LOC100131154 23439

Name: LOC100131154	Sequence: fasta or formatted (296aa)		NCBI GI: 239757979
Description: PREDICTED: similar to chondroitin sulfate proteoglycan 4		Not currently referenced in the text
Other entries for this name: alt mRNA {296aa} PREDICTED: similar to chondroitin sulfate proteoglycan 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 22 2 C cysteine 1.4 4 1 D aspartate 4.1 12 2 E glutamate 5.7 17 2 F phenylalanine 3.4 10 1 G glycine 8.4 25 1 H histidine 5.1 15 2 I isoleucine 3.0 9 1 K lysine 1.0 3 1 L leucine 17.9 53 4 M methionine 1.7 5 1 N asparagine 2.7 8 1 P proline 5.7 17 1 Q glutamine 5.4 16 1 R arginine 2.4 7 1 S serine 7.4 22 2 T threonine 7.1 21 2 V valine 6.8 20 2 W tryptophan 1.7 5 1 Y tyrosine 1.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to chondroitin sulfate proteogly... LOC100131154 1.000 PREDICTED: similar to chondroitin sulfate proteogly... LOC100287819 1.000 PREDICTED: hypothetical protein XP_002344245 LOC100287758 1.000 PREDICTED: hypothetical protein XP_002344244 CSPG4 0.777 chondroitin sulfate proteoglycan 4 NRXN2 0.045 neurexin 2 isoform alpha-2 precursor NRXN2 0.035 neurexin 2 isoform alpha-1 precursor NRXN1 0.033 neurexin 1 isoform alpha1 precursor NRXN1 0.023 neurexin 1 isoform alpha2 precursor LAMA2 0.021 laminin alpha 2 subunit isoform b precursor LAMA2 0.021 laminin alpha 2 subunit isoform a precursor RMND5B 0.016 required for meiotic nuclear division 5 homolog B [H... SLIT1 0.014 slit homolog 1 NRXN3 0.014 neurexin 3 isoform 1 precursor SLIT3 0.014 slit homolog 3 LAMA1 0.010 laminin, alpha 1 precursor CNTNAP1 0.010 contactin associated protein 1 precursor LRRN4 0.009 leucine rich repeat neuronal 4 AGRN 0.009 agrin CNTNAP4 0.009 cell recognition protein CASPR4 isoform 1 PTX3 0.007 pentraxin 3 CNTNAP4 0.007 cell recognition protein CASPR4 isoform 2 WDR87 0.007 NYD-SP11 protein HSPG2 0.007 heparan sulfate proteoglycan 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.