RTN1 30088

Name: RTN1	Sequence: fasta or formatted (208aa)		NCBI GI: 45827776
Description: reticulon 1 isoform C		Referenced in: Oligodendrocytes and Myelin
Other entries for this name: alt prot [776aa] reticulon 1 isoform A alt prot [356aa] reticulon 1 isoform B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 19 2 C cysteine 1.0 2 1 D aspartate 4.3 9 1 E glutamate 2.9 6 1 F phenylalanine 5.3 11 1 G glycine 3.4 7 1 H histidine 1.9 4 1 I isoleucine 5.3 11 1 K lysine 6.2 13 1 L leucine 15.4 32 4 M methionine 2.4 5 1 N asparagine 1.9 4 1 P proline 1.4 3 1 Q glutamine 7.2 15 1 R arginine 2.9 6 2 S serine 6.7 14 1 T threonine 6.2 13 1 V valine 10.1 21 2 W tryptophan 1.9 4 1 Y tyrosine 4.3 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 reticulon 1 isoform C RTN1 0.892 reticulon 1 isoform B RTN1 0.892 reticulon 1 isoform A RTN4 0.663 reticulon 4 isoform C RTN4 0.642 reticulon 4 isoform E RTN4 0.642 reticulon 4 isoform A RTN4 0.639 reticulon 4 isoform D RTN4 0.639 reticulon 4 isoform B RTN3 0.555 reticulon 3 isoform c RTN3 0.547 reticulon 3 isoform b RTN3 0.547 reticulon 3 isoform a RTN3 0.461 reticulon 3 isoform d RTN2 0.453 reticulon 2 isoform A RTN2 0.453 reticulon 2 isoform C RTN2 0.450 reticulon 2 isoform B SLC26A5 0.013 prestin isoform b SLC26A5 0.013 prestin isoform a SLC26A5 0.013 prestin isoform c XPO6 0.013 exportin 6 SLC26A3 0.008 solute carrier family 26, member 3 PEX6 0.008 peroxisomal biogenesis factor 6 SLC26A8 0.008 solute carrier family 26, member 8 isoform a SLC26A8 0.008 solute carrier family 26, member 8 isoform b CCDC39 0.008 coiled-coil domain containing 39 IL8RB 0.005 interleukin 8 receptor beta SLC35C2 0.005 solute carrier family 35, member C2 isoform a SLC35C2 0.005 solute carrier family 35, member C2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.