Search of human proteins with 45827776

Search of human proteins with 45827776

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45827776 reticulon 1 isoform C [Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45827776 reticulon 1 isoform C [Homo sapiens]                      405   e-113
gi|45827778 reticulon 1 isoform B [Homo sapiens]                      364   e-101
gi|10863935 reticulon 1 isoform A [Homo sapiens]                      364   e-101
gi|5902016 reticulon 4 isoform C [Homo sapiens]                       277   5e-75
gi|47519562 reticulon 4 isoform E [Homo sapiens]                      269   1e-72
gi|24431935 reticulon 4 isoform A [Homo sapiens]                      269   1e-72
gi|47519490 reticulon 4 isoform D [Homo sapiens]                      268   2e-72
gi|24431933 reticulon 4 isoform B [Homo sapiens]                      268   3e-72
gi|41393604 reticulon 3 isoform c [Homo sapiens]                      236   1e-62
gi|41393608 reticulon 3 isoform b [Homo sapiens]                      233   7e-62
gi|5174655 reticulon 3 isoform a [Homo sapiens]                       233   7e-62
gi|41393606 reticulon 3 isoform d [Homo sapiens]                      200   6e-52
gi|5032055 reticulon 2 isoform A [Homo sapiens]                       197   5e-51
gi|46255007 reticulon 2 isoform C [Homo sapiens]                      197   5e-51
gi|46255005 reticulon 2 isoform B [Homo sapiens]                      196   2e-50
gi|45827800 prestin isoform b [Homo sapiens]                           30   1.5  
gi|39752683 prestin isoform a [Homo sapiens]                           30   1.5  
gi|45827802 prestin isoform c [Homo sapiens]                           30   1.9  
gi|46049063 exportin 6 [Homo sapiens]                                  30   1.9  
gi|4557535 solute carrier family 26, member 3 [Homo sapiens]           28   5.5  
gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]            28   7.2  
gi|16418457 solute carrier family 26, member 8 isoform a [Homo s...    28   7.2  
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s...    28   7.2  
gi|157785668 coiled-coil domain containing 39 [Homo sapiens]           28   7.2  
gi|4504683 interleukin 8 receptor beta [Homo sapiens]                  27   9.4  
gi|27881499 solute carrier family 35, member C2 isoform a [Homo ...    27   9.4  
gi|21314776 solute carrier family 35, member C2 isoform a [Homo ...    27   9.4  

>gi|45827776 reticulon 1 isoform C [Homo sapiens]
          Length = 208

 Score =  405 bits (1042), Expect = e-113
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MQATADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLA 60
           MQATADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLA
Sbjct: 1   MQATADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLA 60

Query: 61  LAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLK 120
           LAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLK
Sbjct: 61  LAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLK 120

Query: 121 ELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQ 180
           ELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQ
Sbjct: 121 ELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQ 180

Query: 181 YLGLVRTHINAVVAKIQAKIPGAKRHAE 208
           YLGLVRTHINAVVAKIQAKIPGAKRHAE
Sbjct: 181 YLGLVRTHINAVVAKIQAKIPGAKRHAE 208


>gi|45827778 reticulon 1 isoform B [Homo sapiens]
          Length = 356

 Score =  364 bits (935), Expect = e-101
 Identities = 189/191 (98%), Positives = 190/191 (99%)

Query: 18  KSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 77
           K +AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL
Sbjct: 166 KQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 225

Query: 78  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 137
           QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF
Sbjct: 226 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 285

Query: 138 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ 197
           AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ
Sbjct: 286 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ 345

Query: 198 AKIPGAKRHAE 208
           AKIPGAKRHAE
Sbjct: 346 AKIPGAKRHAE 356


>gi|10863935 reticulon 1 isoform A [Homo sapiens]
          Length = 776

 Score =  364 bits (935), Expect = e-101
 Identities = 189/191 (98%), Positives = 190/191 (99%)

Query: 18  KSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 77
           K +AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL
Sbjct: 586 KQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645

Query: 78  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 137
           QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF
Sbjct: 646 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705

Query: 138 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ 197
           AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ
Sbjct: 706 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ 765

Query: 198 AKIPGAKRHAE 208
           AKIPGAKRHAE
Sbjct: 766 AKIPGAKRHAE 776


>gi|5902016 reticulon 4 isoform C [Homo sapiens]
          Length = 199

 Score =  277 bits (708), Expect = 5e-75
 Identities = 133/199 (66%), Positives = 165/199 (82%)

Query: 10  MDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATIS 69
           MD    NWK + +DLLYWRDIK+TG+VFG+ L LL SLT FS+VSV AY+ALA LS TIS
Sbjct: 1   MDGQKKNWKDKVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTIS 60

Query: 70  FRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQ 129
           FRIYK V+QA+QK+DEGHPF+AYLE E+ +S+E +QKY++    +VN T+KELRRLFLV 
Sbjct: 61  FRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVD 120

Query: 130 DLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHI 189
           DLVDSLKFAVLMW+ TYVGALFNGLTLL++A++S+F++PV+Y +HQAQID YLGL   ++
Sbjct: 121 DLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNV 180

Query: 190 NAVVAKIQAKIPGAKRHAE 208
              +AKIQAKIPG KR AE
Sbjct: 181 KDAMAKIQAKIPGLKRKAE 199


>gi|47519562 reticulon 4 isoform E [Homo sapiens]
          Length = 986

 Score =  269 bits (688), Expect = 1e-72
 Identities = 129/191 (67%), Positives = 161/191 (84%)

Query: 18  KSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 77
           K+  +DLLYWRDIK+TG+VFG+ L LL SLT FS+VSV AY+ALA LS TISFRIYK V+
Sbjct: 796 KTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 855

Query: 78  QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 137
           QA+QK+DEGHPF+AYLE E+ +S+E +QKY++    +VN T+KELRRLFLV DLVDSLKF
Sbjct: 856 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 915

Query: 138 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ 197
           AVLMW+ TYVGALFNGLTLL++A++S+F++PV+Y +HQAQID YLGL   ++   +AKIQ
Sbjct: 916 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 975

Query: 198 AKIPGAKRHAE 208
           AKIPG KR AE
Sbjct: 976 AKIPGLKRKAE 986


>gi|24431935 reticulon 4 isoform A [Homo sapiens]
          Length = 1192

 Score =  269 bits (688), Expect = 1e-72
 Identities = 129/191 (67%), Positives = 161/191 (84%)

Query: 18   KSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 77
            K+  +DLLYWRDIK+TG+VFG+ L LL SLT FS+VSV AY+ALA LS TISFRIYK V+
Sbjct: 1002 KTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 1061

Query: 78   QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 137
            QA+QK+DEGHPF+AYLE E+ +S+E +QKY++    +VN T+KELRRLFLV DLVDSLKF
Sbjct: 1062 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 1121

Query: 138  AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ 197
            AVLMW+ TYVGALFNGLTLL++A++S+F++PV+Y +HQAQID YLGL   ++   +AKIQ
Sbjct: 1122 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 1181

Query: 198  AKIPGAKRHAE 208
            AKIPG KR AE
Sbjct: 1182 AKIPGLKRKAE 1192


>gi|47519490 reticulon 4 isoform D [Homo sapiens]
          Length = 392

 Score =  268 bits (685), Expect = 2e-72
 Identities = 129/190 (67%), Positives = 160/190 (84%)

Query: 19  SQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 78
           S  +DLLYWRDIK+TG+VFG+ L LL SLT FS+VSV AY+ALA LS TISFRIYK V+Q
Sbjct: 203 SAVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 262

Query: 79  AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 138
           A+QK+DEGHPF+AYLE E+ +S+E +QKY++    +VN T+KELRRLFLV DLVDSLKFA
Sbjct: 263 AIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 322

Query: 139 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQA 198
           VLMW+ TYVGALFNGLTLL++A++S+F++PV+Y +HQAQID YLGL   ++   +AKIQA
Sbjct: 323 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQA 382

Query: 199 KIPGAKRHAE 208
           KIPG KR AE
Sbjct: 383 KIPGLKRKAE 392


>gi|24431933 reticulon 4 isoform B [Homo sapiens]
          Length = 373

 Score =  268 bits (684), Expect = 3e-72
 Identities = 129/190 (67%), Positives = 160/190 (84%)

Query: 19  SQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 78
           S  +DLLYWRDIK+TG+VFG+ L LL SLT FS+VSV AY+ALA LS TISFRIYK V+Q
Sbjct: 184 SVVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 243

Query: 79  AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 138
           A+QK+DEGHPF+AYLE E+ +S+E +QKY++    +VN T+KELRRLFLV DLVDSLKFA
Sbjct: 244 AIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 303

Query: 139 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQA 198
           VLMW+ TYVGALFNGLTLL++A++S+F++PV+Y +HQAQID YLGL   ++   +AKIQA
Sbjct: 304 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQA 363

Query: 199 KIPGAKRHAE 208
           KIPG KR AE
Sbjct: 364 KIPGLKRKAE 373


>gi|41393604 reticulon 3 isoform c [Homo sapiens]
          Length = 255

 Score =  236 bits (601), Expect = 1e-62
 Identities = 114/191 (59%), Positives = 152/191 (79%), Gaps = 1/191 (0%)

Query: 19  SQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 78
           SQ  DL++WRD+K+TG VFG+ L++L SL  FSV+SVV+YL LA LS TISFRIYKSV+Q
Sbjct: 65  SQVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQ 124

Query: 79  AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 138
           AVQK++EGHPFKAYL+++ITLS E    Y +    ++N  LK + RLFLV+DLVDSLK A
Sbjct: 125 AVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLA 184

Query: 139 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQA 198
           V MWL+TYVGA+FNG+TLL++A + +F++P+VY K++ QID Y+G+ R    ++V KIQA
Sbjct: 185 VFMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQA 244

Query: 199 KIPG-AKRHAE 208
           K+PG AK+ AE
Sbjct: 245 KLPGIAKKKAE 255


>gi|41393608 reticulon 3 isoform b [Homo sapiens]
          Length = 1013

 Score =  233 bits (595), Expect = 7e-62
 Identities = 112/187 (59%), Positives = 150/187 (80%), Gaps = 1/187 (0%)

Query: 23   DLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQK 82
            DL++WRD+K+TG VFG+ L++L SL  FSV+SVV+YL LA LS TISFRIYKSV+QAVQK
Sbjct: 827  DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAVQK 886

Query: 83   TDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMW 142
            ++EGHPFKAYL+++ITLS E    Y +    ++N  LK + RLFLV+DLVDSLK AV MW
Sbjct: 887  SEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMW 946

Query: 143  LLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPG 202
            L+TYVGA+FNG+TLL++A + +F++P+VY K++ QID Y+G+ R    ++V KIQAK+PG
Sbjct: 947  LMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 1006

Query: 203  -AKRHAE 208
             AK+ AE
Sbjct: 1007 IAKKKAE 1013


>gi|5174655 reticulon 3 isoform a [Homo sapiens]
          Length = 236

 Score =  233 bits (595), Expect = 7e-62
 Identities = 112/187 (59%), Positives = 150/187 (80%), Gaps = 1/187 (0%)

Query: 23  DLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQK 82
           DL++WRD+K+TG VFG+ L++L SL  FSV+SVV+YL LA LS TISFRIYKSV+QAVQK
Sbjct: 50  DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAVQK 109

Query: 83  TDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMW 142
           ++EGHPFKAYL+++ITLS E    Y +    ++N  LK + RLFLV+DLVDSLK AV MW
Sbjct: 110 SEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMW 169

Query: 143 LLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPG 202
           L+TYVGA+FNG+TLL++A + +F++P+VY K++ QID Y+G+ R    ++V KIQAK+PG
Sbjct: 170 LMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 229

Query: 203 -AKRHAE 208
            AK+ AE
Sbjct: 230 IAKKKAE 236


>gi|41393606 reticulon 3 isoform d [Homo sapiens]
          Length = 241

 Score =  200 bits (509), Expect = 6e-52
 Identities = 94/153 (61%), Positives = 126/153 (82%)

Query: 23  DLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQK 82
           DL++WRD+K+TG VFG+ L++L SL  FSV+SVV+YL LA LS TISFRIYKSV+QAVQK
Sbjct: 50  DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAVQK 109

Query: 83  TDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMW 142
           ++EGHPFKAYL+++ITLS E    Y +    ++N  LK + RLFLV+DLVDSLK AV MW
Sbjct: 110 SEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMW 169

Query: 143 LLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQ 175
           L+TYVGA+FNG+TLL++A + +F++P+VY K++
Sbjct: 170 LMTYVGAVFNGITLLILAELLIFSVPIVYEKYK 202


>gi|5032055 reticulon 2 isoform A [Homo sapiens]
          Length = 545

 Score =  197 bits (501), Expect = 5e-51
 Identities = 94/184 (51%), Positives = 138/184 (75%)

Query: 19  SQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 78
           S+  DLLYW+D + +G+VF   ++ L  L  FS+VSV A+LAL  L  TIS R+Y+ VLQ
Sbjct: 343 SKVADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQ 402

Query: 79  AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 138
           AV + D  +PF+AYL++++TL++EQ ++ +  +   V S   +LR  FLV+DLVDSLK A
Sbjct: 403 AVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLA 462

Query: 139 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQA 198
           +L ++LT+VGA+FNGLTLL++ V+ +FT+P++Y +HQAQIDQY+GLV   ++ + AKI+A
Sbjct: 463 LLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRA 522

Query: 199 KIPG 202
           KIPG
Sbjct: 523 KIPG 526


>gi|46255007 reticulon 2 isoform C [Homo sapiens]
          Length = 205

 Score =  197 bits (501), Expect = 5e-51
 Identities = 94/184 (51%), Positives = 138/184 (75%)

Query: 19  SQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 78
           S+  DLLYW+D + +G+VF   ++ L  L  FS+VSV A+LAL  L  TIS R+Y+ VLQ
Sbjct: 3   SKVADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQ 62

Query: 79  AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 138
           AV + D  +PF+AYL++++TL++EQ ++ +  +   V S   +LR  FLV+DLVDSLK A
Sbjct: 63  AVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLA 122

Query: 139 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQA 198
           +L ++LT+VGA+FNGLTLL++ V+ +FT+P++Y +HQAQIDQY+GLV   ++ + AKI+A
Sbjct: 123 LLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRA 182

Query: 199 KIPG 202
           KIPG
Sbjct: 183 KIPG 186


>gi|46255005 reticulon 2 isoform B [Homo sapiens]
          Length = 472

 Score =  196 bits (497), Expect = 2e-50
 Identities = 93/180 (51%), Positives = 136/180 (75%)

Query: 23  DLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQK 82
           DLLYW+D + +G+VF   ++ L  L  FS+VSV A+LAL  L  TIS R+Y+ VLQAV +
Sbjct: 274 DLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAVHR 333

Query: 83  TDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMW 142
            D  +PF+AYL++++TL++EQ ++ +  +   V S   +LR  FLV+DLVDSLK A+L +
Sbjct: 334 GDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFY 393

Query: 143 LLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPG 202
           +LT+VGA+FNGLTLL++ V+ +FT+P++Y +HQAQIDQY+GLV   ++ + AKI+AKIPG
Sbjct: 394 ILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIPG 453


>gi|45827800 prestin isoform b [Homo sapiens]
          Length = 685

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 136 KFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK 195
           K  + +WL T+V +LF GL   L+  V +  L V+Y   + Q   Y  L +     V   
Sbjct: 466 KIELTIWLTTFVSSLFLGLDYGLITAVIIALLTVIY---RTQSPSYKVLGKLPETDVYID 522

Query: 196 IQA-----KIPGAK 204
           I A     +IPG K
Sbjct: 523 IDAYEEVKEIPGIK 536


>gi|39752683 prestin isoform a [Homo sapiens]
          Length = 744

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 136 KFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK 195
           K  + +WL T+V +LF GL   L+  V +  L V+Y   + Q   Y  L +     V   
Sbjct: 466 KIELTIWLTTFVSSLFLGLDYGLITAVIIALLTVIY---RTQSPSYKVLGKLPETDVYID 522

Query: 196 IQA-----KIPGAK 204
           I A     +IPG K
Sbjct: 523 IDAYEEVKEIPGIK 536


>gi|45827802 prestin isoform c [Homo sapiens]
          Length = 516

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 136 KFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVY 171
           K  + +WL T+V +LF GL   L+  V +  L V+Y
Sbjct: 466 KIELTIWLTTFVSSLFLGLDYGLITAVIIALLTVIY 501


>gi|46049063 exportin 6 [Homo sapiens]
          Length = 1125

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 76  VLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKEL 122
           +LQ + K +  H  K+ LE    L +  I+K+TD L+ +V+  L+ +
Sbjct: 343 LLQKITKDNNAHTVKSRLE---ELDESYIEKFTDFLRLFVSVHLRRI 386


>gi|4557535 solute carrier family 26, member 3 [Homo sapiens]
          Length = 764

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 136 KFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHI 189
           K+  L+W++T++  +  GL L L A V+   L +V+     +      + RT+I
Sbjct: 466 KYDCLIWIMTFIFTIVLGLGLGLAASVAFQLLTIVFRTQFPKCSTLANIGRTNI 519


>gi|194018488 peroxisomal biogenesis factor 6 [Homo sapiens]
          Length = 980

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 153 GLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIP 201
           G TLL  AV +  +L  + VK    I+ Y+G    ++  V A+ +A  P
Sbjct: 749 GKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 797


>gi|16418457 solute carrier family 26, member 8 isoform a [Homo
           sapiens]
          Length = 970

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 2/39 (5%)

Query: 141 MWLLTYVGALFNGLTL-LLMAVVSMFTLPVVYVKHQAQI 178
           +W++T+  ++F GL + L+++VVS F +  V   H+A+I
Sbjct: 489 LWMMTFSSSIFLGLDIGLIISVVSAFFITTVR-SHRAKI 526


>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
           sapiens]
          Length = 865

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 2/39 (5%)

Query: 141 MWLLTYVGALFNGLTL-LLMAVVSMFTLPVVYVKHQAQI 178
           +W++T+  ++F GL + L+++VVS F +  V   H+A+I
Sbjct: 384 LWMMTFSSSIFLGLDIGLIISVVSAFFITTVR-SHRAKI 421


>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
          Length = 941

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 76  VLQAVQKTDEGHPFK--AYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRL 125
           +L  V    EG   K  AY  ++    +E++Q+  DCL   +N   KE+  L
Sbjct: 644 ILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDCLDAKINKAEKEIYAL 695


>gi|4504683 interleukin 8 receptor beta [Homo sapiens]
          Length = 360

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 10/63 (15%)

Query: 21  AIDLLYWRDIKQTGIVFGSFLLLLFSLTQ----------FSVVSVVAYLALAALSATISF 70
           A+ L  W   K  G +FG+FL  + SL +           + +SV  YLA+   + T++ 
Sbjct: 98  ALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ 157

Query: 71  RIY 73
           + Y
Sbjct: 158 KRY 160


>gi|27881499 solute carrier family 35, member C2 isoform a [Homo
           sapiens]
          Length = 365

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 4   TADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALA 62
           TA +T +D   SNW    + +  +   K + ++F     L+F L +     V+  L +A
Sbjct: 90  TALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIA 148


>gi|21314776 solute carrier family 35, member C2 isoform a [Homo
           sapiens]
          Length = 365

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 4   TADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALA 62
           TA +T +D   SNW    + +  +   K + ++F     L+F L +     V+  L +A
Sbjct: 90  TALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIA 148


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,079,948
Number of Sequences: 37866
Number of extensions: 199662
Number of successful extensions: 739
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 28
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.