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Search of human proteins with 46397308
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46397308 polyamine oxidase isoform 2 [Homo sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46397308 polyamine oxidase isoform 2 [Homo sapiens] 665 0.0
gi|46397310 polyamine oxidase isoform 4 [Homo sapiens] 593 e-170
gi|23097272 polyamine oxidase isoform 1 [Homo sapiens] 593 e-170
gi|28559074 spermine oxidase isoform 1 [Homo sapiens] 152 5e-37
gi|28559080 spermine oxidase isoform 4 [Homo sapiens] 138 8e-33
gi|28559076 spermine oxidase isoform 2 [Homo sapiens] 138 8e-33
gi|28559078 spermine oxidase isoform 3 [Homo sapiens] 73 3e-13
gi|38202207 monoamine oxidase B [Homo sapiens] 42 6e-04
gi|4557735 monoamine oxidase A [Homo sapiens] 41 0.001
gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa... 40 0.002
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 40 0.002
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 40 0.002
gi|170650615 protoporphyrinogen oxidase [Homo sapiens] 40 0.002
gi|4506001 protoporphyrinogen oxidase [Homo sapiens] 40 0.002
gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa... 37 0.031
gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] 37 0.031
gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain... 31 1.7
gi|11225256 uncoupling protein 1 [Homo sapiens] 30 3.8
gi|119703746 electron-transferring-flavoprotein dehydrogenase pr... 30 3.8
gi|118600963 Nik related kinase [Homo sapiens] 30 3.8
gi|14861834 cat eye syndrome chromosome region, candidate 5 isof... 29 6.5
gi|47551347 protease, serine-like 1 [Homo sapiens] 29 6.5
>gi|46397308 polyamine oxidase isoform 2 [Homo sapiens]
Length = 325
Score = 665 bits (1716), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF 60
MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF
Sbjct: 1 MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF 60
Query: 61 GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA 120
GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA
Sbjct: 61 GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA 120
Query: 121 SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK 180
SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK
Sbjct: 121 SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK 180
Query: 181 LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT 240
LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT
Sbjct: 181 LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT 240
Query: 241 VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLGLSTFSVGSLP 300
VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLGLSTFSVGSLP
Sbjct: 241 VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLGLSTFSVGSLP 300
Query: 301 DLSLSSWRLCRMKKYFCVSPKCSGE 325
DLSLSSWRLCRMKKYFCVSPKCSGE
Sbjct: 301 DLSLSSWRLCRMKKYFCVSPKCSGE 325
>gi|46397310 polyamine oxidase isoform 4 [Homo sapiens]
Length = 486
Score = 593 bits (1529), Expect = e-170
Identities = 295/305 (96%), Positives = 295/305 (96%), Gaps = 5/305 (1%)
Query: 1 MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF 60
MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF
Sbjct: 1 MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF 60
Query: 61 GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA 120
GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA
Sbjct: 61 GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA 120
Query: 121 SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK 180
SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK
Sbjct: 121 SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK 180
Query: 181 LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT 240
LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT
Sbjct: 181 LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT 240
Query: 241 VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLG-----LSTFS 295
VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLG L TF
Sbjct: 241 VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLGFLREHLDTFF 300
Query: 296 VGSLP 300
LP
Sbjct: 301 DPPLP 305
>gi|23097272 polyamine oxidase isoform 1 [Homo sapiens]
Length = 511
Score = 593 bits (1529), Expect = e-170
Identities = 295/305 (96%), Positives = 295/305 (96%), Gaps = 5/305 (1%)
Query: 1 MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF 60
MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF
Sbjct: 1 MESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCF 60
Query: 61 GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA 120
GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA
Sbjct: 61 GGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGA 120
Query: 121 SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK 180
SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK
Sbjct: 121 SVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLK 180
Query: 181 LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT 240
LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT
Sbjct: 181 LAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFSKGYQGLTNCMMAALPEDT 240
Query: 241 VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLG-----LSTFS 295
VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLG L TF
Sbjct: 241 VVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLGFLREHLDTFF 300
Query: 296 VGSLP 300
LP
Sbjct: 301 DPPLP 305
>gi|28559074 spermine oxidase isoform 1 [Homo sapiens]
Length = 555
Score = 152 bits (383), Expect = 5e-37
Identities = 107/340 (31%), Positives = 163/340 (47%), Gaps = 58/340 (17%)
Query: 2 ESTGSVGEAP--------GGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR 53
ES+G + P G PRV+V+G G+AGL AA+ L F + VLEA++ GGR
Sbjct: 5 ESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALL-EQGFTDVTVLEASSHIGGR 63
Query: 54 IRSERCFGGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSV 113
++S + E+GA WIHG S GNP++ LA GLL E + + G + L S
Sbjct: 64 VQSVKLGHATFELGATWIHG-SHGNPIYHLAEANGLLEETTDGERSV-----GRISLYSK 117
Query: 114 S-----YASSGASVSLQLVAEMATLFYGLIDQTREFLHAAETPVP-----SVGEYLKKEI 163
+ + G + +V E + L+ + + T+EF + PV SVG + ++E+
Sbjct: 118 NGVACYLTNHGRRIPKDVVEEFSDLYNEVYNLTQEFFRH-DKPVNAESQNSVGVFTREEV 176
Query: 164 GQHVAGWTEDEE-TRKLKLAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFS 222
+ +D E T++LKLA++ + +E C S +HSMD V+L+ FGE+T +PG
Sbjct: 177 RNRIRNDPDDPEATKRLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHIIP 236
Query: 223 KGYQGLTNCMMAALPEDTVVFEKPVKTIHWNGSFQEAAFP-------------------- 262
G+ + + +P + KPV+ IHW+ + P
Sbjct: 237 SGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARPRGPEIEPRGEGDHNHDTGEGGQG 296
Query: 263 -----------GETFPVSVECEDGDRFPAHHVIVTVPLGL 291
E + V VECED + PA HVIVTV LG+
Sbjct: 297 GEEPRGGRWDEDEQWSVVVECEDCELIPADHVIVTVSLGV 336
>gi|28559080 spermine oxidase isoform 4 [Homo sapiens]
Length = 532
Score = 138 bits (347), Expect = 8e-33
Identities = 89/271 (32%), Positives = 141/271 (52%), Gaps = 27/271 (9%)
Query: 2 ESTGSVGEAP--------GGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR 53
ES+G + P G PRV+V+G G+AGL AA+ L F + VLEA++ GGR
Sbjct: 5 ESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALL-EQGFTDVTVLEASSHIGGR 63
Query: 54 IRSERCFGGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSV 113
++S + E+GA WIHG S GNP++ LA GLL E + + G + L S
Sbjct: 64 VQSVKLGHATFELGATWIHG-SHGNPIYHLAEANGLLEETTDGERSV-----GRISLYSK 117
Query: 114 S-----YASSGASVSLQLVAEMATLFYGLIDQTREFLHAAETPVP-----SVGEYLKKEI 163
+ + G + +V E + L+ + + T+EF + PV SVG + ++E+
Sbjct: 118 NGVACYLTNHGRRIPKDVVEEFSDLYNEVYNLTQEFFRH-DKPVNAESQNSVGVFTREEV 176
Query: 164 GQHVAGWTEDEE-TRKLKLAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFS 222
+ +D E T++LKLA++ + +E C S +HSMD V+L+ FGE+T +PG
Sbjct: 177 RNRIRNDPDDPEATKRLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHIIP 236
Query: 223 KGYQGLTNCMMAALPEDTVVFEKPVKTIHWN 253
G+ + + +P + KPV+ IHW+
Sbjct: 237 SGFMRVVELLAEGIPAHVIQLGKPVRCIHWD 267
>gi|28559076 spermine oxidase isoform 2 [Homo sapiens]
Length = 502
Score = 138 bits (347), Expect = 8e-33
Identities = 89/271 (32%), Positives = 141/271 (52%), Gaps = 27/271 (9%)
Query: 2 ESTGSVGEAP--------GGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR 53
ES+G + P G PRV+V+G G+AGL AA+ L F + VLEA++ GGR
Sbjct: 5 ESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALL-EQGFTDVTVLEASSHIGGR 63
Query: 54 IRSERCFGGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSV 113
++S + E+GA WIHG S GNP++ LA GLL E + + G + L S
Sbjct: 64 VQSVKLGHATFELGATWIHG-SHGNPIYHLAEANGLLEETTDGERSV-----GRISLYSK 117
Query: 114 S-----YASSGASVSLQLVAEMATLFYGLIDQTREFLHAAETPVP-----SVGEYLKKEI 163
+ + G + +V E + L+ + + T+EF + PV SVG + ++E+
Sbjct: 118 NGVACYLTNHGRRIPKDVVEEFSDLYNEVYNLTQEFFRH-DKPVNAESQNSVGVFTREEV 176
Query: 164 GQHVAGWTEDEE-TRKLKLAVLNSFFNLECCVSGTHSMDLVALAPFGEYTVLPGLDCTFS 222
+ +D E T++LKLA++ + +E C S +HSMD V+L+ FGE+T +PG
Sbjct: 177 RNRIRNDPDDPEATKRLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHIIP 236
Query: 223 KGYQGLTNCMMAALPEDTVVFEKPVKTIHWN 253
G+ + + +P + KPV+ IHW+
Sbjct: 237 SGFMRVVELLAEGIPAHVIQLGKPVRCIHWD 267
>gi|28559078 spermine oxidase isoform 3 [Homo sapiens]
Length = 190
Score = 73.2 bits (178), Expect = 3e-13
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 2 ESTGSVGEAP--------GGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR 53
ES+G + P G PRV+V+G G+AGL AA+ L F + VLEA++ GGR
Sbjct: 5 ESSGDSADDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALL-EQGFTDVTVLEASSHIGGR 63
Query: 54 IRSERCFGGVVEVGAHWIHGPSRGNPVFQLAAEYGLLGE 92
++S + E+GA WIHG S GNP++ LA GLL E
Sbjct: 64 VQSVKLGHATFELGATWIHG-SHGNPIYHLAEANGLLEE 101
>gi|38202207 monoamine oxidase B [Homo sapiens]
Length = 520
Score = 42.4 bits (98), Expect = 6e-04
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Query: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR---IRSERCFGGVVEVGAHWIH 72
V+VVGGGI+G+ AA+ L H + ++ VLEA R GGR +R+++ V++G ++
Sbjct: 7 VVVVGGGISGMAAAKLL--HDSGLNVVVLEARDRVGGRTYTLRNQKV--KYVDLGGSYV- 61
Query: 73 GPSRGNPVFQLAAEYGL 89
GP++ N + +LA E GL
Sbjct: 62 GPTQ-NRILRLAKELGL 77
>gi|4557735 monoamine oxidase A [Homo sapiens]
Length = 527
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Query: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGR---IRSERCFGGVVEVGAHWIH 72
V+V+GGGI+GL AA+ L + + VLEA R GGR IR+E V+VG ++
Sbjct: 16 VVVIGGGISGLSAAKLLTEYGV--SVLVLEARDRVGGRTYTIRNEHV--DYVDVGGAYV- 70
Query: 73 GPSRGNPVFQLAAEYGL 89
GP++ N + +L+ E G+
Sbjct: 71 GPTQ-NRILRLSKELGI 86
>gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
sapiens]
Length = 590
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 16 VLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGV-VEVGAHWIHGP 74
V+++G G AGL AA++L H+ + VLEA R GGR+ ++ F GV V GA ++G
Sbjct: 253 VIIIGAGPAGLAAARQL--HNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNG- 309
Query: 75 SRGNPV 80
NPV
Sbjct: 310 CINNPV 315
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 15 RVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGVVEVGAHWIHGP 74
+V+++G G++GL AA++L S + +LEA R GGR+ + R V ++GA + G
Sbjct: 300 KVIIIGSGVSGLAAARQL--QSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL 357
Query: 75 SRGNPVFQLAAEYGLLGEKELSQENQLVETGG 106
GNP+ ++ + + K + Q+ L E G
Sbjct: 358 G-GNPMAVVSKQVNMELAK-IKQKCPLYEANG 387
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 15 RVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGVVEVGAHWIHGP 74
+V+++G G++GL AA++L S + +LEA R GGR+ + R V ++GA + G
Sbjct: 280 KVIIIGSGVSGLAAARQL--QSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL 337
Query: 75 SRGNPVFQLAAEYGLLGEKELSQENQLVETGG 106
GNP+ ++ + + K + Q+ L E G
Sbjct: 338 G-GNPMAVVSKQVNMELAK-IKQKCPLYEANG 367
>gi|170650615 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 13 GPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSER-CFGGVVEVGAHWI 71
G V+V+GGGI+GL A+ L P + ++E++ R GG IRS R G + E+G I
Sbjct: 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGI 61
Query: 72 H-GPSRGNPVFQLAAEYGLLGE 92
+ G L +E GL E
Sbjct: 62 RPAGALGARTLLLVSELGLDSE 83
>gi|4506001 protoporphyrinogen oxidase [Homo sapiens]
Length = 477
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 13 GPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSER-CFGGVVEVGAHWI 71
G V+V+GGGI+GL A+ L P + ++E++ R GG IRS R G + E+G I
Sbjct: 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGI 61
Query: 72 H-GPSRGNPVFQLAAEYGLLGE 92
+ G L +E GL E
Sbjct: 62 RPAGALGARTLLLVSELGLDSE 83
>gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo
sapiens]
Length = 567
Score = 36.6 bits (83), Expect = 0.031
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 15 RVLVVGGGIAGLGAAQRL--CGHSAFPHLRVLEATARAGGRIRS--ERCFGGVVEVGAHW 70
RV+VVG G+AGL AA+ L GH + +LEA R GGRI + ++ G + E+GA
Sbjct: 61 RVIVVGAGVAGLVAAKVLSDAGHK----VTILEADNRIGGRIFTYRDQNTGWIGELGA-- 114
Query: 71 IHGPSRGNPVFQLAAEYGL 89
+ PS + +L GL
Sbjct: 115 MRMPSSHRILHKLCQGLGL 133
>gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]
Length = 589
Score = 36.6 bits (83), Expect = 0.031
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 15 RVLVVGGGIAGLGAAQRL--CGHSAFPHLRVLEATARAGGRIRS--ERCFGGVVEVGAHW 70
RV+VVG G+AGL AA+ L GH + +LEA R GGRI + ++ G + E+GA
Sbjct: 83 RVIVVGAGVAGLVAAKVLSDAGHK----VTILEADNRIGGRIFTYRDQNTGWIGELGA-- 136
Query: 71 IHGPSRGNPVFQLAAEYGL 89
+ PS + +L GL
Sbjct: 137 MRMPSSHRILHKLCQGLGL 155
>gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain
1 [Homo sapiens]
Length = 500
Score = 30.8 bits (68), Expect = 1.7
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 11 PGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATA 48
P + +VVGGGIAG+ A++L H FP +L TA
Sbjct: 8 PTAGKFVVVGGGIAGVTCAEQLATH--FPSEDILLVTA 43
>gi|11225256 uncoupling protein 1 [Homo sapiens]
Length = 307
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 118 SGASVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVG 156
SG LQ A+L GL D +EFL A + PS+G
Sbjct: 76 SGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLG 114
>gi|119703746 electron-transferring-flavoprotein dehydrogenase
precursor [Homo sapiens]
Length = 617
Score = 29.6 bits (65), Expect = 3.8
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 16 VLVVGGGIAGLGAAQRL----CGHSAFPHLRVLEATARAGGRIRSERCF--GGVVEVGAH 69
V++VG G AGL AA RL H + ++E A+ G S C G E+
Sbjct: 71 VVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPD 130
Query: 70 WIHGPSRGNPVFQLAAE--YGLLGEK 93
W +G P+ E +G+L EK
Sbjct: 131 W---KEKGAPLNTPVTEDRFGILTEK 153
>gi|118600963 Nik related kinase [Homo sapiens]
Length = 1582
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 133 LFYGLIDQTREF-----LHAAETPVPSVGEYLKKEIGQHVAGW--TEDEETRKLKLAVLN 185
++ GL ++T F ++A +TP+P +G ++ Q GW +++EE + +L +L
Sbjct: 39 IYLGLHEKTGAFTAVKVMNARKTPLPEIGRRVRVNKYQKSVGWRYSDEEEDLRTELNLLR 98
Query: 186 SF 187
+
Sbjct: 99 KY 100
>gi|14861834 cat eye syndrome chromosome region, candidate 5 isoform
2 precursor [Homo sapiens]
Length = 423
Score = 28.9 bits (63), Expect = 6.5
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 19/146 (13%)
Query: 21 GGIAGLGAAQRLCGHSAFPHLRVLEATAR---AGGRIRSERCFGGVVEVGAHWIHGPSRG 77
G +A LGAA+ LC +A + AR A G +S FG ++++ + RG
Sbjct: 5 GCVAALGAARGLCWRAARAAAGLQGRPARRCYAVGPAQSPPTFGFLLDIDGVLV----RG 60
Query: 78 NPVFQLAAEYGLLGEKELSQENQLVETGGHVGLPSVSYASSGASVSLQLVAEMATLFYGL 137
+ V A L +LV + G + +P V ++G + E++ L
Sbjct: 61 HRVIPAA----------LKAFRRLVNSQGQLRVPVVFVTNAGNILQHSKAQELSALLGCE 110
Query: 138 IDQTREFLHAAETPVPSVGEYLKKEI 163
+D + L + +P+ EY +K +
Sbjct: 111 VDADQVIL--SHSPMKLFSEYHEKRM 134
>gi|47551347 protease, serine-like 1 [Homo sapiens]
Length = 283
Score = 28.9 bits (63), Expect = 6.5
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 19/81 (23%)
Query: 24 AGLGAAQRLCGHSAFPHLRVLEATARAGGR-------------IRSERCFG------GVV 64
AG AQ + GH PH R A+ R GG+ + + CF G+V
Sbjct: 27 AGSWGAQIIGGHEVTPHSRPYMASVRFGGQHHCGGFLLRARWVVSAAHCFSHRDLRTGLV 86
Query: 65 EVGAHWIHGPSRGNPVFQLAA 85
+GAH + VF + A
Sbjct: 87 VLGAHVLSTAEPTQQVFGIDA 107
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,594,735
Number of Sequences: 37866
Number of extensions: 617646
Number of successful extensions: 1351
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1325
Number of HSP's gapped (non-prelim): 25
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.