BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|46409458 hypothetical protein LOC389658 [Homo sapiens] (129 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|46409458 hypothetical protein LOC389658 [Homo sapiens] 270 2e-73 gi|148228293 hypothetical protein LOC285016 [Homo sapiens] 122 8e-29 gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 31 0.24 gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 31 0.24 gi|4758062 cytokine receptor-like factor 1 [Homo sapiens] 31 0.31 gi|239582755 myosin IG [Homo sapiens] 30 0.69 gi|89257335 oleoyl-ACP hydrolase isoform 2 [Homo sapiens] 30 0.69 gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens] 30 0.69 gi|9966803 poly(rC) binding protein 4 isoform a [Homo sapiens] 29 1.2 gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens] 29 1.2 gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens] 29 1.2 gi|71979663 growth factor receptor-bound protein 14 [Homo sapiens] 28 1.5 gi|118600969 C-type lectin domain family 17, member A [Homo sapi... 28 2.0 gi|169204821 PREDICTED: hypothetical protein [Homo sapiens] 28 2.0 gi|169205432 PREDICTED: hypothetical protein [Homo sapiens] 28 2.0 gi|169204105 PREDICTED: hypothetical protein [Homo sapiens] 28 2.0 gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 28 2.6 gi|166362732 ELK1 protein [Homo sapiens] 28 2.6 gi|166362730 ELK1 protein [Homo sapiens] 28 2.6 gi|239757718 PREDICTED: hypothetical protein XP_002345530 [Homo ... 28 2.6 gi|239752205 PREDICTED: hypothetical protein XP_002348148 [Homo ... 28 2.6 gi|239746728 PREDICTED: hypothetical protein XP_002343821 [Homo ... 28 2.6 gi|5032223 plexin C1 [Homo sapiens] 28 2.6 gi|57222570 codanin 1 [Homo sapiens] 28 2.6 gi|221625422 ephrin receptor EphA5 isoform b precursor [Homo sap... 27 3.4 gi|221625401 ephrin receptor EphA5 isoform a precursor [Homo sap... 27 3.4 gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 27 3.4 gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 27 3.4 gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] 27 4.5 gi|4826988 ribosomal protein L3-like [Homo sapiens] 27 4.5 >gi|46409458 hypothetical protein LOC389658 [Homo sapiens] Length = 129 Score = 270 bits (691), Expect = 2e-73 Identities = 129/129 (100%), Positives = 129/129 (100%) Query: 1 MRPLKPGAPLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTPSGS 60 MRPLKPGAPLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTPSGS Sbjct: 1 MRPLKPGAPLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTPSGS 60 Query: 61 RSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRLYYNTRECSTPAYYKRCARLLTRL 120 RSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRLYYNTRECSTPAYYKRCARLLTRL Sbjct: 61 RSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRLYYNTRECSTPAYYKRCARLLTRL 120 Query: 121 AVSPLCSQT 129 AVSPLCSQT Sbjct: 121 AVSPLCSQT 129 >gi|148228293 hypothetical protein LOC285016 [Homo sapiens] Length = 152 Score = 122 bits (306), Expect = 8e-29 Identities = 54/79 (68%), Positives = 64/79 (81%) Query: 50 AAGAGRTPSGSRSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRLYYNTRECSTPAY 109 A AG PS + EI PRD +KDKF+KH TGP+ FSP+CSKHFHRLY+NTR+C+ PAY Sbjct: 71 AEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRLYHNTRDCTIPAY 130 Query: 110 YKRCARLLTRLAVSPLCSQ 128 YKRCARLLTRLAVSP+C + Sbjct: 131 YKRCARLLTRLAVSPVCME 149 >gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sapiens] Length = 1038 Score = 31.2 bits (69), Expect = 0.24 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Query: 40 KEPKPL---LFLPAAGAGRTPSGSRSAEIF 66 + P PL LFLP G G+ PS +++AEIF Sbjct: 678 RPPPPLEDNLFLPPQGGGKPPSSAQTAEIF 707 >gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sapiens] Length = 1086 Score = 31.2 bits (69), Expect = 0.24 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Query: 40 KEPKPL---LFLPAAGAGRTPSGSRSAEIF 66 + P PL LFLP G G+ PS +++AEIF Sbjct: 756 RPPPPLEDNLFLPPQGGGKPPSSAQTAEIF 785 >gi|4758062 cytokine receptor-like factor 1 [Homo sapiens] Length = 422 Score = 30.8 bits (68), Expect = 0.31 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 29 PRGRRG-ARVTDKEPKPLL----FLPAAGAGRTPSGSRSAEIFPRDSNL 72 P GRRG A + + P PLL L GA R SG+ +A I P+D L Sbjct: 2 PAGRRGPAAQSARRPPPLLPLLLLLCVLGAPRAGSGAHTAVISPQDPTL 50 >gi|239582755 myosin IG [Homo sapiens] Length = 1018 Score = 29.6 bits (65), Expect = 0.69 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 12/80 (15%) Query: 62 SAEIFPRDSNL---KDKFIKHFTGPVTFSPE---------CSKHFHRLYYNTRECSTPAY 109 S ++ P D + +D IKH+ G VT+S E + F RL YN+ + + A Sbjct: 499 SRQLCPTDKTMEFGRDFRIKHYAGDVTYSVEGFIDKNRDFLFQDFKRLLYNSTDPTLRAM 558 Query: 110 YKRCARLLTRLAVSPLCSQT 129 + + +T + PL + T Sbjct: 559 WPDGQQDITEVTKRPLTAGT 578 >gi|89257335 oleoyl-ACP hydrolase isoform 2 [Homo sapiens] Length = 265 Score = 29.6 bits (65), Expect = 0.69 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 39 DKEPKPL-LFLPAAGAGRTPSGSRSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRL 97 + +P+PL LFL +A TP S++ P+D L ++ I H+ +P KHF Sbjct: 117 NNQPEPLHLFLSSA----TPVHSKAWHRIPKDDELSEEQISHYLMEFGGTP---KHFAEA 169 Query: 98 YYNTRECS 105 ++CS Sbjct: 170 KEFVKQCS 177 >gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens] Length = 318 Score = 29.6 bits (65), Expect = 0.69 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 39 DKEPKPL-LFLPAAGAGRTPSGSRSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRL 97 + +P+PL LFL +A TP S++ P+D L ++ I H+ +P KHF Sbjct: 170 NNQPEPLHLFLSSA----TPVHSKAWHRIPKDDELSEEQISHYLMEFGGTP---KHFAEA 222 Query: 98 YYNTRECS 105 ++CS Sbjct: 223 KEFVKQCS 230 >gi|9966803 poly(rC) binding protein 4 isoform a [Homo sapiens] Length = 424 Score = 28.9 bits (63), Expect = 1.2 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 PLKPGAPLPALF---LLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTP 57 P A LPA F L AL +P G G P + +P P L LP A G P Sbjct: 341 PSSAPADLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPP 398 >gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens] Length = 403 Score = 28.9 bits (63), Expect = 1.2 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 PLKPGAPLPALF---LLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTP 57 P A LPA F L AL +P G G P + +P P L LP A G P Sbjct: 320 PSSAPADLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPP 377 >gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens] Length = 403 Score = 28.9 bits (63), Expect = 1.2 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 3 PLKPGAPLPALF---LLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTP 57 P A LPA F L AL +P G G P + +P P L LP A G P Sbjct: 320 PSSAPADLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPP 377 >gi|71979663 growth factor receptor-bound protein 14 [Homo sapiens] Length = 540 Score = 28.5 bits (62), Expect = 1.5 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query: 8 APLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKPLLFLPAAGAGRTPSGS-RSAEIF 66 AP P L AL P G G RR + D P + P +P S SA++F Sbjct: 40 APAPWLHARALLPLPDGTRGCAADRRKKKDLDVPEMPSIPNPFPELCCSPFTSVLSADLF 99 Query: 67 PRDSNLKDKFIKHFT 81 P+ ++ K + IK ++ Sbjct: 100 PKANSRKKQVIKVYS 114 >gi|118600969 C-type lectin domain family 17, member A [Homo sapiens] Length = 289 Score = 28.1 bits (61), Expect = 2.0 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Query: 3 PLKPGAPLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKP 44 P K P PAL L+ S G+ PR R A+ T+K P P Sbjct: 58 PYKDLPPKPAL---TLSFSSPGSSAPPRPPRAAKETEKPPLP 96 >gi|169204821 PREDICTED: hypothetical protein [Homo sapiens] Length = 160 Score = 28.1 bits (61), Expect = 2.0 Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRGA-RVTDKEPKPLLFLPA-----AGAGR 55 RP GAP PA L P GA P GRR R P PL P+ A Sbjct: 57 RPGLLGAPAPAPALTQHPSLPQGAGALPAGRRRPDRPRPAPPWPLSPRPSHLPSRVSAAP 116 Query: 56 TPSGSR 61 P+GSR Sbjct: 117 PPAGSR 122 >gi|169205432 PREDICTED: hypothetical protein [Homo sapiens] Length = 160 Score = 28.1 bits (61), Expect = 2.0 Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRGA-RVTDKEPKPLLFLPA-----AGAGR 55 RP GAP PA L P GA P GRR R P PL P+ A Sbjct: 57 RPGLLGAPAPAPALTQHPSLPQGAGALPAGRRRPDRPRPAPPWPLSPRPSHLPSRVSAAP 116 Query: 56 TPSGSR 61 P+GSR Sbjct: 117 PPAGSR 122 >gi|169204105 PREDICTED: hypothetical protein [Homo sapiens] Length = 160 Score = 28.1 bits (61), Expect = 2.0 Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRGA-RVTDKEPKPLLFLPA-----AGAGR 55 RP GAP PA L P GA P GRR R P PL P+ A Sbjct: 57 RPGLLGAPAPAPALTQHPSLPQGAGALPAGRRRPDRPRPAPPWPLSPRPSHLPSRVSAAP 116 Query: 56 TPSGSR 61 P+GSR Sbjct: 117 PPAGSR 122 >gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] Length = 1192 Score = 27.7 bits (60), Expect = 2.6 Identities = 25/97 (25%), Positives = 34/97 (35%), Gaps = 25/97 (25%) Query: 6 PGAPLPALFLLALALSPHG----------AHGRPRGRRGARVTDKEPKPLLFL------- 48 P P PA + A + P G A G RGR G R + ++ K L F+ Sbjct: 296 PPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRGREGGRASTRDRKMLKFISGIFTKS 355 Query: 49 --------PAAGAGRTPSGSRSAEIFPRDSNLKDKFI 77 P G SGS S E+ + K + Sbjct: 356 TGGPPGSGPLPGPPSLSSGSGSRELLGAELRASPKAV 392 >gi|166362732 ELK1 protein [Homo sapiens] Length = 428 Score = 27.7 bits (60), Expect = 2.6 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Query: 42 PKPLLFLPAA---GAGRTPSGSRSAEIFPRDSNLK 73 P+P + LP+A GA PSGSRS P ++ L+ Sbjct: 175 PRPAVVLPSAAPAGAAAPPSGSRSTSPSPLEACLE 209 >gi|166362730 ELK1 protein [Homo sapiens] Length = 428 Score = 27.7 bits (60), Expect = 2.6 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Query: 42 PKPLLFLPAA---GAGRTPSGSRSAEIFPRDSNLK 73 P+P + LP+A GA PSGSRS P ++ L+ Sbjct: 175 PRPAVVLPSAAPAGAAAPPSGSRSTSPSPLEACLE 209 >gi|239757718 PREDICTED: hypothetical protein XP_002345530 [Homo sapiens] Length = 242 Score = 27.7 bits (60), Expect = 2.6 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 9/33 (27%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRG 34 RPL PG P+PA ALALS GRRG Sbjct: 215 RPLAPGPPVPAAGPAALALS---------GRRG 238 >gi|239752205 PREDICTED: hypothetical protein XP_002348148 [Homo sapiens] Length = 242 Score = 27.7 bits (60), Expect = 2.6 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 9/33 (27%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRG 34 RPL PG P+PA ALALS GRRG Sbjct: 215 RPLAPGPPVPAAGPAALALS---------GRRG 238 >gi|239746728 PREDICTED: hypothetical protein XP_002343821 [Homo sapiens] Length = 242 Score = 27.7 bits (60), Expect = 2.6 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 9/33 (27%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRG 34 RPL PG P+PA ALALS GRRG Sbjct: 215 RPLAPGPPVPAAGPAALALS---------GRRG 238 >gi|5032223 plexin C1 [Homo sapiens] Length = 1568 Score = 27.7 bits (60), Expect = 2.6 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Query: 2 RPLKPGAPLPAL-FLLALALSPHGA 25 RP +P APLP L +LLALA GA Sbjct: 11 RPPRPAAPLPLLAYLLALAAPGRGA 35 >gi|57222570 codanin 1 [Homo sapiens] Length = 1227 Score = 27.7 bits (60), Expect = 2.6 Identities = 17/35 (48%), Positives = 17/35 (48%) Query: 2 RPLKPGAPLPALFLLALALSPHGAHGRPRGRRGAR 36 R L G P PA A A P G PRG RGAR Sbjct: 63 RVLPQGPPTPAKTPGASAALPGRPGGPPRGSRGAR 97 >gi|221625422 ephrin receptor EphA5 isoform b precursor [Homo sapiens] Length = 1015 Score = 27.3 bits (59), Expect = 3.4 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 71 NLKDKFIKHFTGPVTFSPECSKHFHRLYYNTREC----STPAYYKRCARLLTRLAVSP 124 +L D+ +K T P K F+ + + C S YYK+C ++ LAV P Sbjct: 187 DLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFP 244 >gi|221625401 ephrin receptor EphA5 isoform a precursor [Homo sapiens] Length = 1037 Score = 27.3 bits (59), Expect = 3.4 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 71 NLKDKFIKHFTGPVTFSPECSKHFHRLYYNTREC----STPAYYKRCARLLTRLAVSP 124 +L D+ +K T P K F+ + + C S YYK+C ++ LAV P Sbjct: 187 DLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFP 244 >gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo sapiens] Length = 1059 Score = 27.3 bits (59), Expect = 3.4 Identities = 34/107 (31%), Positives = 41/107 (38%), Gaps = 14/107 (13%) Query: 3 PLKPGAPLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKPL-----------LFLPAA 51 P +PG LP L L A A S A G T P P + PA Sbjct: 284 PPQPGPHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAGVGVPPPAT 343 Query: 52 GAGRTPSGSRSA-EIFPRDSNLKDKFIKHFTGPVTFS-PECSKHFHR 96 G G P ++F + S+L I H TG FS CSK F+R Sbjct: 344 GGGDGPFACPLCWKVFKKPSHLHQHQIIH-TGEKPFSCSVCSKSFNR 389 >gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo sapiens] Length = 1059 Score = 27.3 bits (59), Expect = 3.4 Identities = 34/107 (31%), Positives = 41/107 (38%), Gaps = 14/107 (13%) Query: 3 PLKPGAPLPALFLLALALSPHGAHGRPRGRRGARVTDKEPKPL-----------LFLPAA 51 P +PG LP L L A A S A G T P P + PA Sbjct: 284 PPQPGPHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAPAGVGVPPPAT 343 Query: 52 GAGRTPSGSRSA-EIFPRDSNLKDKFIKHFTGPVTFS-PECSKHFHR 96 G G P ++F + S+L I H TG FS CSK F+R Sbjct: 344 GGGDGPFACPLCWKVFKKPSHLHQHQIIH-TGEKPFSCSVCSKSFNR 389 >gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] Length = 1992 Score = 26.9 bits (58), Expect = 4.5 Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 13/86 (15%) Query: 35 ARVTDKEPKPLLFLPAAGAGRTPSGSRSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHF 94 AR ++P PL +G + A++ D L FIK G Sbjct: 793 ARAIQRKPNPLANSNTSGYSESKKDDARAQLMKEDPELAKSFIKTLFGV----------- 841 Query: 95 HRLYYNTRECSTPAYYKRCARLLTRL 120 LY + PA +C R + R+ Sbjct: 842 --LYEVYSSSAGPAVRHKCLRAILRI 865 >gi|4826988 ribosomal protein L3-like [Homo sapiens] Length = 407 Score = 26.9 bits (58), Expect = 4.5 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 18/79 (22%) Query: 37 VTDKEPKPLLFLPAAGAGRTPSGSRSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHR 96 VT E PL+ + G TP G RS K F +H S EC + F++ Sbjct: 76 VTIVETPPLVVVGVVGYVATPRGLRS---------FKTIFAEH------LSDECRRRFYK 120 Query: 97 LYYNTRECSTPAYYKRCAR 115 ++ +++ A+ K C R Sbjct: 121 DWHKSKK---KAFTKACKR 136 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.138 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,278,184 Number of Sequences: 37866 Number of extensions: 336114 Number of successful extensions: 937 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 45 Number of HSP's that attempted gapping in prelim test: 922 Number of HSP's gapped (non-prelim): 61 length of query: 129 length of database: 18,247,518 effective HSP length: 90 effective length of query: 39 effective length of database: 14,839,578 effective search space: 578743542 effective search space used: 578743542 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.