Guide to the Human Genome
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Name: SYTL5 Sequence: fasta or formatted (752aa) NCBI GI: 254039648
Description:

synaptotagmin-like 5 isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [730aa] synaptotagmin-like 5 isoform 1
alt prot [730aa] synaptotagmin-like 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         28           2
 C cysteine            1.6         12           1
 D aspartate           5.7         43           2
 E glutamate           7.0         53           2
 F phenylalanine       3.6         27           2
 G glycine             7.4         56           2
 H histidine           1.9         14           1
 I isoleucine          4.3         32           2
 K lysine              8.1         61           3
 L leucine             8.6         65           2
 M methionine          1.5         11           2
 N asparagine          4.5         34           2
 P proline             4.4         33           2
 Q glutamine           3.9         29           2
 R arginine            6.1         46           2
 S serine             11.6         87           2
 T threonine           6.9         52           2
 V valine              5.7         43           2
 W tryptophan          1.3         10           1
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synaptotagmin-like 5 isoform 2 
SYTL5                 0.961   synaptotagmin-like 5 isoform 1 
SYTL5                 0.961   synaptotagmin-like 5 isoform 1 
SYTL4                 0.312   synaptotagmin-like 4 
SYTL4                 0.312   synaptotagmin-like 4 
SYTL2                 0.165   synaptotagmin-like 2 isoform i 
SYTL2                 0.165   synaptotagmin-like 2 isoform g 
SYTL2                 0.157   synaptotagmin-like 2 isoform d 
SYTL2                 0.157   synaptotagmin-like 2 isoform c 
SYTL2                 0.156   synaptotagmin-like 2 isoform b 
SYTL2                 0.156   synaptotagmin-like 2 isoform e 
SYTL2                 0.155   synaptotagmin-like 2 isoform a 
SYTL2                 0.153   synaptotagmin-like 2 isoform f 
SYTL2                 0.152   synaptotagmin-like 2 isoform h 
SYTL1                 0.139   synaptotagmin-like 1 
SYTL3                 0.131   synaptotagmin-like 3 
SYT5                  0.070   synaptotagmin V 
SYT2                  0.067   synaptotagmin II 
SYT2                  0.067   synaptotagmin II 
DOC2B                 0.062   double C2-like domains, beta 
SYT1                  0.061   synaptotagmin I 
SYT1                  0.061   synaptotagmin I 
SYT1                  0.061   synaptotagmin I 
SYT7                  0.059   synaptotagmin VII 
DOC2A                 0.056   double C2-like domains, alpha 
SYT3                  0.056   synaptotagmin III 
SYT3                  0.056   synaptotagmin III 
SYT3                  0.056   synaptotagmin III 
RPH3A                 0.054   rabphilin 3A homolog isoform 1 
RPH3A                 0.054   rabphilin 3A homolog isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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