Guide to the Human Genome
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Name: ETFDH Sequence: fasta or formatted (617aa) NCBI GI: 119703746
Description:

electron-transferring-flavoprotein dehydrogenase precursor

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         43           3
 C cysteine            2.3         14           1
 D aspartate           4.5         28           2
 E glutamate           6.2         38           2
 F phenylalanine       3.6         22           1
 G glycine             9.9         61           4
 H histidine           3.7         23           2
 I isoleucine          5.5         34           1
 K lysine              6.3         39           2
 L leucine             9.6         59           2
 M methionine          1.5          9           1
 N asparagine          4.2         26           2
 P proline             6.6         41           1
 Q glutamine           3.1         19           1
 R arginine            4.4         27           1
 S serine              4.5         28           2
 T threonine           4.7         29           2
 V valine              6.5         40           2
 W tryptophan          2.1         13           1
 Y tyrosine            3.9         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   electron-transferring-flavoprotein dehydrogenase pr... 
MAP4K1                0.007   mitogen-activated protein kinase kinase kinase kina...
MAP4K1                0.007   mitogen-activated protein kinase kinase kinase kinase...
DLD                   0.007   dihydrolipoamide dehydrogenase precursor 
AOF1                  0.006   amine oxidase (flavin containing) domain 1 
MICAL1                0.006   microtubule associated monoxygenase, calponin and L...
MICAL1                0.006   microtubule associated monoxygenase, calponin and L...
FOXRED1               0.006   FAD-dependent oxidoreductase domain containing 1 [Hom...
DYX1C1                0.005   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.005   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.005   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
LOC100291598          0.005   PREDICTED: hypothetical protein XP_002344998 
LOC100291087          0.005   PREDICTED: hypothetical protein XP_002347629 
LOC100287963          0.005   PREDICTED: hypothetical protein XP_002343458 
JHDM1D                0.005   jumonji C domain containing histone demethylase 1 ho...
MAOB                  0.004   monoamine oxidase B 
GSR                   0.004   glutathione reductase 
PAOX                  0.004   polyamine oxidase isoform 4 
PAOX                  0.004   polyamine oxidase isoform 2 
PAOX                  0.004   polyamine oxidase isoform 1 
NNT                   0.004   nicotinamide nucleotide transhydrogenase 
NNT                   0.004   nicotinamide nucleotide transhydrogenase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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