Guide to the Human Genome
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Search of human proteins with 13129094

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13129094 ashwin [Homo sapiens]
         (232 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13129094 ashwin [Homo sapiens]                                     467   e-132
gi|169164505 PREDICTED: similar to LLP homolog [Homo sapiens]          36   0.025
gi|88959164 PREDICTED: similar to LLP homolog [Homo sapiens]           36   0.025
gi|88953955 PREDICTED: similar to LLP homolog [Homo sapiens]           36   0.025
gi|103472031 family with sequence similarity 62 (C2 domain conta...    35   0.055
gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]           35   0.055
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot...    34   0.12 
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot...    34   0.12 
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot...    34   0.12 
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot...    34   0.12 
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot...    34   0.12 
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote...    34   0.12 
gi|14150124 LLP homolog [Homo sapiens]                                 34   0.12 
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi...    34   0.12 
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap...    34   0.12 
gi|27734775 hypothetical protein LOC286499 [Homo sapiens]              33   0.16 
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ...    32   0.35 
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    32   0.35 
gi|21735575 junctophilin 1 [Homo sapiens]                              32   0.35 
gi|108860697 zinc finger protein 592 [Homo sapiens]                    32   0.35 
gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens]            32   0.35 
gi|149588928 SLAIN motif family, member 2 [Homo sapiens]               32   0.35 
gi|239752435 PREDICTED: similar to melanoma antigen family C, 2 ...    32   0.46 
gi|239746952 PREDICTED: similar to melanoma antigen family C, 2 ...    32   0.46 
gi|116734706 interferon regulatory factor 2 binding protein 2 is...    32   0.46 
gi|116734704 interferon regulatory factor 2 binding protein 2 is...    32   0.46 
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]         32   0.60 
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]          32   0.60 
gi|55741677 SET domain containing 1A [Homo sapiens]                    32   0.60 
gi|150170670 piccolo isoform 2 [Homo sapiens]                          32   0.60 

>gi|13129094 ashwin [Homo sapiens]
          Length = 232

 Score =  467 bits (1201), Expect = e-132
 Identities = 232/232 (100%), Positives = 232/232 (100%)

Query: 1   MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPL 60
           MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPL
Sbjct: 1   MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPL 60

Query: 61  PQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTEN 120
           PQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTEN
Sbjct: 61  PQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTEN 120

Query: 121 GDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHR 180
           GDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHR
Sbjct: 121 GDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHR 180

Query: 181 KSPSGPVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKPPQAKRKIQHVTWP 232
           KSPSGPVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKPPQAKRKIQHVTWP
Sbjct: 181 KSPSGPVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKPPQAKRKIQHVTWP 232


>gi|169164505 PREDICTED: similar to LLP homolog [Homo sapiens]
          Length = 129

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 32  EQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSS 91
           E+ ++ +ETD++ NK +L D + Q+ I + QR        K ++ KRE+ + KN+ K   
Sbjct: 69  EKDDMKMETDIKRNKKTLLDQHGQYPIWMNQRQ------RKRLKAKREKRKEKNKAKAVK 122

Query: 92  TVDGL 96
              GL
Sbjct: 123 VAKGL 127


>gi|88959164 PREDICTED: similar to LLP homolog [Homo sapiens]
          Length = 129

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 32  EQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSS 91
           E+ ++ +ETD++ NK +L D + Q+ I + QR        K ++ KRE+ + KN+ K   
Sbjct: 69  EKDDMKMETDIKRNKKTLLDQHGQYPIWMNQRQ------RKRLKAKREKRKEKNKAKAVK 122

Query: 92  TVDGL 96
              GL
Sbjct: 123 VAKGL 127


>gi|88953955 PREDICTED: similar to LLP homolog [Homo sapiens]
          Length = 129

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 32  EQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSS 91
           E+ ++ +ETD++ NK +L D + Q+ I + QR        K ++ KRE+ + KN+ K   
Sbjct: 69  EKDDMKMETDIKRNKKTLLDQHGQYPIWMNQRQ------RKRLKAKREKRKEKNKAKAVK 122

Query: 92  TVDGL 96
              GL
Sbjct: 123 VAKGL 127


>gi|103472031 family with sequence similarity 62 (C2 domain
           containing), member C [Homo sapiens]
          Length = 886

 Score = 35.0 bits (79), Expect = 0.055
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 21/131 (16%)

Query: 94  DGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLI 153
           + L+K PL++    +T+   K +  E G  D   PP  AS T +  R  + ++S+ +   
Sbjct: 597 EALKKGPLLI-KKVATNQGPKAQPQEEGPTDLPCPPDPASDTKDVSRSTTTTTSATTVAT 655

Query: 154 LSSNLPVNNKTEHNNNDAKQNHDLTHRKSPS------------GPVKSP-----PLSPVG 196
             ++     + +  ++  +    +  +KSP+            GP+KSP     P SP  
Sbjct: 656 EPTSQETGPEPKGKDSAKRFCEPIGEKKSPATIFLTVPGPHSPGPIKSPRPMKCPASPFA 715

Query: 197 TTPVKLKRAAP 207
             P   KR AP
Sbjct: 716 WPP---KRLAP 723


>gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]
          Length = 490

 Score = 35.0 bits (79), Expect = 0.055
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 27/178 (15%)

Query: 62  QRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENG 121
           +++  + R  +  EK++E+ + + + +++++V  L K  +    G +T    + KK +  
Sbjct: 284 KKEARRKRRERNFEKQKERKKKRQQARKTASV--LSKDDVAPESGDTTVKKPESKKEQTP 341

Query: 122 DNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRK 181
           ++ + K          A  K +N S    P ++    P+  KT  N     Q H  T +K
Sbjct: 342 EHGKKKRG-----RGKAQVKATNESEDEIPQLV----PIGKKTPANEKVEIQKH-ATGKK 391

Query: 182 SPSG---------------PVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKPPQAKR 224
           SP+                P    P +    TP K     PK + EA+    P   K+
Sbjct: 392 SPAKSPNPSTPRGKKRKALPASETPKAAESETPGKSPEKKPKIKEEAVKEKSPSLGKK 449


>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 6 [Homo sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  -RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 2 [Homo sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  -RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  H-SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  H-SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  H-SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 3 [Homo sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  H-SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|14150124 LLP homolog [Homo sapiens]
          Length = 129

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 32  EQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSS 91
           E+ ++ +ETD++ NK +L D + Q+ I + QR        K ++ KRE+ + K++ K   
Sbjct: 69  EKDDMKMETDIKRNKKTLLDQHGQYPIWMNQRQ------RKRLKAKREKRKGKSKAKAVK 122

Query: 92  TVDGL 96
              GL
Sbjct: 123 VAKGL 127


>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
           sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  -RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
           sapiens]
          Length = 305

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 44  VNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVD----GLRKR 99
           V K SL  +   +     +   P  R  +  EK +++ + K  TK SS  D      RKR
Sbjct: 6   VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65

Query: 100 PLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLILSSNLP 159
                 GSS++ S     + +G +        +S +S + R  S+S+S  S    SS  P
Sbjct: 66  -RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124

Query: 160 VNNKTEHNN--------NDAKQNHDLTHRKSPS 184
             ++  H+N           K++     R+SPS
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157


>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
          Length = 248

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 70  WGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPP 129
           W K +EK RE+    NE+         +++       SS+S+S     + + +++  K  
Sbjct: 69  WKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQG 128

Query: 130 PQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPVKS 189
            +     N   K S SS+  S      ++    K++      K    L+ ++  S P   
Sbjct: 129 KRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDK 188

Query: 190 PPLSPVGT-------TPVKLKRAAPKEEAEAMNNLKPPQAKRKIQH 228
           P  S   +          K KR   +E  +A   +K  + K+  +H
Sbjct: 189 PLSSESSSESDYEEDVQAKKKRRC-EEREQAKEKVKKKKKKQHKKH 233


>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
           sapiens]
          Length = 722

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 57  AIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVK 116
           A+  PQ++ PK +     EKK+E+H+ K E + +         P      +S+++++  K
Sbjct: 527 ALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKK 586

Query: 117 KTENGDNDRLKPPP 130
           +       + KPPP
Sbjct: 587 EPA---PMKSKPPP 597


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 57  AIPLPQRDLPKNRWGKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVK 116
           A+  PQ++ PK +     EKK+E+H+ K E + +         P      +S+++++  K
Sbjct: 527 ALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKK 586

Query: 117 KTENGDNDRLKPPP 130
           +       + KPPP
Sbjct: 587 EPA---PMKSKPPP 597



 Score = 30.8 bits (68), Expect = 1.0
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 15/102 (14%)

Query: 134 FTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPV------ 187
           F+S+     S SSSS S    +   P + K  H   + K++H   H++    P       
Sbjct: 698 FSSSESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQP 757

Query: 188 KSPPLSPVGTTPVKLKR---------AAPKEEAEAMNNLKPP 220
             PP  P    P + ++         + P++ A AM +  PP
Sbjct: 758 PPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPP 799


>gi|21735575 junctophilin 1 [Homo sapiens]
          Length = 661

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 170 DAKQNHDLTHRKSPSGPVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKP 219
           DAK+N +    + P  P +SP     GTTP +   A+PK      ++ KP
Sbjct: 433 DAKENPEEKVPEKPPTPKESPHFYRKGTTPPRSPEASPKHSHSPASSPKP 482


>gi|108860697 zinc finger protein 592 [Homo sapiens]
          Length = 1267

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 12/130 (9%)

Query: 108 STSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKL-SNSSSSVSPLILSSNLP----VNN 162
           S+  S K+ K+       L+   ++   S++ R + S+SSS  SP + +S+ P    V  
Sbjct: 318 SSKGSPKMPKSPKSPRSPLEATRKSIKPSDSPRSICSDSSSKGSPSVAASSPPAIPKVRI 377

Query: 163 KTEHNNNDAKQNHDLTHRKSPSGPVKSPPLSPVGTTPVKLKRAAPKEEA-------EAMN 215
           KT   ++   +         P  P KSP  SP+G+   +     P +E        EA  
Sbjct: 378 KTIKTSSGEIKRTVTRILPDPDDPSKSPVGSPLGSAIAEAPSEMPGDEVPVEEHFPEAGT 437

Query: 216 NLKPPQAKRK 225
           N   PQ  RK
Sbjct: 438 NSGSPQGARK 447


>gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens]
          Length = 970

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 186 PVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKPPQAKRK 225
           P   P  +PV ++  KL   A +EEA     L+PP+A RK
Sbjct: 575 PASQPRKAPVISSTPKLPALAAREEASTSRLLQPPEAPRK 614



 Score = 29.3 bits (64), Expect = 3.0
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 22/116 (18%)

Query: 97  RKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSSSVSPLI--L 154
           RK P+I    SST     +   E     RL  PP+A         L  ++S  +PL+  L
Sbjct: 580 RKAPVI----SSTPKLPALAAREEASTSRLLQPPEAP--RKPANTLVKTASRPAPLVQQL 633

Query: 155 SSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPVKSPPLSPVGTTPVKLKRAAPKEE 210
           S +L  N+K+               R+ PS  V   P+     +P+KL  A P  +
Sbjct: 634 SPSLLPNSKSP--------------REVPSPKVIKTPVVKKTESPIKLSPATPSRK 675


>gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
          Length = 581

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 25/158 (15%)

Query: 83  IKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASFTSNAFRKL 142
           +KNE K   ++  L +      D   +S S    +  NG   R++P   A  +   FR  
Sbjct: 404 VKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFR-- 461

Query: 143 SNSSSSVSPLILSSNLPVNNKTEHNNND--AKQNHDLTHRKSPSGP------VKSPPLS- 193
             S ++ SPL L    PV   + H +    +++   LT   S  GP      V + P S 
Sbjct: 462 --SPAAPSPLALRQ--PVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSN 517

Query: 194 --------PVGTTPVKLKRAAPKEEAEAMNNLKPPQAK 223
                   P GTT   ++   P+  A +   +  P++K
Sbjct: 518 INSATLTRPAGTT--AMRSGLPRPSAPSAGGIPVPRSK 553


>gi|239752435 PREDICTED: similar to melanoma antigen family C, 2
           [Homo sapiens]
          Length = 424

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)

Query: 131 QASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDL--THRKSPSGPVK 188
           +AS +S+ F  + +SSSS S    SS+L +    E   + A  +  L  T +  P GP +
Sbjct: 115 EASISSSTFYLVFSSSSSSS----SSSLILGGPEEEEVHSAGMSSLLQSTPKSPPQGPSQ 170

Query: 189 SPPLSP-------VGTTPVKLKRAAPKEE 210
            PP +P       V  +P+  + ++ KEE
Sbjct: 171 CPPQNPLSSCSSSVSCSPMNEESSSQKEE 199


>gi|239746952 PREDICTED: similar to melanoma antigen family C, 2
           [Homo sapiens]
          Length = 424

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)

Query: 131 QASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDL--THRKSPSGPVK 188
           +AS +S+ F  + +SSSS S    SS+L +    E   + A  +  L  T +  P GP +
Sbjct: 115 EASISSSTFYLVFSSSSSSS----SSSLILGGPEEEEVHSAGMSSLLQSTPKSPPQGPSQ 170

Query: 189 SPPLSP-------VGTTPVKLKRAAPKEE 210
            PP +P       V  +P+  + ++ KEE
Sbjct: 171 CPPQNPLSSCSSSVSCSPMNEESSSQKEE 199


>gi|116734706 interferon regulatory factor 2 binding protein 2
           isoform B [Homo sapiens]
          Length = 571

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 21/62 (33%), Positives = 26/62 (41%)

Query: 128 PPPQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPV 187
           PPP AS  SN       + +  SP+     +  N    H + DA Q H  T R S S P 
Sbjct: 385 PPPTASPHSNRTTPPEAAQNGQSPMAALILVADNAGGSHASKDANQVHSTTRRNSNSPPS 444

Query: 188 KS 189
            S
Sbjct: 445 PS 446


>gi|116734704 interferon regulatory factor 2 binding protein 2
           isoform A [Homo sapiens]
          Length = 587

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 21/62 (33%), Positives = 26/62 (41%)

Query: 128 PPPQASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPV 187
           PPP AS  SN       + +  SP+     +  N    H + DA Q H  T R S S P 
Sbjct: 401 PPPTASPHSNRTTPPEAAQNGQSPMAALILVADNAGGSHASKDANQVHSTTRRNSNSPPS 460

Query: 188 KS 189
            S
Sbjct: 461 PS 462


>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
          Length = 1259

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 34/186 (18%)

Query: 27  LLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNE 86
           L+ TL + N+ V+   +    S          P P  +  K     ++E+   +++ K++
Sbjct: 295 LMKTLSKLNLCVDKTEKGESSS----------PSPSAEKGKILNVSVIEESGNKNDQKSQ 344

Query: 87  T----KRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASF---TSNAF 139
                K SS++    K  +    GSS +       TEN D+DR+     ++F   T N  
Sbjct: 345 KIMKKKESSSMLATVKEEV---SGSSAAV------TENADSDRISDEANSNFNQGTENEQ 395

Query: 140 RKLSNS-------SSSVSPLILSSNLPVNNKTE-HNNNDAKQNHDLTHRKSPSGPVKSPP 191
            K + S        S +    L S+  +++ +E  N+++ K  H  T  K P  P+  P 
Sbjct: 396 SKETQSHESKLGEESGIVESKLDSDFNISSHSELENSSELKSVHISTPEKEPCAPLTIPS 455

Query: 192 LSPVGT 197
           +  + T
Sbjct: 456 IRNIMT 461


>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
          Length = 1256

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 34/186 (18%)

Query: 27  LLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRWGKMMEKKREQHEIKNE 86
           L+ TL + N+ V+   +    S          P P  +  K     ++E+   +++ K++
Sbjct: 295 LMKTLSKLNLCVDKTEKGESSS----------PSPSAEKGKILNVSVIEESGNKNDQKSQ 344

Query: 87  T----KRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQASF---TSNAF 139
                K SS++    K  +    GSS +       TEN D+DR+     ++F   T N  
Sbjct: 345 KIMKKKESSSMLATVKEEV---SGSSAAV------TENADSDRISDEANSNFNQGTENEQ 395

Query: 140 RKLSNS-------SSSVSPLILSSNLPVNNKTE-HNNNDAKQNHDLTHRKSPSGPVKSPP 191
            K + S        S +    L S+  +++ +E  N+++ K  H  T  K P  P+  P 
Sbjct: 396 SKETQSHESKLGEESGIVESKLDSDFNISSHSELENSSELKSVHISTPEKEPCAPLTIPS 455

Query: 192 LSPVGT 197
           +  + T
Sbjct: 456 IRNIMT 461


>gi|55741677 SET domain containing 1A [Homo sapiens]
          Length = 1707

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 34/171 (19%)

Query: 75   EKKREQHEIKNETKRSSTVDGLRKRPLIVFDG----SSTSTSIKVKKTENGDNDRLKPPP 130
            EK  E  E   E +         K+   V DG    S +S+   +    +G+ND      
Sbjct: 975  EKDEEDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSE 1034

Query: 131  QASFTSNAFRKLSNSSSSVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPVKSP 190
             +S +S++    S+SSSS      SS+   ++ +E ++ D ++        S S P +  
Sbjct: 1035 SSSSSSSS----SSSSSS------SSSSSSSSSSESSSEDEEEEERPAALPSASPPPREV 1084

Query: 191  PL----------------SPVGTTPVK----LKRAAPKEEAEAMNNLKPPQ 221
            P+                SPV   P +     + A P EE+     L+PP+
Sbjct: 1085 PVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAGPTEESPPSAPLRPPE 1135


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 22/134 (16%)

Query: 105 DGSSTSTSI----KVKKTENGDNDRLKPPPQASFTSNAFRKLSNSSS------------- 147
           DG+  S S     K+K    G    ++ P Q   T +A   L   +S             
Sbjct: 233 DGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGE 292

Query: 148 SVSPLILSSNLPVNNKTEHNNNDAKQNHDLTHRKSPSGPVKSPPLSPVG-TTPVKLKRAA 206
           SV P + S + P   +       A+Q     H KS  GP K PP  P G T P+  +   
Sbjct: 293 SVKPSLPSPSKPPIQQPTPGKPPAQQPG---HEKSQPGPAK-PPAQPSGLTKPLAQQPGT 348

Query: 207 PKEEAEAMNNLKPP 220
            K   +     KPP
Sbjct: 349 VKPPVQPPGTTKPP 362


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.126    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,747,826
Number of Sequences: 37866
Number of extensions: 457671
Number of successful extensions: 2082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 1900
Number of HSP's gapped (non-prelim): 271
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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