Guide to the Human Genome
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Name: PRKACB Sequence: fasta or formatted (257aa) NCBI GI: 46909587
Description:

cAMP-dependent protein kinase catalytic subunit beta isoform 3

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [398aa] cAMP-dependent protein kinase catalytic subunit beta isoform 1
alt prot [351aa] cAMP-dependent protein kinase catalytic subunit beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         20           2
 C cysteine            0.4          1           1
 D aspartate           3.9         10           1
 E glutamate           7.8         20           1
 F phenylalanine       6.2         16           2
 G glycine             6.6         17           2
 H histidine           2.3          6           1
 I isoleucine          5.4         14           2
 K lysine              9.7         25           2
 L leucine             9.7         25           2
 M methionine          2.7          7           1
 N asparagine          4.3         11           2
 P proline             3.9         10           2
 Q glutamine           3.9         10           1
 R arginine            4.3         11           2
 S serine              3.5          9           1
 T threonine           4.3         11           1
 V valine              6.2         16           2
 W tryptophan          1.6          4           2
 Y tyrosine            5.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP-dependent protein kinase catalytic subunit beta... 
PRKACB                0.990   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACB                0.936   cAMP-dependent protein kinase catalytic subunit beta...
PRKACA                0.920   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACA                0.874   cAMP-dependent protein kinase catalytic subunit alph...
PRKACG                0.788   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
PRKX                  0.507   protein kinase, X-linked 
SGK2                  0.399   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.399   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK1                  0.397   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.397   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.397   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.397   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PRKG1                 0.395   protein kinase, cGMP-dependent, type I isoform 1 [H...
PRKG1                 0.395   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
AKT2                  0.391   AKT2 kinase 
PRKG2                 0.387   protein kinase, cGMP-dependent, type II 
AKT1                  0.383   AKT1 kinase 
AKT1                  0.383   AKT1 kinase 
AKT1                  0.383   AKT1 kinase 
AKT3                  0.377   AKT3 kinase isoform 1 
AKT3                  0.377   AKT3 kinase isoform 2 
SGK3                  0.371   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.371   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCA                 0.355   protein kinase C, alpha 
PRKCB                 0.355   protein kinase C, beta isoform 1 
PRKCB                 0.355   protein kinase C, beta isoform 2 
PRKCH                 0.351   protein kinase C, eta 
RPS6KB2               0.349   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
PKN3                  0.349   protein kinase PKNbeta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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