WGGS P QKC CG+E NC D +YYCNCDA +W
Sbjct: 693 SRLLNTPDGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDADYKQW 752
Query: 747 TSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHF 806
D LS K+HLPV+Q+V+ D R SEA ++GPL C+GD+++WN+ASF +SYLHF
Sbjct: 753 RKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQGDRNYWNAASFPNPSSYLHF 812
Query: 807 PAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQ 866
F GE +AD+ F+FKT GVF+EN+G DFI++EL++ TEV+FSFDVGNGP E+ V+
Sbjct: 813 STFQGETSADISFYFKTLTPWGVFLENMGKEDFIKLELKSATEVSFSFDVGNGPVEIVVR 872
Query: 867 SPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQR 926
SPTP ND+QWH V AERNVK ASLQVD+LPQ+++ AP +GH RL+L SQLF+GG A Q+
Sbjct: 873 SPTPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGG-AGGQQ 931
Query: 927 GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDC 986
GFLGCIRSL++NGV LDLEERA VT G GC+GHC++YG C NGG+C E+ G +CDC
Sbjct: 932 GFLGCIRSLRMNGVTLDLEERAKVTSGFISGCSGHCTSYGTNCENGGKCLERYHGYSCDC 991
Query: 987 AFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSL------HRDVTLTRE 1040
+ +AYDG FC+ ++ A+F G + Y+FQ T + +SSS V + H D L +E
Sbjct: 992 SNTAYDGTFCNKDVGAFFEEGMWLRYNFQAPATNARDSSSRVDNAPDQQNSHPD--LAQE 1049
Query: 1041 MITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMAD 1100
I SF TT+ P +LLY+SSF ++L+V++ GSLQIRY L + P D +NMA+
Sbjct: 1050 EIRFSFSTTKAPCILLYISSFTTDFLAVLVKPTGSLQIRYNLGGTREPYNIDVDHRNMAN 1109
Query: 1101 GQLHQVKINREEAVVMVEVNQ--STKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRR 1158
GQ H V I R E + ++++ S + SS T FN+ KSL LGKV+E D + +
Sbjct: 1110 GQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSSDTLFNSPKSLFLGKVIETGKIDQEIHK 1169
Query: 1159 AATSGFTGCLSAVRFGRAAPLKAALRPSGPS-RVTVRGHVAPMARCAAGAASGSPARELA 1217
T GFTGCLS V+F + APLKAALR + S V ++G + + C A + SP
Sbjct: 1170 YNTPGFTGCLSRVQFNQIAPLKAALRQTNASAHVHIQGELVE-SNCGASPLTLSPMSSAT 1228
Query: 1218 PRLAGGAGRSGPAD------EGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIR-IYQ 1270
S AD +G+ + N R+SA+IGGVIAVVIF +LC IR +++
Sbjct: 1229 DPWHLDHLDSASADFPYNPGQGQAIRNGVNRNSAIIGGVIAVVIFTILCTLVFLIRYMFR 1288
Query: 1271 QRKLRKENESKVSKKEE 1287
+ NE+K ++ E
Sbjct: 1289 HKGTYHTNEAKGAESAE 1305
>gi|239743797 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 944
Score = 1196 bits (3094), Expect = 0.0
Identities = 599/698 (85%), Positives = 612/698 (87%), Gaps = 40/698 (5%)
Query: 494 CLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP 553
CL NSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP
Sbjct: 187 CLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP 246
Query: 554 SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 613
SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG
Sbjct: 247 SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 306
Query: 614 PLGPFLVYCNMTADAAWTVVQ--------------------HGGPDAVTLRGAPSGHPRS 653
PLGPFLVYCNMT +A + GG RG P P+
Sbjct: 307 PLGPFLVYCNMTDRSALPLAAGLCRPVMPLLCPFLLSRLRVDGGAARWPRRGDPPRCPQW 366
Query: 654 AVSFAY----------AAGAGQ----LRSAVNLAERCEQR-----LALRCGTARRPDSRD 694
A + AAG G+ LR+A A R L ++ T + +
Sbjct: 367 APALGCVLRVRSGRGAAAGRGEPGGALRAAAGSALRDSAAPGLTSLMVKSVTFKVAFREE 426
Query: 695 -GTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVL 753
GTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVL
Sbjct: 427 YGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVL 486
Query: 754 SQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGEL 813
SQKEHLPVTQIVMTDAG+PHSEA YTLGPLLCRGD+SFWNSASFNTETSYLHFPAFHGEL
Sbjct: 487 SQKEHLPVTQIVMTDAGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGEL 546
Query: 814 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 873
TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND
Sbjct: 547 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 606
Query: 874 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIR 933
NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIR
Sbjct: 607 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIR 666
Query: 934 SLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG 993
SLQLNGVALDLEERATV PGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG
Sbjct: 667 SLQLNGVALDLEERATVMPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG 726
Query: 994 PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPS 1053
PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPS
Sbjct: 727 PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPS 786
Query: 1054 LLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEA 1113
LLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEA
Sbjct: 787 LLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEA 846
Query: 1114 VVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAG 1151
VVMVEVNQS KKQVILSSGTEFNAVKSLILGKVL +G
Sbjct: 847 VVMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLGRSG 884
Score = 122 bits (307), Expect = 2e-27
Identities = 62/64 (96%), Positives = 62/64 (96%)
Query: 1225 GRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSK 1284
GRSGP DEGEPLVNADRRDSAVIGGVIAV IFILLCITAIAIRIYQQRKLRKENESKVSK
Sbjct: 881 GRSGPVDEGEPLVNADRRDSAVIGGVIAVEIFILLCITAIAIRIYQQRKLRKENESKVSK 940
Query: 1285 KEEC 1288
KEEC
Sbjct: 941 KEEC 944
Score = 47.8 bits (112), Expect = 7e-05
Identities = 59/261 (22%), Positives = 96/261 (36%), Gaps = 24/261 (9%)
Query: 334 ENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVS 393
E+L + +T+ + H +G + + +F + SYL P GE
Sbjct: 490 EHLPVTQIVMTDAGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTAD 549
Query: 394 VTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSL-FQPGQSPRNVT--AGAGLND 450
V F F+T +G +F E G F+ +++ F G P VT + ND
Sbjct: 550 VCFFFKTTVSSG--VFME-NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFND 606
Query: 451 GQWHSVSFSAKWSHMNVVVDD-DTAVQPLVA---VLIDSGDTYYFGGCLDNSSGSGCKSP 506
QWH V ++ VD +QP A V + + GG
Sbjct: 607 NQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQR------- 659
Query: 507 LGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW 566
GF GC+R + + A+D L ++ + + C C +GG C +
Sbjct: 660 --GFLGCIRSLQLNGVALD--LEERATVMPGVE---PGCAGHCSTYGHLCRNGGRCREKR 712
Query: 567 DTFSCDCLGTGYTGETCHSSL 587
+CDC + Y G C + +
Sbjct: 713 RGVTCDCAFSAYDGPFCSNEI 733
Score = 36.2 bits (82), Expect = 0.21
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 212 FKAMQSNGILLHREGQHGNHITLEL-IKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
FK S+G+ + G + I +EL ++ F + GN T+ T +D
Sbjct: 554 FKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTP-----FNDN 607
Query: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSY--LDLNFEISFGGIPTPGRSRAFRRKS 328
WH V E + VD+ Q + L LN ++ GG T R++
Sbjct: 608 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTAT-------RQRG 660
Query: 329 FHGCLENLYYNGV 341
F GC+ +L NGV
Sbjct: 661 FLGCIRSLQLNGV 673
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 879 bits (2270), Expect = 0.0
Identities = 455/1212 (37%), Positives = 689/1212 (56%), Gaps = 60/1212 (4%)
Query: 31 CDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERME 90
CD L L S +SS S P F+RL+ G GW+P + + WLQIDL ++
Sbjct: 25 CDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQIDLMKKHR 81
Query: 91 VTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPF 150
+ AVATQG + S DWVT Y+L++ D +W + + F GN N +VV + L F
Sbjct: 82 IRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHF 141
Query: 151 EARFLRFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISL 210
AR++R +PLAWNPRG+IG+R+ +YGC YK++++YFDG A+ YR + + + DV +
Sbjct: 142 TARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAF 201
Query: 211 KFKAMQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
FK + +G+LLH EG G+++TLEL L+ ++ G++ + T++ G +L+DQ
Sbjct: 202 SFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQ 261
Query: 271 HWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFH 330
HWH V ++ VNFT+D + F GD L+L+ E+ GG+ R R +F
Sbjct: 262 HWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
Query: 331 GCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGED 390
GC+EN+ +N V++ +LA + +I G V+F C P P+ F +++ +PG
Sbjct: 322 GCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRG 381
Query: 391 KVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLND 450
+++V+F+FRTW+ G LLF L G G L L +G++ +S+ Q G+ AG LND
Sbjct: 382 RLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLND 441
Query: 451 GQWHSVSFSAKWSHMNVVVDDDTAVQPLVA--VLIDSGDTYYFGGCLDNSSGSGCKSPLG 508
G WH V+F A+ +H + +DD + V+ +LI +G +Y+FGGC +S C S
Sbjct: 442 GFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQT 501
Query: 509 GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDT 568
F GC+ L+ + + V+ LV+ LG + ++ D+CGITDRC P+ CEH G C QSWD
Sbjct: 502 AFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDD 561
Query: 569 FSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNMTADA 628
F C C TGY GETCH+ LY++SCEA++ G SG + ID DGSGPL PF+VYC++ +
Sbjct: 562 FICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRENR 621
Query: 629 AWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYAAGAGQLRSAVNLAERCEQRLALRCGTAR 688
AWTVV+H + G+ P + A ++ + N ++ CEQ + C +R
Sbjct: 622 AWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSR 681
Query: 689 RPDSRDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTS 748
++ G P S+W+GR E H WGGS P Q+C CGL+ +C+D YCNCDA + +W +
Sbjct: 682 LLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWRT 741
Query: 749 DTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPA 808
D +L+ +HLPVTQ+V+ D R SEA + L PL C GD++ WN+ SF+T + L FP
Sbjct: 742 DKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAA-LRFPP 800
Query: 809 FHGELTADVCFFFKTTVSSGVFMENLG------ITDFIRIELRAPTEVTFSFDVGNGPCE 862
+ DV F+F+T+ SGVF+EN+G ++R+EL +V F+FDVGNG
Sbjct: 801 IRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGNGDEN 860
Query: 863 VTVQSPT-PFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGT 921
+TV S FND++WH VRAE NVK A L+VD P ++P P ++ ++ + L++G
Sbjct: 861 LTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSA 920
Query: 922 ATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRG 981
++R F+GC+R+++LNGV L+LE RA + G P C GHC+ C +GGRC E+
Sbjct: 921 ELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGGRCVERYSY 980
Query: 982 VTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQE----------------------HYT 1019
TCDC +A+DGP+C+++I +F G+ M Y+ Q Y
Sbjct: 981 YTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYI 1040
Query: 1020 LSENSSSLVSSLH-------------RDV--------TLTREMITLSFRTTRTPSLLLYV 1058
++ V H R V +T E ++ SF T+ P++LLYV
Sbjct: 1041 PGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV 1100
Query: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR--EEAVVM 1116
SSF +Y++V++ ++G+LQ+RY+L +P + + + DGQ H + I R +
Sbjct: 1101 SSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITRVYRNLFIQ 1158
Query: 1117 VEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRA 1176
V+ T+++ L ++ ++ K+L LG+V+E DP+ +R T GF+GCLS VRF
Sbjct: 1159 VDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNV 1218
Query: 1177 APLKAALRPSGP 1188
APLK R P
Sbjct: 1219 APLKTHFRTPRP 1230
>gi|239743729 PREDICTED: similar to contactin associated
protein-like 3B [Homo sapiens]
Length = 380
Score = 722 bits (1863), Expect = 0.0
Identities = 352/357 (98%), Positives = 352/357 (98%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
SEVVYFDGQSALLY LDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIK K
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKRK 240
Query: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELL TQVNFTVDKHTHHFQAKGD
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLHTQVNFTVDKHTHHFQAKGD 300
Query: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMM 357
SS LDLNFEISFGGIPTPGRSRAF RKSFHGCLENLYYNGVDVTELAKKHKPQILMM
Sbjct: 301 SSNLDLNFEISFGGIPTPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMM 357
Score = 34.7 bits (78), Expect = 0.61
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 821 FKTTVSSGVFMENLGIT-DFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTP-----FNDN 874
FK S+G+ + G + I +EL ++ F + GN T+ T +D
Sbjct: 212 FKAMQSNGILLHREGQHGNHITLEL-IKRKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQ 270
Query: 875 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTAT-------RQRG 927
WH V E + VD+ Q A D L LN ++ GG T ++
Sbjct: 271 HWHSVLIELLHTQVNFTVDKHTHHFQ-AKGDSS-NLDLNFEISFGGIPTPGRSRAFTRKS 328
Query: 928 FLGCIRSLQLNGV 940
F GC+ +L NGV
Sbjct: 329 FHGCLENLYYNGV 341
Score = 33.1 bits (74), Expect = 1.8
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 394 VTFQFRTWNRAGHLLFGELRRGSG--------SFVLFLKDGKLKLSLFQPGQSPRNVTAG 445
++ +F+ G LL E + G+ V FL G KL +P +T G
Sbjct: 208 ISLKFKAMQSNGILLHREGQHGNHITLELIKRKLVFFLNSGNAKLP---STIAPVTLTLG 264
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDT 473
+ L+D WHSV + +N VD T
Sbjct: 265 SLLDDQHWHSVLIELLHTQVNFTVDKHT 292
>gi|169184330 PREDICTED: novel protein similar to contactin associated
protein-like 3 (CNTNAP3) [Homo sapiens]
Length = 291
Score = 551 bits (1421), Expect = e-156
Identities = 285/290 (98%), Positives = 286/290 (98%)
Query: 999 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYV 1058
+ISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYV
Sbjct: 2 KISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYV 61
Query: 1059 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1118
SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE
Sbjct: 62 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 121
Query: 1119 VNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1178
VNQS KKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFG AAP
Sbjct: 122 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGCAAP 181
Query: 1179 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVN 1238
LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGP DEGEPLVN
Sbjct: 182 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 241
Query: 1239 ADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 1288
ADRRDSAVIGGVIAV IFILLCITAIAIRIYQQRKLRKENESKVSKKEEC
Sbjct: 242 ADRRDSAVIGGVIAVEIFILLCITAIAIRIYQQRKLRKENESKVSKKEEC 291
>gi|239758135 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 140
Score = 268 bits (684), Expect = 3e-71
Identities = 137/138 (99%), Positives = 137/138 (99%)
Query: 1010 MTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVI 1069
MTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVI
Sbjct: 1 MTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVI 60
Query: 1070 LANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVIL 1129
LANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQS KKQVIL
Sbjct: 61 LANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVIL 120
Query: 1130 SSGTEFNAVKSLILGKVL 1147
SSGTEFNAVKSLILGKVL
Sbjct: 121 SSGTEFNAVKSLILGKVL 138
>gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens]
Length = 1477
Score = 219 bits (559), Expect = 1e-56
Identities = 254/1055 (24%), Positives = 440/1055 (41%), Gaps = 175/1055 (16%)
Query: 183 VVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
+ F G Y L + P++ D I+L FK +Q NG++LH G+ +++ L L G +
Sbjct: 283 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 341
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIE--------LLDTQVNFTVDKH-TH 293
+N G+ + + PV +D WH V + + V +VD T
Sbjct: 342 LVINLGSGAFEALVEPVN----GKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTT 397
Query: 294 HFQAKGDSSYLDLNFEISFGGIPT----PGRSRAFRRKSFHGCLENLYYNGVDV----TE 345
+ D + L + GG P+ PG + +F GCL+ + Y DV +
Sbjct: 398 TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS---NNFMGCLKEVVYKNNDVRLELSR 454
Query: 346 LAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRA 404
LAK+ P++ + G V+F C T+ P+TF + S+++LP + + S++F FRT
Sbjct: 455 LAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPN 514
Query: 405 GHLLF--GELRRGSGS----------FVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQ 452
G +LF G+ R + F + + DG L L L + + +NDG+
Sbjct: 515 GLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVNDGE 574
Query: 453 WHSVSFSAKWSHMNVVVDD--DTAVQPLVAVLIDSGDTYYFGGCLDNSSGSGCKSPLG-- 508
W+ V F + V+ P + ++D D Y GG +N +G + +
Sbjct: 575 WYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTA 634
Query: 509 ----GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDR-CLPSYCEHGGECS 563
G+ GC+R + I ++ D + Q + S ++ T + CL + C++ G C
Sbjct: 635 LLNYGYVGCIRDLFIDGQSKD--IRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCR 692
Query: 564 QSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCN 623
W+ + CDC GTGY G +SCE + DGS
Sbjct: 693 DGWNRYVCDCSGTGYLG---------RSCEREAT--------VLSYDGS----------- 724
Query: 624 MTADAAWTVVQHGGPDAVTLRGAP---------SGHPRSAVSFAYAAGAGQLRSAVNLAE 674
M VV H + V+LR + SA + AG+++ VNL
Sbjct: 725 MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNL-- 782
Query: 675 RCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHT--------SWGGSLPDAQKCTCGL 726
+ + C +++ P+ T + + NE HT S ++ D Q T +
Sbjct: 783 ---DCIRINCNSSKGPE----TLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQM 835
Query: 727 EGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPL-LC 785
G+ +++ N + G +++++ +L + + G S + + LC
Sbjct: 836 AGDHTRLEFH-NIETG---------IITERRYL--SSVPSNFIGHLQSLTFNGMAYIDLC 883
Query: 786 R-GDQSFW-------------NSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFM 831
+ GD + + +F T++SY+ + + F FKTT G+ +
Sbjct: 884 KNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLIL 943
Query: 832 ENLGI-TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASL 890
N G DFI +EL + + FD+GNG + S P NDNQWH+V R+ ++L
Sbjct: 944 YNSGDGNDFIVVEL-VKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDT--SNL 1000
Query: 891 QVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR-----------QRGFLGCIRSLQLNG 939
++ K+ G L L S L+IGG A + GF GC+ S+ LNG
Sbjct: 1001 HTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNG 1060
Query: 940 VALDLEERATVTPG-VEPGCAGHCST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCS 997
DL A G +E GC G +T C N G C ++ G +CDC+ +++ GP C+
Sbjct: 1061 RLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1120
Query: 998 NEISAYFAT--GSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLL 1055
+ + Y + G +TY + + S + + + + F T + ++L
Sbjct: 1121 DPGTTYIFSKGGGQITYKWPPNDRPSTRA---------------DRLAIGFSTVQKEAVL 1165
Query: 1056 LYV--SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKN--MADGQLHQVKINRE 1111
+ V SS +YL + + + G + +++ + D + N + DG+ H V+ R
Sbjct: 1166 VRVDSSSGLGDYLELHI-HQGKIGVKFNV----GTDDIAIEESNAIINDGKYHVVRFTRS 1220
Query: 1112 --EAVVMVEVNQSTKKQVILSSGTEFNAVKSLILG 1144
A + V+ ++ T FN+ ++I+G
Sbjct: 1221 GGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIG 1255
Score = 118 bits (296), Expect = 3e-26
Identities = 116/419 (27%), Positives = 182/419 (43%), Gaps = 21/419 (5%)
Query: 177 CAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + +L DV SL+F++ ++ GIL+ + + + LE
Sbjct: 712 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 770
Query: 236 LIKGKLVFFLNSGNAKLP--STIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVD-KHT 292
L G++ +N ++ S+ P TL G L+D WH+V + + TVD +
Sbjct: 771 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 830
Query: 293 HHFQAKGDSSYLDL-NFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHK 351
Q GD + L+ N E GI T R + +F G L++L +NG+ +L K
Sbjct: 831 MTGQMAGDHTRLEFHNIET---GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGD 887
Query: 352 PQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGE 411
+ N F PVTF + SY+AL + + FQF+T + G +L+
Sbjct: 888 IDYCEL-NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS 946
Query: 412 LRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVVV 469
G+ V+ L G L +F G + + LND QWH+V S S+++ V
Sbjct: 947 -GDGNDFIVVELVKGYLHY-VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVK 1004
Query: 470 DDDTAVQPLVAVL--IDSGDTYYFGGCLDNSSGSGCK--SPLGGFQGCLRLITIGDKAVD 525
D + A +D Y GG + S K GFQGCL + + + D
Sbjct: 1005 IDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD 1064
Query: 526 PILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q WD FSCDC T ++G C+
Sbjct: 1065 LI---SDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1120
Score = 73.6 bits (179), Expect = 1e-12
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 36/305 (11%)
Query: 800 ETSYLHFPAFHGELTADVCFFFKTTVSSGV--FMENLGITDFIRIELRAPTEVTFSFDVG 857
E + FP ++ +++ F KT + G+ + ++ G DF+ + L + SF +
Sbjct: 37 EGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIF 96
Query: 858 NGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLF 917
T+ + TP ND WH VR R + +L +DQ+ K + + + S LF
Sbjct: 97 CAE-PATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRR-DMTVFSGLF 154
Query: 918 IGG--------------TATRQR-GFLGCIRSLQLNGV--------ALDLEERATVTPGV 954
+GG + R+R F G IR +++N + L++ + G
Sbjct: 155 VGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGG 214
Query: 955 EPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEIS-----AYFATGSS 1009
P AG G +C NGG C CDC+ + + G CS E + A+ G
Sbjct: 215 SPCEAGE-EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQ 273
Query: 1010 MTYHFQEHY--TLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLS 1067
+E Y T + + + + ITLSF+T + L+L+ +Y++
Sbjct: 274 GKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGK-SADYVN 332
Query: 1068 VILAN 1072
+ L N
Sbjct: 333 LALKN 337
Score = 46.6 bits (109), Expect = 2e-04
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 34/213 (15%)
Query: 394 VTFQFRTWNRAGHLLFGELRRGSGSFV--LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDG 451
++FQ +T + G +L+ + G F+ + + G+L+LS P + A +NDG
Sbjct: 54 MSFQLKTRSARGLVLYFD-DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDG 112
Query: 452 QWHSVSFSAKWSHMNVVVDDDTAVQPLVA-----VLIDSGDTYYFGGCLDNSSGSGCKSP 506
WHSV ++ + + +D A V + + SG + GG + K
Sbjct: 113 AWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSG--LFVGGLPPELRAAALKLT 170
Query: 507 LGG------FQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDS----------CGITDR 550
L F+G +R + + V P+ ++++D C +
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLPV--------DSGEVKLDDEPPNSGGGSPCEAGEE 222
Query: 551 CLPSYCEHGGECSQSWDTFSCDCLGTGYTGETC 583
C +GG CS D CDC TG+ G+ C
Sbjct: 223 GEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
Score = 43.1 bits (100), Expect = 0.002
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 42/268 (15%)
Query: 706 NETHTSWGGSLPDAQK------CTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHL 759
+E S GGS +A + C G + +D Q C+C R +
Sbjct: 206 DEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCS--RTGFRGKDCSQEDNNVE 263
Query: 760 PVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCF 819
+ ++M D G+ + Y +F S F + S + E+T
Sbjct: 264 GLAHLMMGDQGKSKGKEEYIA---------TFKGSEYFCYDLSQNPIQSSSDEITLS--- 311
Query: 820 FFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPT-PFNDNQWHH 878
FKT +G+ + D++ + L+ V+ ++G+G E V+ FNDN WH
Sbjct: 312 -FKTLQRNGLMLHTGKSADYVNLALKNGA-VSLVINLGSGAFEALVEPVNGKFNDNAWHD 369
Query: 879 VRAERNVKGAS--------LQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR------ 924
V+ RN++ S + VD + D + L + ++GG+ +
Sbjct: 370 VKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQED-YTMLGSDDFFYVGGSPSTADLPGS 428
Query: 925 --QRGFLGCIRSL--QLNGVALDLEERA 948
F+GC++ + + N V L+L A
Sbjct: 429 PVSNNFMGCLKEVVYKNNDVRLELSRLA 456
Score = 35.4 bits (80), Expect = 0.35
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 20/183 (10%)
Query: 206 DVISLKFKAMQSNGILLHREGQHG--NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTL 263
D +++ F +Q +L+ + G +++ L + +GK+ N G + +
Sbjct: 1150 DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEES------ 1203
Query: 264 GSLLDDQHWHSVLIELLDTQVNFTVDKHT--HHFQAKGDSSYLDLNFEISFGGIPTPGRS 321
++++D +H V VD + A + + I GG
Sbjct: 1204 NAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKE----- 1258
Query: 322 RAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNVSF--SCPQPQTVPVTFLSSRS 379
+ + F G L LYYNG+ V +A ++ I ++GNV P T T + +S
Sbjct: 1259 ---QGQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQS 1315
Query: 380 YLA 382
++
Sbjct: 1316 EMS 1318
>gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens]
Length = 1547
Score = 219 bits (557), Expect = 2e-56
Identities = 249/1036 (24%), Positives = 430/1036 (41%), Gaps = 180/1036 (17%)
Query: 183 VVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
+ F G Y L + P++ D I+L FK +Q NG++LH G+ +++ L L G +
Sbjct: 316 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 374
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSV---------------LIELLDTQVNFT 287
+N G+ + + PV +D WH V ++ L V +
Sbjct: 375 LVINLGSGAFEALVEPVN----GKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTIS 430
Query: 288 VDKH-THHFQAKGDSSYLDLNFEISFGGIPT----PGRSRAFRRKSFHGCLENLYYNGVD 342
VD T + D + L + GG P+ PG + +F GCL+ + Y D
Sbjct: 431 VDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS---NNFMGCLKEVVYKNND 487
Query: 343 V----TELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQ 397
V + LAK+ P++ + G V+F C T+ P+TF + S+++LP + + S++F
Sbjct: 488 VRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFD 547
Query: 398 FRTWNRAGHLLF--GELRRGSGS----------FVLFLKDGKLKLSLFQPGQSPRNVTAG 445
FRT G +LF G+ R + F + + DG L L L + +
Sbjct: 548 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 607
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDD--DTAVQPLVAVLIDSGDTYYFGGCLDNSSGSGC 503
+NDG+W+ V F + V+ P + ++D D Y GG +N +G
Sbjct: 608 KKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVF 667
Query: 504 KSPLG------GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDR-CLPSYC 556
+ + G+ GC+R + I ++ D + Q + S ++ T + CL + C
Sbjct: 668 PTEVWTALLNYGYVGCIRDLFIDGQSKD--IRQMAEVQSTAGVKPSCSKETAKPCLSNPC 725
Query: 557 EHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLG 616
++ G C W+ + CDC GTGY G +SCE + DGS
Sbjct: 726 KNNGMCRDGWNRYVCDCSGTGYLG---------RSCEREAT--------VLSYDGS---- 764
Query: 617 PFLVYCNMTADAAWTVVQHGGPDAVTLRGAP---------SGHPRSAVSFAYAAGAGQLR 667
M VV H + V+LR + SA + AG+++
Sbjct: 765 -------MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVK 817
Query: 668 SAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHT--------SWGGSLPDA 719
VNL + + C +++ P+ T + + NE HT S ++ D
Sbjct: 818 LTVNL-----DCIRINCNSSKGPE----TLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQ 868
Query: 720 QKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYT 779
Q T + G+ +++ N + G +++++ +L + + G S
Sbjct: 869 QAMTGQMAGDHTRLEFH-NIETG---------IITERRYL--SSVPSNFIGHLQSLTFNG 916
Query: 780 LGPL-LCR-GDQSFW-------------NSASFNTETSYLHFPAFHGELTADVCFFFKTT 824
+ + LC+ GD + + +F T++SY+ + + F FKTT
Sbjct: 917 MAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTT 976
Query: 825 VSSGVFMENLGI-TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAER 883
G+ + N G DFI +EL + + FD+GNG + S P NDNQWH+V R
Sbjct: 977 SLDGLILYNSGDGNDFIVVEL-VKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISR 1035
Query: 884 NVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR-----------QRGFLGCI 932
+ ++L ++ K+ G L L S L+IGG A + GF GC+
Sbjct: 1036 DT--SNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCL 1093
Query: 933 RSLQLNGVALDLEERATVTPG-VEPGCAGHCST-YGHLCRNGGRCREKRRGVTCDCAFSA 990
S+ LNG DL A G +E GC G +T C N G C ++ G +CDC+ ++
Sbjct: 1094 ASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTS 1153
Query: 991 YDGPFCSNEISAYFAT--GSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRT 1048
+ GP C++ + Y + G +TY + + S + + + + F T
Sbjct: 1154 FSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRA---------------DRLAIGFST 1198
Query: 1049 TRTPSLLLYV--SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKN--MADGQLH 1104
+ ++L+ V SS +YL + + + G + +++ + D + N + DG+ H
Sbjct: 1199 VQKEAVLVRVDSSSGLGDYLELHI-HQGKIGVKFNV----GTDDIAIEESNAIINDGKYH 1253
Query: 1105 QVKINREEAVVMVEVN 1120
V+ R ++V+
Sbjct: 1254 VVRFTRSGGNATLQVD 1269
Score = 118 bits (296), Expect = 3e-26
Identities = 116/419 (27%), Positives = 182/419 (43%), Gaps = 21/419 (5%)
Query: 177 CAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + +L DV SL+F++ ++ GIL+ + + + LE
Sbjct: 752 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 810
Query: 236 LIKGKLVFFLNSGNAKLP--STIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVD-KHT 292
L G++ +N ++ S+ P TL G L+D WH+V + + TVD +
Sbjct: 811 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 870
Query: 293 HHFQAKGDSSYLDL-NFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHK 351
Q GD + L+ N E GI T R + +F G L++L +NG+ +L K
Sbjct: 871 MTGQMAGDHTRLEFHNIET---GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGD 927
Query: 352 PQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGE 411
+ N F PVTF + SY+AL + + FQF+T + G +L+
Sbjct: 928 IDYCEL-NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNS 986
Query: 412 LRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVVV 469
G+ V+ L G L +F G + + LND QWH+V S S+++ V
Sbjct: 987 -GDGNDFIVVELVKGYLHY-VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVK 1044
Query: 470 DDDTAVQPLVAVL--IDSGDTYYFGGCLDNSSGSGCK--SPLGGFQGCLRLITIGDKAVD 525
D + A +D Y GG + S K GFQGCL + + + D
Sbjct: 1045 IDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD 1104
Query: 526 PILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q WD FSCDC T ++G C+
Sbjct: 1105 LI---SDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1160
Score = 67.8 bits (164), Expect = 6e-11
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 800 ETSYLHFPAFHGELTADVCFFFKTTVSSGV--FMENLGITDFIRIELRAPTEVTFSFDVG 857
E + FP ++ +++ F KT + G+ + ++ G DF+ + L + SF +
Sbjct: 37 EGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIF 96
Query: 858 NGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLF 917
T+ + TP ND WH VR R + +L +DQ+ K + + + S LF
Sbjct: 97 CAE-PATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRR-DMTVFSGLF 154
Query: 918 IGG--------------TATRQR-GFLGCIRSLQLNGV--------ALDLEERATVTPGV 954
+GG + R+R F G IR +++N + L++ + G
Sbjct: 155 VGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGG 214
Query: 955 EPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEI 1000
P AG G +C NGG C CDC+ + + G CS EI
Sbjct: 215 SPCEAGE-EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEI 259
Score = 47.0 bits (110), Expect = 1e-04
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 34/217 (15%)
Query: 394 VTFQFRTWNRAGHLLFGELRRGSGSFV--LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDG 451
++FQ +T + G +L+ + G F+ + + G+L+LS P + A +NDG
Sbjct: 54 MSFQLKTRSARGLVLYFD-DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDG 112
Query: 452 QWHSVSFSAKWSHMNVVVDDDTAVQPLVA-----VLIDSGDTYYFGGCLDNSSGSGCKSP 506
WHSV ++ + + +D A V + + SG + GG + K
Sbjct: 113 AWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSG--LFVGGLPPELRAAALKLT 170
Query: 507 LGG------FQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDS----------CGITDR 550
L F+G +R + + V P+ ++++D C +
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLPV--------DSGEVKLDDEPPNSGGGSPCEAGEE 222
Query: 551 CLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSL 587
C +GG CS D CDC TG+ G+ C +
Sbjct: 223 GEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEI 259
Score = 32.7 bits (73), Expect = 2.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 329 FHGCLENLYYNGVDVTELAKKHKPQILMMGNVSF--SCPQPQTVPVTFLSSRSYLA 382
F G L LYYNG+ V +A ++ I ++GNV P T T + +S ++
Sbjct: 1333 FQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMS 1388
Score = 31.6 bits (70), Expect = 5.1
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQ 894
G+ D++ + + ++ F+VG + +S ND ++H VR R+ A+LQVD
Sbjct: 1213 GLGDYLELHIHQG-KIGVKFNVGTDDIAIE-ESNAIINDGKYHVVRFTRSGGNATLQVDS 1270
Query: 895 LPQ-KMQPAPADGHVRLQLNSQ 915
P + PA + + RL + Q
Sbjct: 1271 WPVIERYPAGNNDNERLAIARQ 1292
>gi|239752499 PREDICTED: similar to cell recognition molecule Caspr2,
partial [Homo sapiens]
Length = 140
Score = 144 bits (364), Expect = 4e-34
Identities = 73/74 (98%), Positives = 73/74 (98%)
Query: 1074 GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGT 1133
GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQS KKQVILSSGT
Sbjct: 2 GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGT 61
Query: 1134 EFNAVKSLILGKVL 1147
EFNAVKSLILGKVL
Sbjct: 62 EFNAVKSLILGKVL 75
>gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens]
Length = 1642
Score = 139 bits (350), Expect = 2e-32
Identities = 121/447 (27%), Positives = 192/447 (42%), Gaps = 62/447 (13%)
Query: 183 VVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
V F G Y L P++ D I+L F+ +Q NG++LH G+ +++ L L G +
Sbjct: 265 VATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVW 323
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIE--------LLDTQVNFTVDKH-TH 293
+N G+ + + PV +D WH V + + V +VD T
Sbjct: 324 LVINLGSGAFEALVEPVN----GKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTT 379
Query: 294 HFQAKGDSSYLDLNFEISFGGIPT----PGRSRAFRRKSFHGCLENLYYNGVD----VTE 345
+ D + L + GG P PG + +F GCL+++ Y D ++
Sbjct: 380 TGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVS---NNFMGCLKDVVYKNNDFKLELSR 436
Query: 346 LAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRA 404
LAK+ P++ + G++SF C + PVTF S +++ALP S + S++ FRT
Sbjct: 437 LAKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPN 496
Query: 405 GHLLFGELRRGSGS------------FVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQ 452
G LLF + RR G F + L DG L L L + + +NDG+
Sbjct: 497 GLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASSRKVNDGE 556
Query: 453 WHSVSFSAKWSHMNVVVDDDTAVQPLVAV----LIDSGDTYYFGGCLDNSSGSGCKSPL- 507
W V F ++ V+ + P +A ++D Y GG + G PL
Sbjct: 557 WCHVDFQRDGRKGSISVNSRST--PFLATGDSEILDLESELYLGGLPE---GGRVDLPLP 611
Query: 508 ---------GGFQGCLRLITIGDKAVD--PILVQQGALGSFRDLQIDSCGITDRCLPSYC 556
G+ GC+R + I ++ D + QGA+G S +C + C
Sbjct: 612 PEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGV---APFCSRETLKQCASAPC 668
Query: 557 EHGGECSQSWDTFSCDCLGTGYTGETC 583
+GG C + W+ F CDC+GTG+ G C
Sbjct: 669 RNGGVCREGWNRFICDCIGTGFLGRVC 695
Score = 117 bits (292), Expect = 9e-26
Identities = 113/415 (27%), Positives = 172/415 (41%), Gaps = 23/415 (5%)
Query: 177 CAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + L DV SL+F + ++ G+++ + + + LE
Sbjct: 695 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 753
Query: 236 LIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHF 295
L G++ +N G P TL G L+D WH+V + + +VD T
Sbjct: 754 LDGGQMKLTVNLGKG-------PETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEG 806
Query: 296 QAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQIL 355
Q G +++ L F GI T R + +F G L L +NG + K
Sbjct: 807 QMAG--AHMRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYC 864
Query: 356 MMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRG 415
+ N F PVTF S SYLAL + + FQF+T G LLF G
Sbjct: 865 EL-NARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS-GNG 922
Query: 416 SGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVV-VDDD 472
+ V+ L G + +F G P + + +ND QWH+V S +++ + +D
Sbjct: 923 NDFIVIELVKGYIHY-VFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSR 981
Query: 473 TAVQPLVAVL-IDSGDTYYFGGCLDNSSGSGCK--SPLGGFQGCLRLITIGDKAVDPILV 529
T Q +D Y GG N + K + GFQGCL + + + D I
Sbjct: 982 TVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIA- 1040
Query: 530 QQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
AL ++ G + C C + G C Q WD F+CDC T Y G C+
Sbjct: 1041 --DALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCN 1093
Score = 111 bits (278), Expect = 4e-24
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 43/345 (12%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI-TDFIRIELRAPTEVTFSF 854
+F + +SYL + + F FKTT G+ + N G DFI IEL + + F
Sbjct: 881 TFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIEL-VKGYIHYVF 939
Query: 855 DVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNS 914
D+GNGP + S P NDNQWH+V R+ ++ ++ + ++G L L
Sbjct: 940 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRD--PGNVHTLKIDSRTVTQHSNGARNLDLKG 997
Query: 915 QLFIGGTA-----------TRQRGFLGCIRSLQLNGVALDLEERATVTPG-VEPGCAGHC 962
+L+IGG + + GF GC+ S+ LNG DL A G VE GC G
Sbjct: 998 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1057
Query: 963 ST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAY-FATGSSMTYHFQEHYTL 1020
+T C N G C ++ G TCDC ++Y GP C++ + Y F G ++ YT
Sbjct: 1058 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI-----TYTW 1112
Query: 1021 SENSSSLVSSLHRDVTLTR-EMITLSFRTTRTPSLLLYV--SSFYEEYLSVILANNGSLQ 1077
N D TR + + + F T + ++L+ V +S +YL + + + G++
Sbjct: 1113 PPN----------DRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVG 1161
Query: 1078 IRYKLDRHQNPDAFTFDFKN--MADGQLHQVKINREEAVVMVEVN 1120
+ + + D T D N ++DG+ H V+ R ++V+
Sbjct: 1162 VIFNV----GTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1202
Score = 77.4 bits (189), Expect = 8e-14
Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 63/373 (16%)
Query: 788 DQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI----------- 836
D + + +F + +++ P + + T + F+TT +G+ + + G
Sbjct: 457 DVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGGGAGSHSS 516
Query: 837 ---TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVD 893
D+ +EL + D+G+G ++ S ND +W HV +R+ + S+ V+
Sbjct: 517 AQRADYFAMEL-LDGHLYLLLDMGSGGIKLRASS-RKVNDGEWCHVDFQRDGRKGSISVN 574
Query: 894 QLPQKMQPAPADGHVR-LQLNSQLFIGG----------------TATRQRGFLGCIRSLQ 936
+ P A G L L S+L++GG TA + G++GC+R L
Sbjct: 575 S---RSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLF 631
Query: 937 LNGVALDLEERATV--TPGVEPGCAGH----CSTYGHLCRNGGRCREKRRGVTCDCAFSA 990
++G + DL A GV P C+ C++ CRNGG CRE CDC +
Sbjct: 632 IDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAP--CRNGGVCREGWNRFICDCIGTG 689
Query: 991 YDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTR 1050
+ G C E + GS L +++H + E ++L F + R
Sbjct: 690 FLGRVCEREATVLSYDGSMYM------------KIMLPNAMHTEA----EDVSLRFMSQR 733
Query: 1051 TPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINR 1110
L++ +S E + Q++ ++ + P+ F + D + H V++ R
Sbjct: 734 AYGLMMATTS--RESADTLRLELDGGQMKLTVNLGKGPETL-FAGHKLNDNEWHTVRVVR 790
Query: 1111 EEAVVMVEVNQST 1123
+ + V+ T
Sbjct: 791 RGKSLQLSVDNVT 803
Score = 57.4 bits (137), Expect = 9e-08
Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 36/218 (16%)
Query: 864 TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG--- 920
T+Q TP D++WH V R+ + +L VD + +Q+ S LF+GG
Sbjct: 100 TLQLDTPVADDRWHMVLLTRDARRTALAVD--GEARAAEVRSKRREMQVASDLFVGGIPP 157
Query: 921 ----------TATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGH-----CSTY 965
T + F G + +L+L ER G + G G C+
Sbjct: 158 DVRLSALTLSTVKYEPPFRGLLANLKLG-------ERPPALLGSQ-GLRGATADPLCAPA 209
Query: 966 GHLCRNGGRCREKRRG-VTCDCAFSAYDGPFCSNEI-----SAYFATGSSMTYHFQEHYT 1019
+ C NGG C G V CDC+ + + G FCS E A+ S F T
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEGKEEFVA--T 267
Query: 1020 LSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLY 1057
N H + + + ITL+FRT + L+L+
Sbjct: 268 FKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLH 305
Score = 49.7 bits (117), Expect = 2e-05
Identities = 91/383 (23%), Positives = 146/383 (38%), Gaps = 75/383 (19%)
Query: 808 AFHGELTADVCFFFKTTVSSGVFMENLG--ITDFIRIELRAPTEVTFSFDVGNGPCEVTV 865
A H E DV F + + G+ M D +R+EL ++ + ++G GP T+
Sbjct: 717 AMHTE-AEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG-QMKLTVNLGKGP--ETL 772
Query: 866 QSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQ 925
+ NDN+WH VR R K L VD + + Q A A H+RL+ ++ G T +
Sbjct: 773 FAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMAGA--HMRLEFHN--IETGIMTER 828
Query: 926 R-------GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREK 978
R F+G + L NG P ++ C TY L R
Sbjct: 829 RFISVVPSNFIGHLSGLVFNG-----------QPYMDQ-CKDGDITYCEL-----NARFG 871
Query: 979 RRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLT 1038
R + D P S+Y A + Y +S+H
Sbjct: 872 LRAIVAD--------PVTFKSRSSYLALATLQAY----------------ASMH------ 901
Query: 1039 REMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDF-KN 1097
+ F+TT LLL+ S +++ + L I Y D P + K
Sbjct: 902 ---LFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG---YIHYVFDLGNGPSLMKGNSDKP 955
Query: 1098 MADGQLHQVKINREEA-VVMVEVNQSTKKQVILSSGTEFNAVK-SLILGKVLEAAGADPD 1155
+ D Q H V ++R+ V ++++ T Q S+G +K L +G + + ++
Sbjct: 956 VNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ--HSNGARNLDLKGELYIGGLSKNMFSNLP 1013
Query: 1156 TRRAATSGFTGCLSAVRFGRAAP 1178
A+ GF GCL++V P
Sbjct: 1014 KLVASRDGFQGCLASVDLNGRLP 1036
Score = 40.0 bits (92), Expect = 0.014
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 814 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPT-PFN 872
T ++ F+T +G+ + D++ + L++ V ++G+G E V+ FN
Sbjct: 287 TDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGA-VWLVINLGSGAFEALVEPVNGKFN 345
Query: 873 DNQWHHVRAERNVK 886
DN WH VR RN++
Sbjct: 346 DNAWHDVRVTRNLR 359
Score = 38.9 bits (89), Expect = 0.032
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 1042 ITLSFRTTRTPSLLLYVSSFYE-EYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMAD 1100
++ S RT T +LLLY+ + ++L ++L + G L++R+ L + P D +AD
Sbjct: 53 LSFSLRTNATRALLLYLDDGGDCDFLELLLVD-GRLRLRFTLSCAE-PATLQLDTP-VAD 109
Query: 1101 GQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAA 1160
+ H V + R+ + V+ + + S E L +G G PD R +A
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVG------GIPPDVRLSA 163
Query: 1161 TS--------GFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMAR-CAAG 1206
+ F G L+ ++ G P A L G T AP CA G
Sbjct: 164 LTLSTVKYEPPFRGLLANLKLGERPP--ALLGSQGLRGATADPLCAPARNPCANG 216
Score = 36.2 bits (82), Expect = 0.21
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPF-NDNQWHHVRAERNVKGASLQVD 893
G+ D++++ + T V F+VG ++T+ P +D ++H VR R+ A+LQVD
Sbjct: 1146 GLGDYLQLHIDQGT-VGVIFNVGTD--DITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1202
Query: 894 QLP-QKMQPAPADGHVRLQLNSQLFIG-GTATRQRGFLGCIRSLQLNGV 940
P + PA G NSQ I G + R F G + L NG+
Sbjct: 1203 SWPVNERYPA---GRQLTIFNSQAAIKIGGRDQGRPFQGQVSGLYYNGL 1248
Score = 35.0 bits (79), Expect = 0.46
Identities = 48/219 (21%), Positives = 80/219 (36%), Gaps = 23/219 (10%)
Query: 386 NSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAG 445
+SGE ++F RT LL+ + L L DG+L+L P +
Sbjct: 49 SSGE----LSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLD 104
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVL--IDSGDTYYFGGCLDNSSGSGC 503
+ D +WH V + + VD + + + + + GG + S
Sbjct: 105 TPVADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSAL 164
Query: 504 KSPL----GGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSY--CE 557
F+G L + +G++ +L QG G+ D C P+ C
Sbjct: 165 TLSTVKYEPPFRGLLANLKLGERP-PALLGSQGLRGATAD---------PLCAPARNPCA 214
Query: 558 HGGECS-QSWDTFSCDCLGTGYTGETCHSSLYEQSCEAH 595
+GG C+ + CDC TG+ G+ C + AH
Sbjct: 215 NGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAH 253
Score = 33.1 bits (74), Expect = 1.8
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 241 LVFFLNSGNAKLPSTIA---PVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQA 297
L L G +L T++ P TL L + + D WH VL+ + VD +
Sbjct: 78 LELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRDARRTALAVDGEARAAEV 137
Query: 298 KGDSSYLDLNFEISFGGIPTPGRSRAFRRKS------FHGCLENL 336
+ + + ++ GGIP R A + F G L NL
Sbjct: 138 RSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLANL 182
>gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens]
Length = 1712
Score = 138 bits (348), Expect = 3e-32
Identities = 122/454 (26%), Positives = 193/454 (42%), Gaps = 69/454 (15%)
Query: 183 VVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGKLV 242
V F G Y L P++ D I+L F+ +Q NG++LH G+ +++ L L G +
Sbjct: 289 VATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVW 347
Query: 243 FFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSV---------------LIELLDTQVNFT 287
+N G+ + + PV +D WH V ++ L V +
Sbjct: 348 LVINLGSGAFEALVEPVN----GKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTIS 403
Query: 288 VDKH-THHFQAKGDSSYLDLNFEISFGGIPT----PGRSRAFRRKSFHGCLENLYYNGVD 342
VD T + D + L + GG P PG + +F GCL+++ Y D
Sbjct: 404 VDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVS---NNFMGCLKDVVYKNND 460
Query: 343 ----VTELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLALPGNSGEDKVSVTFQ 397
++ LAK+ P++ + G++SF C + PVTF S +++ALP S + S++
Sbjct: 461 FKLELSRLAKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLD 520
Query: 398 FRTWNRAGHLLFGELRRGSGS------------FVLFLKDGKLKLSLFQPGQSPRNVTAG 445
FRT G LLF + RR G F + L DG L L L + +
Sbjct: 521 FRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASS 580
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAV----LIDSGDTYYFGGCLDNSSGS 501
+NDG+W V F ++ V+ + P +A ++D Y GG + G
Sbjct: 581 RKVNDGEWCHVDFQRDGRKGSISVNSRST--PFLATGDSEILDLESELYLGGLPE---GG 635
Query: 502 GCKSPL----------GGFQGCLRLITIGDKAVD--PILVQQGALGSFRDLQIDSCGITD 549
PL G+ GC+R + I ++ D + QGA+G S
Sbjct: 636 RVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGV---APFCSRETLK 692
Query: 550 RCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETC 583
+C + C +GG C + W+ F CDC+GTG+ G C
Sbjct: 693 QCASAPCRNGGVCREGWNRFICDCIGTGFLGRVC 726
Score = 114 bits (286), Expect = 5e-25
Identities = 114/418 (27%), Positives = 175/418 (41%), Gaps = 20/418 (4%)
Query: 177 CAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ V+ +DG + L DV SL+F + ++ G+++ + + + LE
Sbjct: 726 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 784
Query: 236 LIKGKLVFFLNSGNAKL---PSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHT 292
L G++ +N ++ PS P TL G L+D WH+V + + +VD T
Sbjct: 785 LDGGQMKLTVNLDCLRVGCAPSK-GPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVT 843
Query: 293 HHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKP 352
Q G +++ L F GI T R + +F G L L +NG + K
Sbjct: 844 VEGQMAG--AHMRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDI 901
Query: 353 QILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL 412
+ N F PVTF S SYLAL + + FQF+T G LLF
Sbjct: 902 TYCEL-NARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNS- 959
Query: 413 RRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVV-V 469
G+ V+ L G + +F G P + + +ND QWH+V S +++ + +
Sbjct: 960 GNGNDFIVIELVKGYIHY-VFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKI 1018
Query: 470 DDDTAVQPLVAVL-IDSGDTYYFGGCLDNSSGSGCK--SPLGGFQGCLRLITIGDKAVDP 526
D T Q +D Y GG N + K + GFQGCL + + + D
Sbjct: 1019 DSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDL 1078
Query: 527 ILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q WD F+CDC T Y G C+
Sbjct: 1079 IA---DALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCN 1133
Score = 111 bits (278), Expect = 4e-24
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 43/345 (12%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI-TDFIRIELRAPTEVTFSF 854
+F + +SYL + + F FKTT G+ + N G DFI IEL + + F
Sbjct: 921 TFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIEL-VKGYIHYVF 979
Query: 855 DVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNS 914
D+GNGP + S P NDNQWH+V R+ ++ ++ + ++G L L
Sbjct: 980 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRD--PGNVHTLKIDSRTVTQHSNGARNLDLKG 1037
Query: 915 QLFIGGTA-----------TRQRGFLGCIRSLQLNGVALDLEERATVTPG-VEPGCAGHC 962
+L+IGG + + GF GC+ S+ LNG DL A G VE GC G
Sbjct: 1038 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGPS 1097
Query: 963 ST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAY-FATGSSMTYHFQEHYTL 1020
+T C N G C ++ G TCDC ++Y GP C++ + Y F G ++ YT
Sbjct: 1098 TTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI-----TYTW 1152
Query: 1021 SENSSSLVSSLHRDVTLTR-EMITLSFRTTRTPSLLLYV--SSFYEEYLSVILANNGSLQ 1077
N D TR + + + F T + ++L+ V +S +YL + + + G++
Sbjct: 1153 PPN----------DRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVG 1201
Query: 1078 IRYKLDRHQNPDAFTFDFKN--MADGQLHQVKINREEAVVMVEVN 1120
+ + + D T D N ++DG+ H V+ R ++V+
Sbjct: 1202 VIFNV----GTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1242
Score = 76.6 bits (187), Expect = 1e-13
Identities = 84/380 (22%), Positives = 153/380 (40%), Gaps = 68/380 (17%)
Query: 788 DQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI----------- 836
D + + +F + +++ P + + T + F+TT +G+ + + G
Sbjct: 488 DVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGGGAGSHSS 547
Query: 837 ---TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVD 893
D+ +EL + D+G+G ++ S ND +W HV +R+ + S+ V+
Sbjct: 548 AQRADYFAMEL-LDGHLYLLLDMGSGGIKLRASS-RKVNDGEWCHVDFQRDGRKGSISVN 605
Query: 894 QLPQKMQPAPADGHVR-LQLNSQLFIGG----------------TATRQRGFLGCIRSLQ 936
+ P A G L L S+L++GG TA + G++GC+R L
Sbjct: 606 S---RSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLF 662
Query: 937 LNGVALDLEERATV--TPGVEPGCAGH----CSTYGHLCRNGGRCREKRRGVTCDCAFSA 990
++G + DL A GV P C+ C++ CRNGG CRE CDC +
Sbjct: 663 IDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAP--CRNGGVCREGWNRFICDCIGTG 720
Query: 991 YDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTR 1050
+ G C E + GS L +++H + E ++L F + R
Sbjct: 721 FLGRVCEREATVLSYDGSMYM------------KIMLPNAMHTEA----EDVSLRFMSQR 764
Query: 1051 TPSLLLYVSSFYEEYLSVILANNGSLQIRYKLD-------RHQNPDAFTFDFKNMADGQL 1103
L++ +S + + G +++ LD + P+ F + D +
Sbjct: 765 AYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETL-FAGHKLNDNEW 823
Query: 1104 HQVKINREEAVVMVEVNQST 1123
H V++ R + + V+ T
Sbjct: 824 HTVRVVRRGKSLQLSVDNVT 843
Score = 50.8 bits (120), Expect = 8e-06
Identities = 57/240 (23%), Positives = 92/240 (38%), Gaps = 56/240 (23%)
Query: 864 TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG--- 920
T+Q TP D++WH V R+ + +L VD + +Q+ S LF+GG
Sbjct: 100 TLQLDTPVADDRWHMVLLTRDARRTALAVD--GEARAAEVRSKRREMQVASDLFVGGIPP 157
Query: 921 ----------TATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGH-----CSTY 965
T + F G + +L+L ER G + G G C+
Sbjct: 158 DVRLSALTLSTVKYEPPFRGLLANLKLG-------ERPPALLGSQ-GLRGATADPLCAPA 209
Query: 966 GHLCRNGGRCREKRRG-VTCDCAFSAYDGPFCSNEI----------------SAYFATGS 1008
+ C NGG C G V CDC+ + + G FCS E S F+ G
Sbjct: 210 RNPCANGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGG 269
Query: 1009 SMTYHFQEHYTLSENSSSLVSSL-----------HRDVTLTREMITLSFRTTRTPSLLLY 1057
+ + + ++ V++ H + + + ITL+FRT + L+L+
Sbjct: 270 AGRGGAGDVHQPTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLH 329
Score = 45.8 bits (107), Expect = 3e-04
Identities = 93/389 (23%), Positives = 147/389 (37%), Gaps = 78/389 (20%)
Query: 808 AFHGELTADVCFFFKTTVSSGVFMENLG--ITDFIRIELRA-PTEVTFSFD---VGNGPC 861
A H E DV F + + G+ M D +R+EL ++T + D VG P
Sbjct: 748 AMHTE-AEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPS 806
Query: 862 E--VTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIG 919
+ T+ + NDN+WH VR R K L VD + + Q A A H+RL+ ++
Sbjct: 807 KGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMAGA--HMRLEFHN--IET 862
Query: 920 GTATRQR-------GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNG 972
G T +R F+G + L NG P ++ C TY L
Sbjct: 863 GIMTERRFISVVPSNFIGHLSGLVFNG-----------QPYMDQ-CKDGDITYCEL---- 906
Query: 973 GRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLH 1032
R R + D P S+Y A + Y +S+H
Sbjct: 907 -NARFGLRAIVAD--------PVTFKSRSSYLALATLQAY----------------ASMH 941
Query: 1033 RDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFT 1092
+ F+TT LLL+ S +++ + L I Y D P
Sbjct: 942 ---------LFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG---YIHYVFDLGNGPSLMK 989
Query: 1093 FDF-KNMADGQLHQVKINREEA-VVMVEVNQSTKKQVILSSGTEFNAVK-SLILGKVLEA 1149
+ K + D Q H V ++R+ V ++++ T Q S+G +K L +G + +
Sbjct: 990 GNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ--HSNGARNLDLKGELYIGGLSKN 1047
Query: 1150 AGADPDTRRAATSGFTGCLSAVRFGRAAP 1178
++ A+ GF GCL++V P
Sbjct: 1048 MFSNLPKLVASRDGFQGCLASVDLNGRLP 1076
Score = 40.0 bits (92), Expect = 0.014
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 814 TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPT-PFN 872
T ++ F+T +G+ + D++ + L++ V ++G+G E V+ FN
Sbjct: 311 TDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGA-VWLVINLGSGAFEALVEPVNGKFN 369
Query: 873 DNQWHHVRAERNVK 886
DN WH VR RN++
Sbjct: 370 DNAWHDVRVTRNLR 383
Score = 38.9 bits (89), Expect = 0.032
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 1042 ITLSFRTTRTPSLLLYVSSFYE-EYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMAD 1100
++ S RT T +LLLY+ + ++L ++L + G L++R+ L + P D +AD
Sbjct: 53 LSFSLRTNATRALLLYLDDGGDCDFLELLLVD-GRLRLRFTLSCAE-PATLQLDTP-VAD 109
Query: 1101 GQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAA 1160
+ H V + R+ + V+ + + S E L +G G PD R +A
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVG------GIPPDVRLSA 163
Query: 1161 TS--------GFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMAR-CAAG 1206
+ F G L+ ++ G P A L G T AP CA G
Sbjct: 164 LTLSTVKYEPPFRGLLANLKLGERPP--ALLGSQGLRGATADPLCAPARNPCANG 216
Score = 37.0 bits (84), Expect = 0.12
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 23/237 (9%)
Query: 386 NSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAG 445
+SGE ++F RT LL+ + L L DG+L+L P +
Sbjct: 49 SSGE----LSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLD 104
Query: 446 AGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVL--IDSGDTYYFGGCLDNSSGSGC 503
+ D +WH V + + VD + + + + + GG + S
Sbjct: 105 TPVADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSAL 164
Query: 504 KSPL----GGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSY--CE 557
F+G L + +G++ +L QG G+ D C P+ C
Sbjct: 165 TLSTVKYEPPFRGLLANLKLGERP-PALLGSQGLRGATAD---------PLCAPARNPCA 214
Query: 558 HGGECS-QSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 613
+GG C+ + CDC TG+ G+ C + AH + G G+G
Sbjct: 215 NGGLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGGAG 271
Score = 33.1 bits (74), Expect = 1.8
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 241 LVFFLNSGNAKLPSTIA---PVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQA 297
L L G +L T++ P TL L + + D WH VL+ + VD +
Sbjct: 78 LELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHMVLLTRDARRTALAVDGEARAAEV 137
Query: 298 KGDSSYLDLNFEISFGGIPTPGRSRAFRRKS------FHGCLENL 336
+ + + ++ GGIP R A + F G L NL
Sbjct: 138 RSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLANL 182
Score = 32.0 bits (71), Expect = 3.9
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPF-NDNQWHHVRAERNVKGASLQVD 893
G+ D++++ + T V F+VG ++T+ P +D ++H VR R+ A+LQVD
Sbjct: 1186 GLGDYLQLHIDQGT-VGVIFNVGTD--DITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1242
Query: 894 QLP-QKMQPAPADGHVRLQLNSQ 915
P + PA + RL + Q
Sbjct: 1243 SWPVNERYPAGNFDNERLAIARQ 1265
>gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens]
Length = 1061
Score = 112 bits (279), Expect = 3e-24
Identities = 107/418 (25%), Positives = 176/418 (42%), Gaps = 20/418 (4%)
Query: 177 CAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHG-NHITLE 235
C ++ ++ +DG + + DV S +F + ++ G+L+ + + + LE
Sbjct: 306 CEREASILSYDGSMYMKIIMPMVMHTEAEDV-SFRFMSQRAYGLLVATTSRDSADTLRLE 364
Query: 236 LIKGKLVFFLNSGNAKLP--STIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTH 293
L G++ +N ++ S+ P TL G L+D WH+V + + TVD
Sbjct: 365 LDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVA 424
Query: 294 HFQAKGDSSYLDL-NFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKP 352
GD + L+ N E GI T R + SF G L++L +NG+ +L K
Sbjct: 425 EGTMVGDHTRLEFHNIET---GIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDI 481
Query: 353 QILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGEL 412
+ F PVTF + SYL+L + + FQF+T + G +LF
Sbjct: 482 DYCEL-KARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNS- 539
Query: 413 RRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAG--LNDGQWHSVSFSAKWSHMNVVVD 470
G+ + L G + +F G P + + LND QWH+V + S+ + +
Sbjct: 540 GDGNDFIAVELVKGYIHY-VFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKV 598
Query: 471 DDTAVQPLV--AVLIDSGDTYYFGGCLDNSSGSGCK--SPLGGFQGCLRLITIGDKAVDP 526
D V ++ A +D Y G + K + GFQGCL + + + D
Sbjct: 599 DTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDL 658
Query: 527 ILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCH 584
I AL ++ G + C C + G C Q W+ F+CDC T Y+G C+
Sbjct: 659 I---NDALHRSGQIERGCEGPSTTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCN 713
Score = 110 bits (276), Expect = 7e-24
Identities = 98/342 (28%), Positives = 149/342 (43%), Gaps = 37/342 (10%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI-TDFIRIELRAPTEVTFSF 854
+F T++SYL + + F FKTT G + N G DFI +EL + + F
Sbjct: 501 TFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVEL-VKGYIHYVF 559
Query: 855 DVGNGPCEVTVQSPTPFNDNQWHHVRAER-NVKGASLQVDQLPQKMQPAPADGHVRLQLN 913
D+GNGP + S P NDNQWH+V R N SL+VD K+ +G L L
Sbjct: 560 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVD---TKVVTQVINGAKNLDLK 616
Query: 914 SQLFIGGTA-----------TRQRGFLGCIRSLQLNGVALDLEERATVTPG-VEPGCAGH 961
L++ G A + GF GC+ S+ LNG DL A G +E GC G
Sbjct: 617 GDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGP 676
Query: 962 CST-YGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYF--ATGSSMTYHFQEHY 1018
+T C N G C ++ G TCDC+ ++Y G C++ + Y +G + Y + +
Sbjct: 677 STTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPAND 736
Query: 1019 TLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQI 1078
S S L T ++ I + R P L ++ E+ ++ N G++ I
Sbjct: 737 RPSTRSDRLAVGFS---TTVKDGILV--RIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDI 791
Query: 1079 RYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVN 1120
K +R + DG+ H V+ R ++V+
Sbjct: 792 SIKEER-----------TPVNDGKYHVVRFTRNGGNATLQVD 822
Score = 84.7 bits (208), Expect = 5e-16
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 328 SFHGCLENLYYNGVDV----TELAKKHKPQILMMGNVSFSCPQPQTV-PVTFLSSRSYLA 382
+F GCL+ + Y D+ + LA+ ++ + G V F C T+ P+ F + +Y++
Sbjct: 27 NFMGCLKEVVYKNNDIRLELSRLARIADTKMKIYGEVVFKCENVATLDPINFETPEAYIS 86
Query: 383 LPGNSGEDKVSVTFQFRTWNRAGHLLFG----ELRRGSGS--------FVLFLKDGKLKL 430
LP + + S++F FRT G +LF + R+ + S F + L DG L L
Sbjct: 87 LPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYL 146
Query: 431 SLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLVAV----LIDSG 486
L + + NDG+W+ V + V+ P A ++D
Sbjct: 147 LLDMGSGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRT--PFTASGESEILDLE 204
Query: 487 DTYYFGGCLDNSSGSGCKSPLG------GFQGCLRLITIG--DKAVDPILVQQGALGSFR 538
Y GG +N +G + L G+ GC+R + I K + + Q A G
Sbjct: 205 GDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAG--- 261
Query: 539 DLQIDSCGITDRCLPSY-CEHGGECSQSWDTFSCDCLGTGYTGETC 583
++ ++ + SY C++ C W+ F CDC GTGY G TC
Sbjct: 262 -VKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTC 306
Score = 75.1 bits (183), Expect = 4e-13
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 796 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGI--------------TDFIR 841
+F T +Y+ P ++ + + F F+TT +G+ + G DF
Sbjct: 77 NFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFA 136
Query: 842 IELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQP 901
+EL + D+G+G +V ND +W+HV +R+ + ++ V+ + P
Sbjct: 137 VEL-LDGNLYLLLDMGSGTIKVKATQKKA-NDGEWYHVDIQRDGRSGTISVNS---RRTP 191
Query: 902 APADGHVR-LQLNSQLFIGG---------------TATRQRGFLGCIRSLQLNGVALDLE 945
A G L L +++GG TA G++GCIR L ++G + ++
Sbjct: 192 FTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIR 251
Query: 946 ERATV--TPGVEPGC----AGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNE 999
+ A + GV+ C A C +Y C+N C++ CDC + Y G C E
Sbjct: 252 QLAEMQNAAGVKSSCSRMSAKQCDSYP--CKNNAVCKDGWNRFICDCTGTGYWGRTCERE 309
Query: 1000 ISAYFATGS 1008
S GS
Sbjct: 310 ASILSYDGS 318
Score = 55.1 bits (131), Expect = 4e-07
Identities = 71/340 (20%), Positives = 122/340 (35%), Gaps = 76/340 (22%)
Query: 208 ISLKFKAMQSNGILLHREGQHGNH-------------ITLELIKGKLVFFLN--SGNAKL 252
IS F+ + NG++L G+ +EL+ G L L+ SG K+
Sbjct: 98 ISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKV 157
Query: 253 PSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISF 312
+T +D W+ V I+ +V+ F A G+S LDL ++
Sbjct: 158 KATQKKA--------NDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYL 209
Query: 313 GGIPTPGRS--------RAFRRKSFHGCLENLYYNG--VDVTELAKKHKPQILMMGNVSF 362
GG+P A + GC+ +L+ +G ++ +LA+ +
Sbjct: 210 GGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRM 269
Query: 363 SCPQPQTVPV-----------TFLSSRSYLALPGNSGEDKVS------------------ 393
S Q + P F+ + G + E + S
Sbjct: 270 SAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVM 329
Query: 394 ------VTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSL--------FQPGQSP 439
V+F+F + G L+ R + + L L G++KL + + P
Sbjct: 330 HTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGP 389
Query: 440 RNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAVQPLV 479
+ AG LND +WH+V + + + VDDD A +V
Sbjct: 390 ETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEGTMV 429
Score = 48.5 bits (114), Expect = 4e-05
Identities = 86/357 (24%), Positives = 128/357 (35%), Gaps = 84/357 (23%)
Query: 864 TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTAT 923
T+ + NDN+WH VR R K L VD + H RL+ ++ G T
Sbjct: 391 TLYAGQKLNDNEWHTVRVVRRGKSLKLTVDD--DVAEGTMVGDHTRLEFHN--IETGIMT 446
Query: 924 RQR-------GFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCR 976
+R F+G ++SL NG+ Y LC+NG
Sbjct: 447 EKRYISVVPSSFIGHLQSLMFNGL-----------------------LYIDLCKNG---- 479
Query: 977 EKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVT 1036
D +C E+ A F + + + T SS L SL
Sbjct: 480 ---------------DIDYC--ELKARFGLRNIIA----DPVTFKTKSSYL--SLATLQA 516
Query: 1037 LTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDF- 1095
T + F+TT +L+ S ++++V L I Y D P+ +
Sbjct: 517 YTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKG---YIHYVFDLGNGPNVIKGNSD 573
Query: 1096 KNMADGQLHQVKINREEA-VVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAG--- 1151
+ + D Q H V I R+ + ++V+ QVI N K+L L L AG
Sbjct: 574 RPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVI-------NGAKNLDLKGDLYMAGLAQ 626
Query: 1152 ---ADPDTRRAATSGFTGCLSAVRFGRAAP--LKAALRPSGPSRVTVRGHVAPMARC 1203
++ A+ GF GCL++V P + AL SG RG P C
Sbjct: 627 GMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIE---RGCEGPSTTC 680
Score = 43.1 bits (100), Expect = 0.002
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 821 FKTTVSSGVFME---NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWH 877
F TTV G+ + G+ DF+++ + ++ F++G + + TP ND ++H
Sbjct: 749 FSTTVKDGILVRIDSAPGLGDFLQLHIEQG-KIGVVFNIGTVDISIK-EERTPVNDGKYH 806
Query: 878 HVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQL 937
VR RN A+LQVD P +Q+ IGG + R F G + L
Sbjct: 807 VVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGG-KDKGRLFQGQLSGLYY 865
Query: 938 NGV 940
+G+
Sbjct: 866 DGL 868
Score = 35.4 bits (80), Expect = 0.35
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 22/178 (12%)
Query: 206 DVISLKFKAMQSNGILLHREGQHG--NHITLELIKGKL--VFFLNSGNAKLPSTIAPVTL 261
D +++ F +GIL+ + G + + L + +GK+ VF + + + + PV
Sbjct: 743 DRLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPV-- 800
Query: 262 TLGSLLDDQHWHSVLIELLDTQVNFTVDKH--THHFQAKGDSSYLDLNFEISFGGIPTPG 319
+D +H V VD H+ + + +I+ GG
Sbjct: 801 ------NDGKYHVVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGGKD--- 851
Query: 320 RSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSS 377
+ + F G L LYY+G+ V +A ++ P I + G+V P + T +S
Sbjct: 852 -----KGRLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSILGTTQTTS 904
>gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Homo
sapiens]
Length = 387
Score = 89.0 bits (219), Expect = 3e-17
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 31 CDAPLA---SALPRSSFSSSSELSS------SHGPGFSRLNRRDGAGGWTPLVSNKYQWL 81
C PL +++P ++SS + S P ++RL+++ W QWL
Sbjct: 230 CANPLGLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWL 289
Query: 82 QIDLGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYR--REESIWGFPGNTN 137
Q+DLG EVT + TQG +GS +V SY + +S+ NW +Y+ R S FPGN +
Sbjct: 290 QVDLGSSKEVTGIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWD 349
Query: 138 ADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
S + P AR++R LP+AW+ RI +R+E+ GC
Sbjct: 350 NHSHKKNLFETPILARYVRILPVAWH--NRIALRLELLGC 387
Score = 57.8 bits (138), Expect = 7e-08
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 17 TQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHG-PGFSRLNRRDGAGGWTPLVS 75
T+ P+G N ++ +A++ R +F L H P +RLNR WTP +
Sbjct: 68 TKCVEPLGLENGNIANSQIAASSVRVTF-----LGLQHWVPELARLNRAGMVNAWTPSSN 122
Query: 76 NKYQWLQIDLGERMEVTAVATQGG--YGSSDWVTSYLLMFSDGGRNW-------KQYRRE 126
+ W+Q++L RM VT V TQG S +++ ++ + +S G + K+++
Sbjct: 123 DDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKE- 181
Query: 127 ESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
F GN N ++V + P EA+++R P + + +R E+ GC
Sbjct: 182 -----FVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHT--ACTLRFELLGC 225
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 85.5 bits (210), Expect = 3e-16
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 31 CDAPLA---SALPRSSFSSSSELSSSHG----PGFSRLNRRDGAGGWTPLVSNKYQWLQI 83
C PL + ++SS S G P +RLN + W +N QWL+I
Sbjct: 2066 CSTPLGMENGKIENKQITASSFKKSWWGDYWEPFRARLNAQGRVNAWQAKANNNKQWLEI 2125
Query: 84 DLGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWG--FPGNTNAD 139
DL + ++TA+ TQG S +V SY + +S+ G WK YR + S+ F GNTN
Sbjct: 2126 DLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNTK 2185
Query: 140 SVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
V PP +RF+R +P WN I +R+E++GC
Sbjct: 2186 GHVKNFFNPPIISRFIRVIPKTWNQ--SIALRLELFGC 2221
Score = 60.8 bits (146), Expect = 8e-09
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 30 DCDAP--LASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWT--PLVSN--KYQWLQI 83
DC P L++ + S +SE P +RLN W+ L + W+Q+
Sbjct: 1906 DCRMPMGLSTGIISDSQIKASEFLGYWEPRLARLNNGGSYNAWSVEKLAAEFASKPWIQV 1965
Query: 84 DLGERMEVTAVATQGG--YGSSDWVTSYLLMFSDGGRNWKQYRREES--IWGFPGNTNAD 139
D+ + + +T + TQG Y S + T + + +S NW+ ++ + + F GN++A
Sbjct: 1966 DMQKEVIITGIQTQGAKHYLKSCYTTEFYVAYSSNQINWQIFKGNSTRNVMYFNGNSDAS 2025
Query: 140 SVVHYRLQPPFEARFLRFLPL-AWNPRGRIGMRIEVYGC 177
++ + PP AR++R P A+N R +R+E+ GC
Sbjct: 2026 TIKENQFDPPIVARYIRISPTRAYN---RPTLRLELQGC 2061
>gi|62420886 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 83.2 bits (204), Expect = 1e-15
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 8 VLKVLLLLPTQTWSPVGAGNPPDCDAPLASA---LPRSSFSSSSELSSSHGPGFSRLNRR 64
+L + LLLP + S NP C PL + +P ++SS+ S S + RL+
Sbjct: 8 LLVLFLLLPILS-SAKAQVNPAICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSE 66
Query: 65 DGAGGWTPLV----SNKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLLMFSDGG 117
+G G W P + + ++LQIDL +T V TQG + ++ Y + +S G
Sbjct: 67 EGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDG 126
Query: 118 RNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
W +R GN+N + L+PP ARF+RF+P+ + + MR+E+YGC
Sbjct: 127 TRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVT-DHSMNVCMRVELYGC 185
Query: 178 AYKSEVVYFD 187
+ +V ++
Sbjct: 186 VWLDGLVSYN 195
>gi|62420884 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 83.2 bits (204), Expect = 1e-15
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 8 VLKVLLLLPTQTWSPVGAGNPPDCDAPLASA---LPRSSFSSSSELSSSHGPGFSRLNRR 64
+L + LLLP + S NP C PL + +P ++SS+ S S + RL+
Sbjct: 8 LLVLFLLLPILS-SAKAQVNPAICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSE 66
Query: 65 DGAGGWTPLV----SNKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLLMFSDGG 117
+G G W P + + ++LQIDL +T V TQG + ++ Y + +S G
Sbjct: 67 EGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDG 126
Query: 118 RNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
W +R GN+N + L+PP ARF+RF+P+ + + MR+E+YGC
Sbjct: 127 TRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVT-DHSMNVCMRVELYGC 185
Query: 178 AYKSEVVYFD 187
+ +V ++
Sbjct: 186 VWLDGLVSYN 195
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 79.0 bits (193), Expect = 3e-14
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 14/227 (6%)
Query: 364 CPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFVLFL 423
C + PV RS+LA P + + +FR G LL+ RG L L
Sbjct: 1366 CEKVLGAPVPAFEGRSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALAL 1425
Query: 424 KDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTAV---QPLVA 480
DG+++L F G P +T+ + GQWH + S W + VD +T V P
Sbjct: 1426 LDGRVQLR-FDTGSGPAVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGT 1484
Query: 481 VLIDSGDTYYFGGCLDNSSGSGCKSPL--GGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
++ + GG ++ + + G +GC+RL+ + ++ ++ + G + R
Sbjct: 1485 DGLNLDTDLFVGGVPEDQAAVALERTFVGAGLRGCIRLLDVNNQRLE---LGIGPGAATR 1541
Query: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDT--FSCDCLGTGYTGETC 583
+ CG CLP+ C HGG Q+ + F C C G G TC
Sbjct: 1542 GSGVGECG-DHPCLPNPC-HGGAPCQNLEAGRFHCQC-PPGRVGPTC 1585
Score = 72.4 bits (176), Expect = 3e-12
Identities = 96/354 (27%), Positives = 139/354 (39%), Gaps = 28/354 (7%)
Query: 835 GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQ 894
G DF+ + LR + F +D+G G ++S P W V ERN + +L+V
Sbjct: 1686 GKGDFVSLALR-DRRLEFRYDLGKGAA--VIRSREPVTLGAWTRVSLERNGRKGALRVGD 1742
Query: 895 LPQKMQPAPADGHVRLQLNSQLFIGGT---------ATRQRGFLGCIRSLQLNGVALDLE 945
P+ + +P H L L L++GG A GF G I+ + L G L
Sbjct: 1743 GPRVLGESPVP-HTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTP 1801
Query: 946 ERATVTPGVEPGCAGHCSTY--GHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAY 1003
E V AGH T GH C NG C + C C + GP C +
Sbjct: 1802 EHVLRQVDVT-SFAGHPCTRASGHPCLNGASCVPREAAYVCLCP-GGFSGPHCEKGLVEK 1859
Query: 1004 FATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYE 1063
A G T F + T E +++ S + L LS RT T L+L+ E
Sbjct: 1860 SA-GDVDTLAF-DGRTFVEYLNAVTES---EKALQSNHFELSLRTEATQGLVLWSGKATE 1914
Query: 1064 EYLSVILA-NNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEV-NQ 1121
V LA +G LQ+ Y L T + +V +RE+ ++V N+
Sbjct: 1915 RADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNT---NRWLRVVAHREQREGSLQVGNE 1971
Query: 1122 STKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGR 1175
+ T+ + +L LG + E P +A +GF GCL V GR
Sbjct: 1972 APVTGSSPLGATQLDTDGALWLGGLPELP-VGPALPKAYGTGFVGCLRDVVVGR 2024
Score = 45.8 bits (107), Expect = 3e-04
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 390 DKVSVTFQFRTWNRAGHLLF-GELRRGSGSFV-LFLKDGKLKLSLFQPGQSPRNVTAGAG 447
+K+++ F +G LL+ G+ G G FV L L+D +L+ + G+ + +
Sbjct: 1660 EKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRDRRLEFR-YDLGKGAAVIRSREP 1718
Query: 448 LNDGQWHSVSFSAKWSHMNVVVDDDTAV---QPLVAVLIDSGDTYYFGGCLDNSSGSGCK 504
+ G W VS + V D V P+ +++ + Y GG D S +
Sbjct: 1719 VTLGAWTRVSLERNGRKGALRVGDGPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAA 1778
Query: 505 SPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCG--ITDRCLPSYCEHGGEC 562
+ GF G ++L+++G + +L + L R + + S R C +G C
Sbjct: 1779 AVSSGFDGAIQLVSLGGR---QLLTPEHVL---RQVDVTSFAGHPCTRASGHPCLNGASC 1832
Query: 563 SQSWDTFSCDCLGTGYTGETCHSSLYEQS 591
+ C C G G++G C L E+S
Sbjct: 1833 VPREAAYVCLCPG-GFSGPHCEKGLVEKS 1860
Score = 43.9 bits (102), Expect = 0.001
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 853 SFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQL 912
S+++G+ P V ++S P N N+W V A R + SLQV +P G +L
Sbjct: 1931 SYNLGSQP--VVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPL-GATQLDT 1987
Query: 913 NSQLFIGG----------TATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEP 956
+ L++GG GF+GC+R + + L L E A P + P
Sbjct: 1988 DGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRP 2041
Score = 37.4 bits (85), Expect = 0.093
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 208 ISLKFKAMQSNGILLHREGQHG-NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSL 266
++L+F+A++ G+LL+ G + + L L+ G++ ++G+ P LT
Sbjct: 1396 LALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGS-------GPAVLTSAVP 1448
Query: 267 LDDQHWHSVLIELLDTQVNFTVDKHTHHF-QAKGDSSYLDLNFEISFGGIP----TPGRS 321
++ WH + + + +VD T ++ + L+L+ ++ GG+P
Sbjct: 1449 VEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVALE 1508
Query: 322 RAFRRKSFHGCLENLYYN 339
R F GC+ L N
Sbjct: 1509 RTFVGAGLRGCIRLLDVN 1526
>gi|38327632 discoidin domain receptor family, member 1 isoform b
[Homo sapiens]
Length = 876
Score = 79.0 bits (193), Expect = 3e-14
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLAS---ALPRSSFSSSSELSSSHGPG 57
M A + L +LLL+ + G +P C L +P S S+SS S S
Sbjct: 1 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR 60
Query: 58 FSRLNRRDGAGGWTPLVS---NKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLL 111
SRL DG G W P S + ++LQ+DL V V TQG + ++ SY L
Sbjct: 61 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL 120
Query: 112 MFSDGGRNWKQYRREESIWG---FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRI 168
+S GR W ++ WG GN + + VV L PP AR +RF P A +
Sbjct: 121 RYSRDGRRWMGWKDR---WGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMS-V 176
Query: 169 GMRIEVYGCAYKSEVVYF 186
+R+E+YGC ++ ++ +
Sbjct: 177 CLRVELYGCLWRDGLLSY 194
>gi|83977452 discoidin domain receptor family, member 1 isoform c
[Homo sapiens]
Length = 919
Score = 79.0 bits (193), Expect = 3e-14
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLAS---ALPRSSFSSSSELSSSHGPG 57
M A + L +LLL+ + G +P C L +P S S+SS S S
Sbjct: 1 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR 60
Query: 58 FSRLNRRDGAGGWTPLVS---NKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLL 111
SRL DG G W P S + ++LQ+DL V V TQG + ++ SY L
Sbjct: 61 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL 120
Query: 112 MFSDGGRNWKQYRREESIWG---FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRI 168
+S GR W ++ WG GN + + VV L PP AR +RF P A +
Sbjct: 121 RYSRDGRRWMGWKDR---WGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMS-V 176
Query: 169 GMRIEVYGCAYKSEVVYF 186
+R+E+YGC ++ ++ +
Sbjct: 177 CLRVELYGCLWRDGLLSY 194
>gi|83977450 discoidin domain receptor family, member 1 isoform a
[Homo sapiens]
Length = 913
Score = 79.0 bits (193), Expect = 3e-14
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLAS---ALPRSSFSSSSELSSSHGPG 57
M A + L +LLL+ + G +P C L +P S S+SS S S
Sbjct: 1 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR 60
Query: 58 FSRLNRRDGAGGWTPLVS---NKYQWLQIDLGERMEVTAVATQGGYGSS---DWVTSYLL 111
SRL DG G W P S + ++LQ+DL V V TQG + ++ SY L
Sbjct: 61 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL 120
Query: 112 MFSDGGRNWKQYRREESIWG---FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRI 168
+S GR W ++ WG GN + + VV L PP AR +RF P A +
Sbjct: 121 RYSRDGRRWMGWKDR---WGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMS-V 176
Query: 169 GMRIEVYGCAYKSEVVYF 186
+R+E+YGC ++ ++ +
Sbjct: 177 CLRVELYGCLWRDGLLSY 194
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 77.8 bits (190), Expect = 6e-14
Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 46 SSSELSSSHGPGFSRLNRRDGA-------GGWTPLVSNKYQWLQIDLGERMEVTAVATQG 98
+SS L G RLN + GA G W + QW+++D T V TQG
Sbjct: 402 ASSMLRHGLGAQRGRLNMQTGATEDDYYDGAWCAEDDARTQWIEVDTRRTTRFTGVITQG 461
Query: 99 GYGS--SDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLR 156
S D+VT++ + FS+ + W Y F GN + D+ V L P ARF+R
Sbjct: 462 RDSSIHDDFVTTFFVGFSNDSQTWVMYTNGYEEMTFHGNVDKDTPVLSELPEPVVARFIR 521
Query: 157 FLPLAWNPRGRIGMRIEVYGCAYKSEVVYF 186
PL WN G + MR+EV GC+ Y+
Sbjct: 522 IYPLTWN--GSLCMRLEVLGCSVAPVYSYY 549
>gi|33469931 EGF-like, fibronectin type III and laminin G domains
isoform 2 [Homo sapiens]
Length = 775
Score = 77.8 bits (190), Expect = 6e-14
Identities = 105/417 (25%), Positives = 163/417 (39%), Gaps = 55/417 (13%)
Query: 773 HSEAAYTLGPLLCRGDQSFWNSASFNTETS-YLHFPAFHGELTADVCFFFKTTVSSGVFM 831
H E A+TL R + + + E YL F F E+T F+ GV +
Sbjct: 366 HCEDAFTLTIPQFRESLRSYAATPWPLEPQHYLSFMEF--EIT------FRPDSGDGVLL 417
Query: 832 ENL--GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGAS 889
+ G DF+ I L A V F FD G+G ++S P WH +R R K
Sbjct: 418 YSYDTGSKDFLSINL-AGGHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNGI 474
Query: 890 LQVDQLPQKMQPAPADG-HVRLQLNSQLFIGGTATRQ---------RGFLGCIRSLQLNG 939
LQVD+ QK+ A+G +++ N+ +FIGG + F G I+ + LN
Sbjct: 475 LQVDK--QKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILND 532
Query: 940 VALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNE 999
+ ++ T GV A H C +GG CR ++ G CDC ++G C
Sbjct: 533 RTIHVKH--DFTSGVNVENAAHPCVRAP-CAHGGSCRPRKEGYDCDCPL-GFEGLHCQKA 588
Query: 1000 ISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVS 1059
I + Y +N L + V+ +R + + F+TT LLL+
Sbjct: 589 I----IEAIEIPQFIGRSYLTYDNPDIL-----KRVSGSRSNVFMRFKTTAKDGLLLWRG 639
Query: 1060 SF----YEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVV 1115
+++S+ L +G+L Y L F DG+ H+VK R+
Sbjct: 640 DSPMRPNSDFISLGL-RDGALVFSYNLGSGVASIMVNGSFN---DGRWHRVKAVRDGQSG 695
Query: 1116 MVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADP---DTRRAATSGFTGCLS 1169
+ V+ + +G ++ L + L G T R G GC+S
Sbjct: 696 KITVDDYGAR-----TGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCIS 747
Score = 47.8 bits (112), Expect = 7e-05
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 71/434 (16%)
Query: 208 ISLKFKAMQSNGILLH-REGQHG--NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLG 264
I+L+F+A +G+LL+ E +HG + ++L +I+ L F N G + ++ + LG
Sbjct: 177 ITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRRSLQFRFNCGTG-VAIIVSETKIKLG 235
Query: 265 SLLDDQHWHSVLIELLDTQVNFTVDKHTHHF-QAKGDSSYLDLNFEISFGGIPTPG---R 320
WH+V++ ++ T Q++G S + + GG P+ R
Sbjct: 236 G------WHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVR 289
Query: 321 SRAFRRKSFHGCLENLYYNG----------------VDVTELAKK--------HKPQILM 356
+ R F GC+++L NG DV E + H
Sbjct: 290 ATGTNR-GFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSGICDEASCIHGGTCTA 348
Query: 357 MGNVSFSCPQPQ-------------TVPVTFLSSRSYLALPGNSGEDKVSVTFQ-----F 398
+ S+ C P T+P S RSY A P E + ++F F
Sbjct: 349 IKADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYAATPWPL-EPQHYLSFMEFEITF 407
Query: 399 RTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSF 458
R + G LL+ GS F+ G F G + + L G WH +
Sbjct: 408 RPDSGDGVLLYS-YDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELRV 466
Query: 459 SAKWSHMNVVVDDDTAVQPLVA---VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLR 515
S + + VD V+ + I + GG + L F G ++
Sbjct: 467 SRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQ 526
Query: 516 LITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLG 575
I + D+ + V+ ++ C+ + C HGG C + + CDC
Sbjct: 527 KIILNDRTIH---VKHDFTSG-----VNVENAAHPCVRAPCAHGGSCRPRKEGYDCDC-P 577
Query: 576 TGYTGETCHSSLYE 589
G+ G C ++ E
Sbjct: 578 LGFEGLHCQKAIIE 591
Score = 43.1 bits (100), Expect = 0.002
Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 20/241 (8%)
Query: 357 MGNVSFSCPQPQTVPVTFLSSRSYLAL-PGNSGEDKVSVTFQFRTWNRAGHLLF-GELRR 414
+G SC + + SY+ P + +T +FR G LL+ GE
Sbjct: 139 LGKGGESCSEDIVIQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEH 198
Query: 415 GSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA 474
G G F+ + F G + + + G WH+V + + +++ T
Sbjct: 199 GRGDFMSLAIIRRSLQFRFNCGTGVAIIVSETKIKLGGWHTVMLYRDGLNGLLQLNNGTP 258
Query: 475 VQPLVA---VLIDSGDTYYFGGC-----LDNSSGSGCKSPLGGFQGCLRLITIGDKAVDP 526
V I Y GG L ++G+ GFQGC++ + + + +D
Sbjct: 259 VTGQSQGQYSKITFRTPLYLGGAPSAYWLVRATGTN-----RGFQGCVQSLAVNGRRIDM 313
Query: 527 ILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQ-SWDTFSCDCLGTGYTGETCHS 585
G S D+ S GI D + C HGG C+ D++ C C G+ G C
Sbjct: 314 RPWPLGKALSGADVGECSSGICDE---ASCIHGGTCTAIKADSYICLC-PLGFKGRHCED 369
Query: 586 S 586
+
Sbjct: 370 A 370
Score = 40.8 bits (94), Expect = 0.008
Identities = 77/358 (21%), Positives = 129/358 (36%), Gaps = 59/358 (16%)
Query: 210 LKFKAMQSNGILLHR-EGQHGNHITLELIKGKLVFFLN--SGNAKLPSTIAPVTLTLGSL 266
+ F+ +G+LL+ + + +++ L G + F + SG L S LTLG+
Sbjct: 405 ITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDP---LTLGN- 460
Query: 267 LDDQHWHSVLIELLDTQVNFTVDKHTH-HFQAKGDSSYLDLNFEISFGGIPTPG--RSRA 323
WH + + VDK A+G + + N +I GG+P + +
Sbjct: 461 -----WHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNS 515
Query: 324 FRRKSFHGCLENLYYN------------GVDVTELAKKHKPQILMMGNV------SFSCP 365
K F G ++ + N GV+V A G + C
Sbjct: 516 GVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVRAPCAHGGSCRPRKEGYDCD 575
Query: 366 QP-------------QTVPVTFLSSRSYLALPGNSGEDKVS-----VTFQFRTWNRAGHL 407
P + + + RSYL +VS V +F+T + G L
Sbjct: 576 CPLGFEGLHCQKAIIEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLL 635
Query: 408 LF---GELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSH 464
L+ +R S L L+DG L S + G ++ NDG+WH V
Sbjct: 636 LWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRWHRVKAVRDGQS 694
Query: 465 MNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITI 519
+ VDD T P + ++ Y GG + + + + + G GC+ T+
Sbjct: 695 GKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGLVGCISHFTL 751
Score = 36.2 bits (82), Expect = 0.21
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 852 FSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADG----- 906
F F+ G G + S T WH V R+ LQ++ P G
Sbjct: 215 FRFNCGTGVAIIV--SETKIKLGGWHTVMLYRDGLNGLLQLNN------GTPVTGQSQGQ 266
Query: 907 HVRLQLNSQLFIGGTATR---------QRGFLGCIRSLQLNGVALDLEE----RATVTPG 953
+ ++ + L++GG + RGF GC++SL +NG +D+ +A
Sbjct: 267 YSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGAD 326
Query: 954 VEPGCAGHCSTYGHLCRNGGRCRE-KRRGVTCDCAFSAYDGPFCSN 998
V +G C C +GG C K C C + G C +
Sbjct: 327 VGECSSGICDEAS--CIHGGTCTAIKADSYICLCPL-GFKGRHCED 369
>gi|33469929 EGF-like, fibronectin type III and laminin G domains
isoform 1 [Homo sapiens]
Length = 1009
Score = 77.8 bits (190), Expect = 6e-14
Identities = 105/417 (25%), Positives = 163/417 (39%), Gaps = 55/417 (13%)
Query: 773 HSEAAYTLGPLLCRGDQSFWNSASFNTETS-YLHFPAFHGELTADVCFFFKTTVSSGVFM 831
H E A+TL R + + + E YL F F E+T F+ GV +
Sbjct: 600 HCEDAFTLTIPQFRESLRSYAATPWPLEPQHYLSFMEF--EIT------FRPDSGDGVLL 651
Query: 832 ENL--GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGAS 889
+ G DF+ I L A V F FD G+G ++S P WH +R R K
Sbjct: 652 YSYDTGSKDFLSINL-AGGHVEFRFDCGSGTG--VLRSEDPLTLGNWHELRVSRTAKNGI 708
Query: 890 LQVDQLPQKMQPAPADG-HVRLQLNSQLFIGGTATRQ---------RGFLGCIRSLQLNG 939
LQVD+ QK+ A+G +++ N+ +FIGG + F G I+ + LN
Sbjct: 709 LQVDK--QKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKIILND 766
Query: 940 VALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNE 999
+ ++ T GV A H C +GG CR ++ G CDC ++G C
Sbjct: 767 RTIHVKH--DFTSGVNVENAAHPCVRAP-CAHGGSCRPRKEGYDCDCPL-GFEGLHCQKA 822
Query: 1000 ISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVS 1059
I + Y +N L + V+ +R + + F+TT LLL+
Sbjct: 823 I----IEAIEIPQFIGRSYLTYDNPDIL-----KRVSGSRSNVFMRFKTTAKDGLLLWRG 873
Query: 1060 SF----YEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVV 1115
+++S+ L +G+L Y L F DG+ H+VK R+
Sbjct: 874 DSPMRPNSDFISLGL-RDGALVFSYNLGSGVASIMVNGSFN---DGRWHRVKAVRDGQSG 929
Query: 1116 MVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADP---DTRRAATSGFTGCLS 1169
+ V+ + +G ++ L + L G T R G GC+S
Sbjct: 930 KITVDDYGAR-----TGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCIS 981
Score = 47.8 bits (112), Expect = 7e-05
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 71/434 (16%)
Query: 208 ISLKFKAMQSNGILLH-REGQHG--NHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLG 264
I+L+F+A +G+LL+ E +HG + ++L +I+ L F N G + ++ + LG
Sbjct: 411 ITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRRSLQFRFNCGTG-VAIIVSETKIKLG 469
Query: 265 SLLDDQHWHSVLIELLDTQVNFTVDKHTHHF-QAKGDSSYLDLNFEISFGGIPTPG---R 320
WH+V++ ++ T Q++G S + + GG P+ R
Sbjct: 470 G------WHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVR 523
Query: 321 SRAFRRKSFHGCLENLYYNG----------------VDVTELAKK--------HKPQILM 356
+ R F GC+++L NG DV E + H
Sbjct: 524 ATGTNR-GFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSGICDEASCIHGGTCTA 582
Query: 357 MGNVSFSCPQPQ-------------TVPVTFLSSRSYLALPGNSGEDKVSVTFQ-----F 398
+ S+ C P T+P S RSY A P E + ++F F
Sbjct: 583 IKADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYAATPWPL-EPQHYLSFMEFEITF 641
Query: 399 RTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSF 458
R + G LL+ GS F+ G F G + + L G WH +
Sbjct: 642 RPDSGDGVLLYS-YDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHELRV 700
Query: 459 SAKWSHMNVVVDDDTAVQPLVA---VLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLR 515
S + + VD V+ + I + GG + L F G ++
Sbjct: 701 SRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQ 760
Query: 516 LITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLG 575
I + D+ + V+ ++ C+ + C HGG C + + CDC
Sbjct: 761 KIILNDRTIH---VKHDFTSG-----VNVENAAHPCVRAPCAHGGSCRPRKEGYDCDC-P 811
Query: 576 TGYTGETCHSSLYE 589
G+ G C ++ E
Sbjct: 812 LGFEGLHCQKAIIE 825
Score = 43.1 bits (100), Expect = 0.002
Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 20/241 (8%)
Query: 357 MGNVSFSCPQPQTVPVTFLSSRSYLAL-PGNSGEDKVSVTFQFRTWNRAGHLLF-GELRR 414
+G SC + + SY+ P + +T +FR G LL+ GE
Sbjct: 373 LGKGGESCSEDIVIQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEH 432
Query: 415 GSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA 474
G G F+ + F G + + + G WH+V + + +++ T
Sbjct: 433 GRGDFMSLAIIRRSLQFRFNCGTGVAIIVSETKIKLGGWHTVMLYRDGLNGLLQLNNGTP 492
Query: 475 VQPLVA---VLIDSGDTYYFGGC-----LDNSSGSGCKSPLGGFQGCLRLITIGDKAVDP 526
V I Y GG L ++G+ GFQGC++ + + + +D
Sbjct: 493 VTGQSQGQYSKITFRTPLYLGGAPSAYWLVRATGTN-----RGFQGCVQSLAVNGRRIDM 547
Query: 527 ILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQ-SWDTFSCDCLGTGYTGETCHS 585
G S D+ S GI D + C HGG C+ D++ C C G+ G C
Sbjct: 548 RPWPLGKALSGADVGECSSGICDE---ASCIHGGTCTAIKADSYICLC-PLGFKGRHCED 603
Query: 586 S 586
+
Sbjct: 604 A 604
Score = 40.8 bits (94), Expect = 0.008
Identities = 77/358 (21%), Positives = 129/358 (36%), Gaps = 59/358 (16%)
Query: 210 LKFKAMQSNGILLHR-EGQHGNHITLELIKGKLVFFLN--SGNAKLPSTIAPVTLTLGSL 266
+ F+ +G+LL+ + + +++ L G + F + SG L S LTLG+
Sbjct: 639 ITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDP---LTLGN- 694
Query: 267 LDDQHWHSVLIELLDTQVNFTVDKHTH-HFQAKGDSSYLDLNFEISFGGIPTPG--RSRA 323
WH + + VDK A+G + + N +I GG+P + +
Sbjct: 695 -----WHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNS 749
Query: 324 FRRKSFHGCLENLYYN------------GVDVTELAKKHKPQILMMGNV------SFSCP 365
K F G ++ + N GV+V A G + C
Sbjct: 750 GVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVRAPCAHGGSCRPRKEGYDCD 809
Query: 366 QP-------------QTVPVTFLSSRSYLALPGNSGEDKVS-----VTFQFRTWNRAGHL 407
P + + + RSYL +VS V +F+T + G L
Sbjct: 810 CPLGFEGLHCQKAIIEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLL 869
Query: 408 LF---GELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSH 464
L+ +R S L L+DG L S + G ++ NDG+WH V
Sbjct: 870 LWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRWHRVKAVRDGQS 928
Query: 465 MNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITI 519
+ VDD T P + ++ Y GG + + + + + G GC+ T+
Sbjct: 929 GKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGLVGCISHFTL 985
Score = 36.2 bits (82), Expect = 0.21
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 852 FSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADG----- 906
F F+ G G + S T WH V R+ LQ++ P G
Sbjct: 449 FRFNCGTGVAIIV--SETKIKLGGWHTVMLYRDGLNGLLQLNN------GTPVTGQSQGQ 500
Query: 907 HVRLQLNSQLFIGGTATR---------QRGFLGCIRSLQLNGVALDLEE----RATVTPG 953
+ ++ + L++GG + RGF GC++SL +NG +D+ +A
Sbjct: 501 YSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGAD 560
Query: 954 VEPGCAGHCSTYGHLCRNGGRCRE-KRRGVTCDCAFSAYDGPFCSN 998
V +G C C +GG C K C C + G C +
Sbjct: 561 VGECSSGICDEAS--CIHGGTCTAIKADSYICLCPL-GFKGRHCED 603
>gi|10518506 coagulation factor VIII isoform b precursor [Homo
sapiens]
Length = 216
Score = 77.4 bits (189), Expect = 8e-14
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 31 CDAPL---ASALPRSSFSSSS---ELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQID 84
C PL + A+ + ++SS + ++ P +RL+ + + W P V+N +WLQ+D
Sbjct: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
Query: 85 LGERMEVTAVATQG--GYGSSDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVV 142
+ M+VT V TQG +S +V +L+ S G W + + + F GN ++ + V
Sbjct: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
Query: 143 HYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGC 177
L PP R+LR P +W +I +R+EV GC
Sbjct: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
Score = 32.0 bits (71), Expect = 3.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 132 FPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYKS 181
F GN ++ + H PP AR++R P ++ R +R+E+ GC S
Sbjct: 10 FFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRST--LRMELMGCDLNS 57
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,970,620
Number of Sequences: 37866
Number of extensions: 2598394
Number of successful extensions: 8768
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 7423
Number of HSP's gapped (non-prelim): 1050
length of query: 1288
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1174
effective length of database: 13,930,794
effective search space: 16354752156
effective search space used: 16354752156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.