Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13129108
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13129108 melanophilin isoform 1 [Homo sapiens]
(600 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13129108 melanophilin isoform 1 [Homo sapiens] 1198 0.0
gi|109826351 melanophilin isoform 2 [Homo sapiens] 1128 0.0
gi|59853352 myosin VIIA and Rab interacting protein [Homo sapiens] 171 1e-42
gi|193804862 synaptotagmin-like 4 [Homo sapiens] 74 4e-13
gi|193804860 synaptotagmin-like 4 [Homo sapiens] 74 4e-13
gi|110227631 synaptotagmin-like 3 [Homo sapiens] 68 2e-11
gi|254039650 synaptotagmin-like 5 isoform 1 [Homo sapiens] 66 8e-11
gi|254039648 synaptotagmin-like 5 isoform 2 [Homo sapiens] 66 8e-11
gi|20270305 synaptotagmin-like 5 isoform 1 [Homo sapiens] 66 8e-11
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 50 6e-06
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 50 6e-06
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 47 5e-05
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 47 5e-05
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens] 45 2e-04
gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens] 44 3e-04
gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens] 44 3e-04
gi|60097902 filaggrin [Homo sapiens] 42 0.002
gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens] 41 0.003
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 41 0.003
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 41 0.004
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 41 0.004
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 40 0.006
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 40 0.006
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 40 0.008
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 40 0.008
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 40 0.008
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 40 0.008
gi|194328736 PHD finger protein 10 isoform b [Homo sapiens] 40 0.008
gi|194328734 PHD finger protein 10 isoform a [Homo sapiens] 40 0.008
gi|5902064 rabphilin 3A-like (without C2 domains) [Homo sapiens] 40 0.008
>gi|13129108 melanophilin isoform 1 [Homo sapiens]
Length = 600
Score = 1198 bits (3100), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN 60
MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN
Sbjct: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN 60
Query: 61 ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW 120
ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW
Sbjct: 61 ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW 120
Query: 121 YYEHVKARFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQ 180
YYEHVKARFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQ
Sbjct: 121 YYEHVKARFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQ 180
Query: 181 PFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHK 240
PFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHK
Sbjct: 181 PFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHK 240
Query: 241 AEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRN 300
AEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRN
Sbjct: 241 AEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRN 300
Query: 301 EQLPLQYLADVDTSDEESIRAHVMASHHSKRRGRASSESQIFELNKHISAVECLLTYLEN 360
EQLPLQYLADVDTSDEESIRAHVMASHHSKRRGRASSESQIFELNKHISAVECLLTYLEN
Sbjct: 301 EQLPLQYLADVDTSDEESIRAHVMASHHSKRRGRASSESQIFELNKHISAVECLLTYLEN 360
Query: 361 TVVPPLAKGLGAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKS 420
TVVPPLAKGLGAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKS
Sbjct: 361 TVVPPLAKGLGAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKS 420
Query: 421 VGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE 480
VGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE
Sbjct: 421 VGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE 480
Query: 481 SEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA 540
SEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA
Sbjct: 481 SEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA 540
Query: 541 MAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYRGSLTQRNPNARKGMASHTFAKPVVAHQS 600
MAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYRGSLTQRNPNARKGMASHTFAKPVVAHQS
Sbjct: 541 MAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYRGSLTQRNPNARKGMASHTFAKPVVAHQS 600
>gi|109826351 melanophilin isoform 2 [Homo sapiens]
Length = 572
Score = 1128 bits (2918), Expect = 0.0
Identities = 572/600 (95%), Positives = 572/600 (95%), Gaps = 28/600 (4%)
Query: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN 60
MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN
Sbjct: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN 60
Query: 61 ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW 120
ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW
Sbjct: 61 ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW 120
Query: 121 YYEHVKARFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQ 180
YYEHVKARFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQ
Sbjct: 121 YYEHVKARFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQ 180
Query: 181 PFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHK 240
PFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHK
Sbjct: 181 PFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHK 240
Query: 241 AEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRN 300
AEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRN
Sbjct: 241 AEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRN 300
Query: 301 EQLPLQYLADVDTSDEESIRAHVMASHHSKRRGRASSESQIFELNKHISAVECLLTYLEN 360
EQLPLQYLADVDTSDEESIRAHVMASHHSKRRGRASSESQ
Sbjct: 301 EQLPLQYLADVDTSDEESIRAHVMASHHSKRRGRASSESQ-------------------- 340
Query: 361 TVVPPLAKGLGAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKS 420
GLGAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKS
Sbjct: 341 --------GLGAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKS 392
Query: 421 VGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE 480
VGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE
Sbjct: 393 VGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE 452
Query: 481 SEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA 540
SEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA
Sbjct: 453 SEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA 512
Query: 541 MAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYRGSLTQRNPNARKGMASHTFAKPVVAHQS 600
MAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYRGSLTQRNPNARKGMASHTFAKPVVAHQS
Sbjct: 513 MAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYRGSLTQRNPNARKGMASHTFAKPVVAHQS 572
>gi|59853352 myosin VIIA and Rab interacting protein [Homo sapiens]
Length = 859
Score = 171 bits (434), Expect = 1e-42
Identities = 110/291 (37%), Positives = 159/291 (54%), Gaps = 16/291 (5%)
Query: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN 60
MG+KLDLS LTD+E +HVL+VVQRDF+LR+KEEERL LK K+ +E SK +LS
Sbjct: 1 MGRKLDLSGLTDDETEHVLQVVQRDFNLRKKEEERLSELKQKLDEEGSKCSILSKHQQFV 60
Query: 61 ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW 120
E C RC P+ LVN+KRQC +C CKSC E+ W+C C AR+++ SLEW
Sbjct: 61 EHCCMRCCSPFTFLVNTKRQCGDCKFNVCKSCCSYQKHEKAWVCCVCQQARLLRAQSLEW 120
Query: 121 YYEHVKARFKRFGSAKVIRSLH--GRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQ 178
+Y +VK+RFKRFGSAKV+++L+ RL+ GA +++ +S+ +E GS++
Sbjct: 121 FYNNVKSRFKRFGSAKVLKNLYRKHRLESGACFDILGGSLF-ESNLENEGSISGSDSTFY 179
Query: 179 AQPFGSKKKRLLSVH-DFDFEGDSDDSTQPQGHSLHLSSVPEA---RDSPQSLTDESCSE 234
Q G L+V E + ++ + + L EA RD + LT+E +
Sbjct: 180 RQSEGHSVMDTLAVALRVAEEAIEEAISKAEAYGDSLDKQNEASYLRDHKEELTEELATT 239
Query: 235 ------KAAPHKAEGLEEADTG---ASGCHSHPEEQPTSISPSRHGALAEL 276
+ K+E E + G C + ++ TS SP + A A L
Sbjct: 240 ILQKIIRKQKSKSEQQVEEEPGWPHPQSCSTKVADEGTSASPGGYRAPAAL 290
Score = 52.0 bits (123), Expect = 2e-06
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 454 YNRTTDEELSELEDRVAVTASEVQQAESEVSDIESRIAALRAAGLTVKPSGKPRRKSNLP 513
++ T + L++LED+VA A++V AE ++SDIESRI+AL AGL + P + R+ +
Sbjct: 726 HSGTDETHLADLEDQVATAAAQVHHAELQISDIESRISALTIAGLNIAPCVRFTRRRDQK 785
Query: 514 IFLPRVAGKLGKRPEDPNADPS-SEAKAMAVPYLLRRKFSNSLKSQGKDDDSFDRKSVYR 572
+R + D S + + + P + K S + K +F+ + +
Sbjct: 786 -----------QRTQVQTIDTSRQQRRKLPAPPVKAEKIETSSVTTIK---TFNHNFILQ 831
Query: 573 GSLTQRNPNARKG 585
GS T R RKG
Sbjct: 832 GSSTNRT-KERKG 843
>gi|193804862 synaptotagmin-like 4 [Homo sapiens]
Length = 671
Score = 73.9 bits (180), Expect = 4e-13
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKG---KIKKESSKRELLSDTA 57
M + LDLS L++EE +L V+QRD ++R+ +E+R+ LK +IK++ +KR +
Sbjct: 1 MSELLDLSFLSEEEKDLILSVLQRDEEVRKADEKRIRRLKNELLEIKRKGAKR----GSQ 56
Query: 58 HLNETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGS 117
H ++ CARC + L C C C+ C R+ W C C +K +
Sbjct: 57 HYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDC-RIQESNGTWRCKVCAKEIELKKAT 115
Query: 118 LEWYYEHVKARFKRFGSAKVIR 139
+W+Y+ RF +++IR
Sbjct: 116 GDWFYDQKVNRFAYRTGSEIIR 137
>gi|193804860 synaptotagmin-like 4 [Homo sapiens]
Length = 671
Score = 73.9 bits (180), Expect = 4e-13
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKG---KIKKESSKRELLSDTA 57
M + LDLS L++EE +L V+QRD ++R+ +E+R+ LK +IK++ +KR +
Sbjct: 1 MSELLDLSFLSEEEKDLILSVLQRDEEVRKADEKRIRRLKNELLEIKRKGAKR----GSQ 56
Query: 58 HLNETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGS 117
H ++ CARC + L C C C+ C R+ W C C +K +
Sbjct: 57 HYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDC-RIQESNGTWRCKVCAKEIELKKAT 115
Query: 118 LEWYYEHVKARFKRFGSAKVIR 139
+W+Y+ RF +++IR
Sbjct: 116 GDWFYDQKVNRFAYRTGSEIIR 137
>gi|110227631 synaptotagmin-like 3 [Homo sapiens]
Length = 542
Score = 68.2 bits (165), Expect = 2e-11
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 1 MGKKLDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLN 60
M +++DLS L + E + +L+V+ RD ++ EEER LK ++ K +D H
Sbjct: 1 MAQEIDLSALKELEREAILQVLYRDQAVQNTEEERTRKLKTHLQHLRWKGAKNTDWEH-K 59
Query: 61 ETHCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEW 120
E CARC Q L++ C C C C W C C R VKI + EW
Sbjct: 60 EKCCARCQQVLGFLLHRGAVCRGCSHRVCAQCRVFLRGTHAWKCTVCFEDRNVKIKTGEW 119
Query: 121 YYEHVKARFKRFGSAKVI 138
+YE +F G + +
Sbjct: 120 FYEERAKKFPTGGKHETV 137
>gi|254039650 synaptotagmin-like 5 isoform 1 [Homo sapiens]
Length = 730
Score = 66.2 bits (160), Expect = 8e-11
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 5 LDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKI---KKESSKRELLSDTAHLNE 61
++LS L D E + +L V++RD L++ E++R+ LK ++ K+ S K + +
Sbjct: 8 INLSFLLDHEKEMILGVLKRDEYLKKVEDKRIRKLKNELLEAKRRSGKTQQEASRV---- 63
Query: 62 THCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEWY 121
C C + L+ + C C L C+ C RV W C C ++I + EW+
Sbjct: 64 --CVHCHRNLGLIFDRGDPCQACSLRVCREC-RVAGPNGSWKCTVCDKIAQLRIITGEWF 120
Query: 122 YEHVKARFKRFG--SAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQA 179
+E RFK+ V+R R GA E+ D++++D G +A
Sbjct: 121 FEEKAKRFKQVNVLGTDVVRQSILRRSPGAEEVQSQEQTRQDAEKSDTSPVAGKKASHD- 179
Query: 180 QPFGSKKKRLL 190
G K+K L
Sbjct: 180 ---GPKRKGFL 187
>gi|254039648 synaptotagmin-like 5 isoform 2 [Homo sapiens]
Length = 752
Score = 66.2 bits (160), Expect = 8e-11
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 5 LDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKI---KKESSKRELLSDTAHLNE 61
++LS L D E + +L V++RD L++ E++R+ LK ++ K+ S K + +
Sbjct: 8 INLSFLLDHEKEMILGVLKRDEYLKKVEDKRIRKLKNELLEAKRRSGKTQQEASRV---- 63
Query: 62 THCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEWY 121
C C + L+ + C C L C+ C RV W C C ++I + EW+
Sbjct: 64 --CVHCHRNLGLIFDRGDPCQACSLRVCREC-RVAGPNGSWKCTVCDKIAQLRIITGEWF 120
Query: 122 YEHVKARFKRFG--SAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQA 179
+E RFK+ V+R R GA E+ D++++D G +A
Sbjct: 121 FEEKAKRFKQVNVLGTDVVRQSILRRSPGAEEVQSQEQTRQDAEKSDTSPVAGKKASHD- 179
Query: 180 QPFGSKKKRLL 190
G K+K L
Sbjct: 180 ---GPKRKGFL 187
>gi|20270305 synaptotagmin-like 5 isoform 1 [Homo sapiens]
Length = 730
Score = 66.2 bits (160), Expect = 8e-11
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 5 LDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKI---KKESSKRELLSDTAHLNE 61
++LS L D E + +L V++RD L++ E++R+ LK ++ K+ S K + +
Sbjct: 8 INLSFLLDHEKEMILGVLKRDEYLKKVEDKRIRKLKNELLEAKRRSGKTQQEASRV---- 63
Query: 62 THCARCLQPYQLLVNSKRQCLECGLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEWY 121
C C + L+ + C C L C+ C RV W C C ++I + EW+
Sbjct: 64 --CVHCHRNLGLIFDRGDPCQACSLRVCREC-RVAGPNGSWKCTVCDKIAQLRIITGEWF 120
Query: 122 YEHVKARFKRFG--SAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQA 179
+E RFK+ V+R R GA E+ D++++D G +A
Sbjct: 121 FEEKAKRFKQVNVLGTDVVRQSILRRSPGAEEVQSQEQTRQDAEKSDTSPVAGKKASHD- 179
Query: 180 QPFGSKKKRLL 190
G K+K L
Sbjct: 180 ---GPKRKGFL 187
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 50.1 bits (118), Expect = 6e-06
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 23/259 (8%)
Query: 10 LTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLNETHCARCLQ 69
L ++AQ EV+ + + ++ + K K+ + ++R+ L +T H LQ
Sbjct: 905 LLPKDAQPCREVISTLLEKMKIDKRNYQIGKTKVFLKETERQALQETLHREVVRKILLLQ 964
Query: 70 PYQLLVNSKRQCLEC--GLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEWYYEHVKA 127
+ +V +R L+ T ++C R + + A V S Y++
Sbjct: 965 SWFRMVLERRHFLQMKRAAVTIQACWRSYRVRRALERTQ---AAVYLQASWRGYWQRKLY 1021
Query: 128 RFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTD--EDGEPGSEAQAQAQPFGSK 185
R ++ ++ G LQ + ++ISE++ + + + E G+E Q Q G +
Sbjct: 1022 RHQKQSIIRLQSLCRGHLQRKSFSQMISEKQKAEEKEREALEAARAGAEEGGQGQAAGGQ 1081
Query: 186 KKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHKAEGLE 245
+ ++ +P HL+S PE + S +S + S EK AP + L
Sbjct: 1082 QV-------------AEQGPEPAEDGGHLASEPEVQPSDRSPLEHSSPEKEAPSPEKTLP 1128
Query: 246 EADTGASGCHSHPEEQPTS 264
T A+ H E+ P+S
Sbjct: 1129 PQKTVAAESH---EKVPSS 1144
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 50.1 bits (118), Expect = 6e-06
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 23/259 (8%)
Query: 10 LTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLNETHCARCLQ 69
L ++AQ EV+ + + ++ + K K+ + ++R+ L +T H LQ
Sbjct: 905 LLPKDAQPCREVISTLLEKMKIDKRNYQIGKTKVFLKETERQALQETLHREVVRKILLLQ 964
Query: 70 PYQLLVNSKRQCLEC--GLFTCKSCGRVHPEEQGWICDPCHLARVVKIGSLEWYYEHVKA 127
+ +V +R L+ T ++C R + + A V S Y++
Sbjct: 965 SWFRMVLERRHFLQMKRAAVTIQACWRSYRVRRALERTQ---AAVYLQASWRGYWQRKLY 1021
Query: 128 RFKRFGSAKVIRSLHGRLQGGAGPELISEERSGDSDQTD--EDGEPGSEAQAQAQPFGSK 185
R ++ ++ G LQ + ++ISE++ + + + E G+E Q Q G +
Sbjct: 1022 RHQKQSIIRLQSLCRGHLQRKSFSQMISEKQKAEEKEREALEAARAGAEEGGQGQAAGGQ 1081
Query: 186 KKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHKAEGLE 245
+ ++ +P HL+S PE + S +S + S EK AP + L
Sbjct: 1082 QV-------------AEQGPEPAEDGGHLASEPEVQPSDRSPLEHSSPEKEAPSPEKTLP 1128
Query: 246 EADTGASGCHSHPEEQPTS 264
T A+ H E+ P+S
Sbjct: 1129 PQKTVAAESH---EKVPSS 1144
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 47.0 bits (110), Expect = 5e-05
Identities = 67/312 (21%), Positives = 119/312 (38%), Gaps = 41/312 (13%)
Query: 9 KLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLNETHCARCL 68
+LTDEE + + V+ R + E+ER+ L ++ E+ ++ + D + C C
Sbjct: 49 ELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRL--ENMRKNVAGDGVN----RCILCG 102
Query: 69 QPYQLLVNSKRQCLECGLFTCKSCG-----RVHPEEQGWICDPCHLARVVKIGSLEWYYE 123
+ +L ++ C +C C CG R+H W+C C R V S W+++
Sbjct: 103 EQLGMLGSACVVCEDCKKNVCTKCGVETNNRLH---SVWLCKICIEQREVWKRSGAWFFK 159
Query: 124 HVKAR-------FKRFGSAKVIRSLHGRLQGGAGPEL--------ISEERSGDSDQTDED 168
+ K+ + + Q P+ SE+R G +T D
Sbjct: 160 GFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPD 219
Query: 169 --GEPGSEAQAQAQPFGSKKKRLLSVHD---FDFEGDSDDSTQPQGHSLHLSSVPEARDS 223
PG S+ + S D +D G + DS++ +SV +R +
Sbjct: 220 PASAPGRGNYGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPA 279
Query: 224 PQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSH 283
P S+ + + P G + G P+++P ++PS G A PP
Sbjct: 280 PGSVQSPAPPQPGQPGTPGG---SRPGPGPAGRFPDQKP-EVAPSDPGTTA---PPREER 332
Query: 284 RMALGTAAALGS 295
+G A+G+
Sbjct: 333 TGGVGGYPAVGA 344
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 47.0 bits (110), Expect = 5e-05
Identities = 67/312 (21%), Positives = 119/312 (38%), Gaps = 41/312 (13%)
Query: 9 KLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLNETHCARCL 68
+LTDEE + + V+ R + E+ER+ L ++ E+ ++ + D + C C
Sbjct: 45 ELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRL--ENMRKNVAGDGVN----RCILCG 98
Query: 69 QPYQLLVNSKRQCLECGLFTCKSCG-----RVHPEEQGWICDPCHLARVVKIGSLEWYYE 123
+ +L ++ C +C C CG R+H W+C C R V S W+++
Sbjct: 99 EQLGMLGSACVVCEDCKKNVCTKCGVETNNRLH---SVWLCKICIEQREVWKRSGAWFFK 155
Query: 124 HVKAR-------FKRFGSAKVIRSLHGRLQGGAGPEL--------ISEERSGDSDQTDED 168
+ K+ + + Q P+ SE+R G +T D
Sbjct: 156 GFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPD 215
Query: 169 --GEPGSEAQAQAQPFGSKKKRLLSVHD---FDFEGDSDDSTQPQGHSLHLSSVPEARDS 223
PG S+ + S D +D G + DS++ +SV +R +
Sbjct: 216 PASAPGRGNYGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPA 275
Query: 224 PQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSH 283
P S+ + + P G + G P+++P ++PS G A PP
Sbjct: 276 PGSVQSPAPPQPGQPGTPGG---SRPGPGPAGRFPDQKP-EVAPSDPGTTA---PPREER 328
Query: 284 RMALGTAAALGS 295
+G A+G+
Sbjct: 329 TGGVGGYPAVGA 340
>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
Length = 935
Score = 45.1 bits (105), Expect = 2e-04
Identities = 120/597 (20%), Positives = 207/597 (34%), Gaps = 78/597 (13%)
Query: 5 LDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSD-------TA 57
+DLS LT+EE + +++V+QRD L+R EEER+ L KIK + + +
Sbjct: 2 IDLSFLTEEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQQLKNMSGQWFYEAKAKR 61
Query: 58 HLNETHCA-------RCLQPYQLLVNSKRQ---CLECGLFTCKSCGRVHPEEQGWICDPC 107
H ++ H A R +P SK + E + + PE G + +P
Sbjct: 62 HRDKIHGADIIRASMRKKRPQIAAEQSKDRENGAKESWVNNVNKDAFLPPELAGVVEEPE 121
Query: 108 HLARVVKIGS---------LEWYYEHV--------KARFKRFGSAKVIRSLHGRLQGGAG 150
A S ++ E+ K R F S+K+ G
Sbjct: 122 EDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKQRKNPFNSSKL---PEGHSSQQTK 178
Query: 151 PELISEERSGDSDQTDED-----GEPGSEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDST 205
E R+G + ED E + A Q K+ L + + G +
Sbjct: 179 NEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSKQTLPGLSN----GSQIKAP 234
Query: 206 QPQGHSLHLSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSI 265
P+ + S +D QS + A G+ + ++ +S S +
Sbjct: 235 IPKARKMIYKSTDLNKDDNQSFPRQRTDSLKARGAPRGILKRNSSSSSTDSETLRYNHNF 294
Query: 266 SPSRHGALAELCPPGGS-HRMALGTAAALGSNVIRNEQLPLQYLADVDTSDE-------- 316
P +++ PG + H +L N N PL+++ DE
Sbjct: 295 EPK-----SKIVSPGLTIHERISEKEHSLEDNSSPNSLEPLKHVRFSAVKDELPQSPGLI 349
Query: 317 ---ESIRAHVMASHHSKRRGRASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAG 373
E V+ S K + +++ F+ + S + ++T P ++K
Sbjct: 350 HGREVGEFSVLESDRLKNGMEDAGDTEEFQSDPKPSQYRKPSLFHQSTSSPYVSKSETHQ 409
Query: 374 VRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQAD----- 428
T L E LT+ E S E KD+ +E R +SV P AD
Sbjct: 410 PMTSGSFPINGLHSHSEVLTARPQSMENSPTINEPKDKSSELTRLESVLPRSPADELSHC 469
Query: 429 ----PEVGTAAHQTNRQEKSPQDPGDPVQ-YNRTTDEEL--SELEDRVAVTASEVQQAES 481
P +RQ+ S ++P ++ R+ ++ LED +++ QA+
Sbjct: 470 VEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMPSKSLED---ISSDSSNQAKV 526
Query: 482 EVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEA 538
+ E +A + + +P L V L +D D +SE+
Sbjct: 527 DNQPEELVRSAEDVSTVPTQPDNPFSHPDKLKRMSKSVPAFLQDESDDRETDTASES 583
>gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]
Length = 910
Score = 44.3 bits (103), Expect = 3e-04
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 5 LDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKREL 52
+DLS LT+EE + +++V+QRD L+R EEER+ L KIK + + +
Sbjct: 2 IDLSFLTEEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQQLKNM 49
>gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]
Length = 934
Score = 44.3 bits (103), Expect = 3e-04
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 5 LDLSKLTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKREL 52
+DLS LT+EE + +++V+QRD L+R EEER+ L KIK + + +
Sbjct: 2 IDLSFLTEEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQQLKNM 49
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 41.6 bits (96), Expect = 0.002
Identities = 54/227 (23%), Positives = 76/227 (33%), Gaps = 23/227 (10%)
Query: 133 GSAKVIRSLHGRLQGGAGPELISEERSGDSDQTDEDGEPGSEAQAQAQPFGSKKKRLLSV 192
GS R Q G G S Q D S A P S+ +
Sbjct: 3481 GSRSASRQTRNDEQSGDGSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVS 3540
Query: 193 HDFDFEGDSDDSTQPQGHSL--HLSSVPE-ARDSPQSLTDESCSEKAAPHKAE-----GL 244
D D +G S+DS + G + H S E +RD + T H AE G
Sbjct: 3541 QDSDSQGHSEDSERWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSGT 3600
Query: 245 EEADTGASGCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRNE--- 301
A+ + G + EQ S + RHG+ + H G S+ +R+
Sbjct: 3601 HHAENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHS---GIGHGQASSAVRDSGHR 3657
Query: 302 ----QLPLQYLADVDTSDEESIRAHVMA-----SHHSKRRGRASSES 339
+ SD +S+ AH A SH RGR++ S
Sbjct: 3658 GSSGSQASDSEGHSEDSDTQSVSAHGQAGPHQQSHQESTRGRSAGRS 3704
Score = 40.4 bits (93), Expect = 0.005
Identities = 49/205 (23%), Positives = 77/205 (37%), Gaps = 33/205 (16%)
Query: 155 SEERSGDSDQTDEDGEPGSEAQAQAQ--------------PFGSKKKRLLSVHDFDFEGD 200
+EE+SGD T G EA +QA P S+ + D D +G
Sbjct: 573 NEEQSGDG--TRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGH 630
Query: 201 SDDSTQPQG---HSLHLSSVPEARDS---PQSLTDESC--SEKAAPHKAEGLEEADTGAS 252
S+DS + G + H S+ ++RD P+S ++ A + G +S
Sbjct: 631 SEDSERWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSS 690
Query: 253 GCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRNE-------QLPL 305
G + EQ S + RHG+ +L S GT S+ +R+
Sbjct: 691 GQAASSHEQARSSAGERHGSRHQLQSADSSRHS--GTGHGQASSAVRDSGHRGSSGSQAT 748
Query: 306 QYLADVDTSDEESIRAHVMASHHSK 330
+ SD +S+ H A HH +
Sbjct: 749 DSEGHSEDSDTQSVSGHGQAGHHQQ 773
Score = 39.7 bits (91), Expect = 0.008
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 27/222 (12%)
Query: 152 ELISEERSGDSDQTDEDGEPGSE--AQAQAQPFGSKKKRLLSV-HDFDFEGDSDDSTQPQ 208
++ RS D + + E +Q Q ++K+R V D D EG S+DS +
Sbjct: 255 KIYERSRSSDGKSSSQVNRSRHENTSQVPLQESRTRKRRGSRVSQDRDSEGHSEDSERHS 314
Query: 209 GHSL---HLSSVPEARDS---PQSLTDESCSE--KAAPHKAEGLEEADTGASGCHSHPEE 260
G + H S+ ++RD P+S ++ S A + G A+T + G + E
Sbjct: 315 GSASRNHHGSAWEQSRDGSRHPRSHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHE 374
Query: 261 QPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLAD-----VDTSD 315
Q S RHG+ + H A G A + R + A + SD
Sbjct: 375 QARSSPGERHGSGHQQSADSSRH-SATGRGQASSAVSDRGHRGSSGSQASDSEGHSENSD 433
Query: 316 EESIRAHVMA-----SHHSKRRGRAS-----SESQIFELNKH 347
+S+ H A SH RGR+ S S +++++ H
Sbjct: 434 TQSVSGHGKAGLRQQSHQESTRGRSGERSGRSGSSLYQVSTH 475
Score = 38.9 bits (89), Expect = 0.014
Identities = 56/228 (24%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 147 GGAGPELIS-----EERSGDSDQTD--EDGEPGSEAQA-------QAQPFGSKKKRLLSV 192
G +GP S EE+SGD + EP + A + Q + GSK R
Sbjct: 1533 GQSGPRSASRQTRNEEQSGDGSRHSGSRHHEPSTRAGSSRHSQVGQGESAGSKTSRRQGS 1592
Query: 193 ---HDFDFEGDSDDSTQPQGHSLHLSSVPEARD-------SPQSLTDESCSE--KAAPHK 240
D D EG S+DS + + S + AR+ +P+S ++ S A +
Sbjct: 1593 SVSQDRDSEGHSEDSER-RSESASRNHYGSAREQSRHGSRNPRSHQEDRASHGHSAESSR 1651
Query: 241 AEGLEEADTGASGCHSHPEEQPTSISPSRHGA----LAELCPPGGSHRMALGTAAALGSN 296
G A+T + G + +EQ S RHG+ A+ G+ R + N
Sbjct: 1652 QSGTRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSSTDSGTGRRQDSSVVGDSGN 1711
Query: 297 VIRNEQLPLQYLADVDTSDEESIRAHVMA-----SHHSKRRGRASSES 339
+ + SD +S+ AH A SH RG++ S
Sbjct: 1712 RGSSGSQASDSEGHSEESDTQSVSAHGQAGPHQQSHQESTRGQSGERS 1759
Score = 37.0 bits (84), Expect = 0.052
Identities = 56/219 (25%), Positives = 80/219 (36%), Gaps = 39/219 (17%)
Query: 155 SEERSGDSDQ----------TDEDGEPGSEAQAQAQPFGSKKKRLLSV---HDFDFEGDS 201
+EE+SGDS + T D S+A Q Q GS++ R D D EG S
Sbjct: 3167 NEEQSGDSSRHSVSRHHEASTHADISRHSQA-VQGQSEGSRRSRRQGSSVSQDSDSEGHS 3225
Query: 202 DDSTQPQGHSL--HLSSVPEARDSPQSLTDESCSEKAAPH-------KAEGLEEADTGAS 252
+DS + G + H SV E + S S E A H + G A+T +
Sbjct: 3226 EDSERWSGSASRNHRGSVQE-QSRHGSRHPRSHHEDRAGHGHSADRSRQSGTRHAETSSG 3284
Query: 253 GCHSHPEEQPTSISPSRHGALAELCPPGGSHRMALGTAAALGSNVIRNEQ-------LPL 305
G + EQ S RHG+ + H G S+ +R+ +
Sbjct: 3285 GQAASSHEQARSSPGERHGSRHQQSADSSRHS---GIPRGQASSAVRDSRHWGSSGSQAS 3341
Query: 306 QYLADVDTSDEESIRAHVMA-----SHHSKRRGRASSES 339
+ SD +S+ H A SH R R+ S
Sbjct: 3342 DSEGHSEESDTQSVSGHGQAGPHQQSHQESARDRSGGRS 3380
>gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
Length = 519
Score = 41.2 bits (95), Expect = 0.003
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 380 VEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVGTAAHQTN 439
V EE R EEL + + +E++ K ++ + + + +P+ T + +
Sbjct: 151 VTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKASTTS---D 207
Query: 440 RQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAESEVSDIESRIAALRAAGLT 499
E P PG+PVQ + E ED + ++++ V A +V D ++A R GL
Sbjct: 208 GDESPPSSPGNPVQ------GQCGEEEDSLDLSSTFVSLALRKVGDWP--LSARREKGLN 259
Query: 500 VKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNAD--PSSEAKAMAVPYLLRRKFSNSLKS 557
+P G+ K+G+ E P + P K A P LL S +
Sbjct: 260 QEPQGR-----------GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQS-QE 307
Query: 558 QGKDDDSFDRKSVY 571
K SF + Y
Sbjct: 308 LAKLGTSFAQNGFY 321
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 41.2 bits (95), Expect = 0.003
Identities = 43/199 (21%), Positives = 71/199 (35%), Gaps = 7/199 (3%)
Query: 375 RTEADVEEEALRRKLEELTSNVS----DQETSSEEEEAKDEKAEPNRDKSVGPLPQADPE 430
+ EA EA + EE S ++ S +EEAK + +K+ P+ +
Sbjct: 555 KEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKS 614
Query: 431 VGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAESEVSDIESRI 490
A + KSP + P + T EE E + E + E S +++
Sbjct: 615 PAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEA 674
Query: 491 AALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKAMAVPYLLRRK 550
+ A VK K K+ P+ + + K P A +AK+ P K
Sbjct: 675 KSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKS---PVKEEAK 731
Query: 551 FSNSLKSQGKDDDSFDRKS 569
KS K++ K+
Sbjct: 732 TPEKAKSPVKEEAKSPEKA 750
Score = 35.8 bits (81), Expect = 0.12
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 14/174 (8%)
Query: 373 GVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVG 432
G E EEEA EE T + +E +S E+EAK P ++++ P PE
Sbjct: 483 GKEEEGGEEEEA--EGGEEETKSPPAEEAASPEKEAK----SPVKEEAKSPAEAKSPEKE 536
Query: 433 TAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAE------SEVSDI 486
A ++ + KSP+ P + + E E A + +EV+ E E +
Sbjct: 537 EA--KSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKS 594
Query: 487 ESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKA 540
+ + A VK K ++ P+ + K PE + EAK+
Sbjct: 595 PAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKS 648
Score = 33.9 bits (76), Expect = 0.44
Identities = 42/193 (21%), Positives = 63/193 (32%), Gaps = 12/193 (6%)
Query: 374 VRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVGT 433
V+ EA EA EE S + + K+E P + KS PE
Sbjct: 608 VKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPE--K 665
Query: 434 AAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAESEVSDIESRIAAL 493
A + KSP+ PV+ E E + E + E S ++ +
Sbjct: 666 AKSPVKAEAKSPEKAKSPVK------AEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSP 719
Query: 494 RAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNA----DPSSEAKAMAVPYLLRR 549
A VK K K+ P+ + + K PE P ++ A
Sbjct: 720 EKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPAD 779
Query: 550 KFSNSLKSQGKDD 562
KF KS K++
Sbjct: 780 KFPEKAKSPVKEE 792
Score = 32.0 bits (71), Expect = 1.7
Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 21/212 (9%)
Query: 374 VRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGP---------- 423
V+ EA E+A EE S + EE + ++ P ++++ P
Sbjct: 698 VKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAK 757
Query: 424 -LPQADPEVGTAAHQTNRQ--EKSPQDPGDPVQYN-RTTDEELSELEDRVAVTASEVQQA 479
L PE T A + R +K P+ PV+ ++ ++ S L++ E+ +
Sbjct: 758 TLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKK 817
Query: 480 ESEVSDIESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNAD-PSSEA 538
E S ++ + + VK K + P K K+ E P + P +
Sbjct: 818 EEVKSPVKEE---EKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKV 874
Query: 539 KAMAVPYLLRRKFSNSLKSQGKDDDSFDRKSV 570
+ P + + K S K + K +++ D+K V
Sbjct: 875 EEKKEPAVEKPKES---KVEAKKEEAEDKKKV 903
Score = 30.8 bits (68), Expect = 3.7
Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 20/173 (11%)
Query: 375 RTEADVEEEALRRKLEE----LTSNVSDQETSSEEEEAKDEKAEPNRDK----SVGPLPQ 426
+ E ++EA + K+EE + + +++EEA+D+K P +K V
Sbjct: 860 KKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKED 919
Query: 427 ADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEELSELEDRVAVTASEVQQAESEVSDI 486
A P+ T + + ++P P + E+ E++ A E + E++ +
Sbjct: 920 AKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEK-AKKPEEKPKTEAKAKED 978
Query: 487 ESRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAK 539
+ ++ + KP + KS+ K K PE D +++ K
Sbjct: 979 DKTLSKEPS-----KPKAEKAEKSS------STDQKDSKPPEKATEDKAAKGK 1020
Score = 29.6 bits (65), Expect = 8.3
Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 22/175 (12%)
Query: 389 LEELT--SNVSDQETSSEEEEAK-----------DEKAEPNRDKSVGPLPQ--ADPEVGT 433
+EE T + V+++ T EE+EAK +E+AE +++ P + A PE
Sbjct: 457 VEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPE-KE 515
Query: 434 AAHQTNRQEKSPQDPGDPVQYNRTTDEELSELE------DRVAVTASEVQQAESEVSDIE 487
A + KSP + P + + E+ E A + E + E E +
Sbjct: 516 AKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSP 575
Query: 488 SRIAALRAAGLTVKPSGKPRRKSNLPIFLPRVAGKLGKRPEDPNADPSSEAKAMA 542
+ + + A K K ++ P + K P + + EAK+ A
Sbjct: 576 AEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPA 630
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 40.8 bits (94), Expect = 0.004
Identities = 72/325 (22%), Positives = 123/325 (37%), Gaps = 41/325 (12%)
Query: 155 SEERSGDSDQT-DEDGEPGSEAQAQAQ---PFGS-KKKRLLSVHDFDFEGDSDDSTQPQG 209
+ E S +S++T D+D P +A +A P G KKK+ S D D + DS D +P+
Sbjct: 189 NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS-DGAKPEP 247
Query: 210 HSLHLSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSR 269
++ S+ + S S +D S K P + E+ G PE P+S S
Sbjct: 248 VAMARSA--SSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDS 305
Query: 270 HGALAELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHVMASHHS 329
E+ R L + R ++ L+ L + + ++E R A
Sbjct: 306 DS--DEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKE--RRRERADRGE 361
Query: 330 KRRGRASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVRTEADVEEEALRRKL 389
RG S EL + + V KG G G + +D E EA +L
Sbjct: 362 AERGSGGSSGD--ELRED-----------DEPVKKRGRKGRGRGPPSSSDSEPEA---EL 405
Query: 390 EELTSNVSDQETSSEEEEA-----KDEKAEPNRDKSVGPLPQADPEVGTAAHQTNRQEKS 444
E + + SS E A K+++ P + P+ + +R+ +
Sbjct: 406 EREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEK 465
Query: 445 PQDPGDPVQYNRTTDEELSELEDRV 469
++P + +E+L +L +
Sbjct: 466 KKEP--------SVEEKLQKLHSEI 482
Score = 30.4 bits (67), Expect = 4.9
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 371 GAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGP 423
G + E +E+A + +L++ V+ + TS + E A+D++ E RD GP
Sbjct: 577 GEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGP 629
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 40.8 bits (94), Expect = 0.004
Identities = 72/325 (22%), Positives = 123/325 (37%), Gaps = 41/325 (12%)
Query: 155 SEERSGDSDQT-DEDGEPGSEAQAQAQ---PFGS-KKKRLLSVHDFDFEGDSDDSTQPQG 209
+ E S +S++T D+D P +A +A P G KKK+ S D D + DS D +P+
Sbjct: 189 NSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADS-DGAKPEP 247
Query: 210 HSLHLSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSR 269
++ S+ + S S +D S K P + E+ G PE P+S S
Sbjct: 248 VAMARSA--SSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSDS 305
Query: 270 HGALAELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHVMASHHS 329
E+ R L + R ++ L+ L + + ++E R A
Sbjct: 306 DS--DEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKE--RRRERADRGE 361
Query: 330 KRRGRASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVRTEADVEEEALRRKL 389
RG S EL + + V KG G G + +D E EA +L
Sbjct: 362 AERGSGGSSGD--ELRED-----------DEPVKKRGRKGRGRGPPSSSDSEPEA---EL 405
Query: 390 EELTSNVSDQETSSEEEEA-----KDEKAEPNRDKSVGPLPQADPEVGTAAHQTNRQEKS 444
E + + SS E A K+++ P + P+ + +R+ +
Sbjct: 406 EREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEK 465
Query: 445 PQDPGDPVQYNRTTDEELSELEDRV 469
++P + +E+L +L +
Sbjct: 466 KKEP--------SVEEKLQKLHSEI 482
Score = 30.4 bits (67), Expect = 4.9
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 371 GAGVRTEADVEEEALRRKLEELTSNVSDQETSSEEEEAKDEKAEPNRDKSVGP 423
G + E +E+A + +L++ V+ + TS + E A+D++ E RD GP
Sbjct: 577 GEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGP 629
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 40.0 bits (92), Expect = 0.006
Identities = 96/387 (24%), Positives = 139/387 (35%), Gaps = 88/387 (22%)
Query: 156 EERSGDSDQTDEDGEPGSEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLS 215
E+ SGD D+D PG + + + RL S + DSDD+ Q S
Sbjct: 106 EDDSGDDTFGDDDSGPGPKDRQEGG-----NSRLGS------DEDSDDTIQASEES---- 150
Query: 216 SVPEARDSPQSLTDESC---SEKAAPHKAEGLEEADTGASGCHSHPEEQPT---SISPSR 269
P+ +DS Q T ES +E K EG G S S EE S S
Sbjct: 151 -APQGQDSAQDTTSESRELDNEDRVDSKPEG------GDSTQESESEEHWVGGGSDGESS 203
Query: 270 HGALAELCPPG------GSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHV 323
HG +EL G S R G + + + E A+ S + H
Sbjct: 204 HGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENSEQANTQDSGGSQLLEH- 262
Query: 324 MASHHSKRRGRASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVR-TEADVEE 382
S R+ R S E EL+ + + E EN+ GL R ++ D +E
Sbjct: 263 -PSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENS--NSRDTGLSQPRRDSKGDSQE 319
Query: 383 EALRRKLEELTSNV-------------SDQETSSE-EEEAKDEKAEPNRD---------- 418
++ +E + NV S QE SSE +EE E N D
Sbjct: 320 DSKENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQE 379
Query: 419 ----------------KSVGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEEL 462
KS QAD E ++ N E+SP+ P D N ++ E
Sbjct: 380 DSDSSEEDSSHTLSHSKSESREEQADSE---SSESLNFSEESPESPEDE---NSSSQE-- 431
Query: 463 SELEDRVAVTASEVQQAESEVSDIESR 489
L+ + S+ +++ SE D +S+
Sbjct: 432 -GLQSHSSSAESQSEESHSEEDDSDSQ 457
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 40.0 bits (92), Expect = 0.006
Identities = 96/387 (24%), Positives = 139/387 (35%), Gaps = 88/387 (22%)
Query: 156 EERSGDSDQTDEDGEPGSEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLS 215
E+ SGD D+D PG + + + RL S + DSDD+ Q S
Sbjct: 90 EDDSGDDTFGDDDSGPGPKDRQEGG-----NSRLGS------DEDSDDTIQASEES---- 134
Query: 216 SVPEARDSPQSLTDESC---SEKAAPHKAEGLEEADTGASGCHSHPEEQPT---SISPSR 269
P+ +DS Q T ES +E K EG G S S EE S S
Sbjct: 135 -APQGQDSAQDTTSESRELDNEDRVDSKPEG------GDSTQESESEEHWVGGGSDGESS 187
Query: 270 HGALAELCPPG------GSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHV 323
HG +EL G S R G + + + E A+ S + H
Sbjct: 188 HGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENSEQANTQDSGGSQLLEH- 246
Query: 324 MASHHSKRRGRASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVR-TEADVEE 382
S R+ R S E EL+ + + E EN+ GL R ++ D +E
Sbjct: 247 -PSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENS--NSRDTGLSQPRRDSKGDSQE 303
Query: 383 EALRRKLEELTSNV-------------SDQETSSE-EEEAKDEKAEPNRD---------- 418
++ +E + NV S QE SSE +EE E N D
Sbjct: 304 DSKENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQE 363
Query: 419 ----------------KSVGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQYNRTTDEEL 462
KS QAD E ++ N E+SP+ P D N ++ E
Sbjct: 364 DSDSSEEDSSHTLSHSKSESREEQADSE---SSESLNFSEESPESPEDE---NSSSQE-- 415
Query: 463 SELEDRVAVTASEVQQAESEVSDIESR 489
L+ + S+ +++ SE D +S+
Sbjct: 416 -GLQSHSSSAESQSEESHSEEDDSDSQ 441
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/353 (22%), Positives = 132/353 (37%), Gaps = 52/353 (14%)
Query: 155 SEERSGDSDQTDEDGEPG-SEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLH 213
SE+ S SD+TD +G+P AQ +A +K+ + D + Q +G +L
Sbjct: 200 SEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGK-VGDVTPQVKGGAL- 257
Query: 214 LSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGAL 273
P A+ + + + SE EG E + +G S + + A
Sbjct: 258 ----PPAKRAKKPEEESESSE-------EGSESEEEAPAGTRSQVKASEKILQVRAASAP 306
Query: 274 AELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHVMASHHSKRRG 333
A+ P G+ G A A+ S + + ++SD E A +K G
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASG 366
Query: 334 RASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVRTEADVEEEALRRKLEELT 393
+ S ++ + + P K A + +A EE
Sbjct: 367 KTSQVG--------AASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREE---------- 408
Query: 394 SNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQ 453
D ++SSEE ++++E P + K G PQ A ++ R+ +P P
Sbjct: 409 ----DSQSSSEESDSEEE--APAQAKPSGKAPQV-RAASAPAKESPRKGAAPAPP----- 456
Query: 454 YNRTTDEELSELEDRVAVTASEVQQAESEVSDIE-SRIAALRAAGLTVKPSGK 505
R T ++++ E ++ SE SD + +AA+ AA VKP GK
Sbjct: 457 --RKTGPAAAQVQ---VGKQEEDSRSSSEESDSDREALAAMNAA--QVKPLGK 502
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/353 (22%), Positives = 132/353 (37%), Gaps = 52/353 (14%)
Query: 155 SEERSGDSDQTDEDGEPG-SEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLH 213
SE+ S SD+TD +G+P AQ +A +K+ + D + Q +G +L
Sbjct: 200 SEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGK-VGDVTPQVKGGAL- 257
Query: 214 LSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGAL 273
P A+ + + + SE EG E + +G S + + A
Sbjct: 258 ----PPAKRAKKPEEESESSE-------EGSESEEEAPAGTRSQVKASEKILQVRAASAP 306
Query: 274 AELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHVMASHHSKRRG 333
A+ P G+ G A A+ S + + ++SD E A +K G
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASG 366
Query: 334 RASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVRTEADVEEEALRRKLEELT 393
+ S ++ + + P K A + +A EE
Sbjct: 367 KTSQVG--------AASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREE---------- 408
Query: 394 SNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQ 453
D ++SSEE ++++E P + K G PQ A ++ R+ +P P
Sbjct: 409 ----DSQSSSEESDSEEE--APAQAKPSGKAPQV-RAASAPAKESPRKGAAPAPP----- 456
Query: 454 YNRTTDEELSELEDRVAVTASEVQQAESEVSDIE-SRIAALRAAGLTVKPSGK 505
R T ++++ E ++ SE SD + +AA+ AA VKP GK
Sbjct: 457 --RKTGPAAAQVQ---VGKQEEDSRSSSEESDSDREALAAMNAA--QVKPLGK 502
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/353 (22%), Positives = 132/353 (37%), Gaps = 52/353 (14%)
Query: 155 SEERSGDSDQTDEDGEPG-SEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLH 213
SE+ S SD+TD +G+P AQ +A +K+ + D + Q +G +L
Sbjct: 200 SEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGK-VGDVTPQVKGGAL- 257
Query: 214 LSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGAL 273
P A+ + + + SE EG E + +G S + + A
Sbjct: 258 ----PPAKRAKKPEEESESSE-------EGSESEEEAPAGTRSQVKASEKILQVRAASAP 306
Query: 274 AELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHVMASHHSKRRG 333
A+ P G+ G A A+ S + + ++SD E A +K G
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASG 366
Query: 334 RASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVRTEADVEEEALRRKLEELT 393
+ S ++ + + P K A + +A EE
Sbjct: 367 KTSQVG--------AASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREE---------- 408
Query: 394 SNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQ 453
D ++SSEE ++++E P + K G PQ A ++ R+ +P P
Sbjct: 409 ----DSQSSSEESDSEEE--APAQAKPSGKAPQV-RAASAPAKESPRKGAAPAPP----- 456
Query: 454 YNRTTDEELSELEDRVAVTASEVQQAESEVSDIE-SRIAALRAAGLTVKPSGK 505
R T ++++ E ++ SE SD + +AA+ AA VKP GK
Sbjct: 457 --RKTGPAAAQVQ---VGKQEEDSRSSSEESDSDREALAAMNAA--QVKPLGK 502
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/353 (22%), Positives = 132/353 (37%), Gaps = 52/353 (14%)
Query: 155 SEERSGDSDQTDEDGEPG-SEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLH 213
SE+ S SD+TD +G+P AQ +A +K+ + D + Q +G +L
Sbjct: 200 SEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGK-VGDVTPQVKGGAL- 257
Query: 214 LSSVPEARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGAL 273
P A+ + + + SE EG E + +G S + + A
Sbjct: 258 ----PPAKRAKKPEEESESSE-------EGSESEEEAPAGTRSQVKASEKILQVRAASAP 306
Query: 274 AELCPPGGSHRMALGTAAALGSNVIRNEQLPLQYLADVDTSDEESIRAHVMASHHSKRRG 333
A+ P G+ G A A+ S + + ++SD E A +K G
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASG 366
Query: 334 RASSESQIFELNKHISAVECLLTYLENTVVPPLAKGLGAGVRTEADVEEEALRRKLEELT 393
+ S ++ + + P K A + +A EE
Sbjct: 367 KTSQVG--------AASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREE---------- 408
Query: 394 SNVSDQETSSEEEEAKDEKAEPNRDKSVGPLPQADPEVGTAAHQTNRQEKSPQDPGDPVQ 453
D ++SSEE ++++E P + K G PQ A ++ R+ +P P
Sbjct: 409 ----DSQSSSEESDSEEE--APAQAKPSGKAPQV-RAASAPAKESPRKGAAPAPP----- 456
Query: 454 YNRTTDEELSELEDRVAVTASEVQQAESEVSDIE-SRIAALRAAGLTVKPSGK 505
R T ++++ E ++ SE SD + +AA+ AA VKP GK
Sbjct: 457 --RKTGPAAAQVQ---VGKQEEDSRSSSEESDSDREALAAMNAA--QVKPLGK 502
>gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
Length = 496
Score = 39.7 bits (91), Expect = 0.008
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 39 LKGKIKKESSKRELLSDTAHLNETHCARCLQPYQLLVNSKR----QCLECGLFTCKSCGR 94
LKGK + K E L + + CL LV+ + QC+EC TC CG+
Sbjct: 382 LKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECK--TCIICGQ 439
Query: 95 VHPEEQGWICDPC 107
H EE+ CD C
Sbjct: 440 PHHEEEMMFCDMC 452
>gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]
Length = 498
Score = 39.7 bits (91), Expect = 0.008
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 39 LKGKIKKESSKRELLSDTAHLNETHCARCLQPYQLLVNSKR----QCLECGLFTCKSCGR 94
LKGK + K E L + + CL LV+ + QC+EC TC CG+
Sbjct: 384 LKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECK--TCIICGQ 441
Query: 95 VHPEEQGWICDPC 107
H EE+ CD C
Sbjct: 442 PHHEEEMMFCDMC 454
>gi|5902064 rabphilin 3A-like (without C2 domains) [Homo sapiens]
Length = 315
Score = 39.7 bits (91), Expect = 0.008
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 10 LTDEEAQHVLEVVQRDFDLRRKEEERLEALKGKIKKESSKRELLSDTAHLNETHCARCLQ 69
L+ E + +L+V+QR L E++R+ L ++ E+ +R ++ + + C C +
Sbjct: 47 LSPAEVEAILQVIQRAERLDVLEQQRIGRLVERL--ETMRRNVMGNGL----SQCLLCGE 100
Query: 70 PYQLLVNSKRQCLECGLFTCKSCG-RVHPEEQG--WICDPCHLARVVKIGSLEWYYE 123
L +S C +C C CG P ++ W+C C R V S W+Y+
Sbjct: 101 VLGFLGSSSVFCKDCRKKVCTKCGIEASPGQKRPLWLCKICSEQREVWKRSGAWFYK 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,900,486
Number of Sequences: 37866
Number of extensions: 1267597
Number of successful extensions: 8961
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 7592
Number of HSP's gapped (non-prelim): 1605
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.