Guide to the Human Genome
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Name: TROVE2 Sequence: fasta or formatted (525aa) NCBI GI: 108796056
Description:

TROVE domain family, member 2 isoform 1

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [263aa] TROVE domain family, member 2 isoform 3
alt prot [538aa] TROVE domain family, member 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         42           3
 C cysteine            2.3         12           1
 D aspartate           4.0         21           2
 E glutamate           8.0         42           2
 F phenylalanine       3.4         18           1
 G glycine             5.3         28           2
 H histidine           2.5         13           1
 I isoleucine          5.1         27           1
 K lysine              9.0         47           2
 L leucine            11.2         59           2
 M methionine          3.6         19           1
 N asparagine          3.6         19           1
 P proline             3.2         17           1
 Q glutamine           3.8         20           2
 R arginine            4.6         24           1
 S serine              5.5         29           2
 T threonine           6.5         34           2
 V valine              6.5         34           2
 W tryptophan          1.5          8           1
 Y tyrosine            2.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TROVE domain family, member 2 isoform 1 
TROVE2                0.981   TROVE domain family, member 2 isoform 2 
TROVE2                0.443   TROVE domain family, member 2 isoform 3 
WWC2                  0.017   WW and C2 domain containing 2 
FMNL2                 0.008   formin-like 2 
CCDC91                0.008   GGA binding partner 
FMNL3                 0.007   formin-like 3 isoform 2 
FMNL3                 0.007   formin-like 3 isoform 1 
FAM184A               0.007   hypothetical protein LOC79632 isoform 1 
C2orf39               0.007   hypothetical protein LOC92749 
TEKT4                 0.006   tektin 4 
TRIM45                0.005   tripartite motif-containing 45 isoform 1 
ACBD5                 0.005   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD5                 0.005   acyl-Coenzyme A binding domain containing 5 isoform...
WNT3                  0.005   wingless-type MMTV integration site family, member 3...
CCDC66                0.005   coiled-coil domain containing 66 isoform 1 
CCDC66                0.005   coiled-coil domain containing 66 isoform 2 
ZNF318                0.005   zinc finger protein 318 
ENPEP                 0.004   glutamyl aminopeptidase 
CACNA2D3              0.004   calcium channel, voltage-dependent, alpha 2/delta 3 ...
ADAMTSL3              0.004   ADAMTS-like 3 precursor 
CCDC151               0.004   coiled-coil domain containing 151 
TMC3                  0.004   transmembrane channel-like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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