Search of human proteins with 45545435

Search of human proteins with 45545435

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45545435 COMM domain containing 2 [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45545435 COMM domain containing 2 [Homo sapiens]                   388   e-108
gi|6912278 COMM domain containing 3 [Homo sapiens]                     40   0.001
gi|156416005 COMM domain containing 9 isoform 1 [Homo sapiens]         39   0.004
gi|156416007 COMM domain containing 9 isoform 2 [Homo sapiens]         37   0.011
gi|124487382 COMM domain containing 5 [Homo sapiens]                   35   0.055
gi|154800418 COMM domain containing 5 [Homo sapiens]                   35   0.055
gi|19923430 COMM domain containing 5 [Homo sapiens]                    35   0.055
gi|117553613 coiled-coil domain containing 151 [Homo sapiens]          33   0.21 
gi|8923458 COMM domain containing 8 [Homo sapiens]                     32   0.27 
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     30   1.0  
gi|4557691 Kell blood group, metallo-endopeptidase [Homo sapiens]      30   1.4  
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     30   1.4  
gi|22749079 MURR1 [Homo sapiens]                                       30   1.8  
gi|197333811 URB2 ribosome biogenesis 2 homolog [Homo sapiens]         30   1.8  
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom...    29   3.0  
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom...    29   3.0  
gi|55770834 centromere protein F [Homo sapiens]                        28   3.9  
gi|195947361 histidine acid phosphatase domain containing 2A iso...    28   3.9  
gi|195947359 histidine acid phosphatase domain containing 2A iso...    28   3.9  
gi|66932994 histidine acid phosphatase domain containing 2A isof...    28   3.9  
gi|66932992 histidine acid phosphatase domain containing 2A isof...    28   3.9  
gi|40548415 dishevelled associated activator of morphogenesis 2 ...    28   3.9  
gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2 [...    28   5.1  
gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...    28   5.1  
gi|52485606 formin-like 2 [Homo sapiens]                               28   6.7  
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]                   28   6.7  
gi|169166962 PREDICTED: similar to COMM domain containing 5 [Hom...    27   8.8  
gi|169166771 PREDICTED: similar to COMM domain containing 5 [Hom...    27   8.8  
gi|169166418 PREDICTED: similar to COMM domain containing 5 [Hom...    27   8.8  

>gi|45545435 COMM domain containing 2 [Homo sapiens]
          Length = 199

 Score =  388 bits (997), Expect = e-108
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH 60
           MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH
Sbjct: 1   MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQH 60

Query: 61  GVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPS 120
           GVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPS
Sbjct: 61  GVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPS 120

Query: 121 LPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLE 180
           LPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLE
Sbjct: 121 LPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLE 180

Query: 181 QALEEMKTNHCRRVVRNIK 199
           QALEEMKTNHCRRVVRNIK
Sbjct: 181 QALEEMKTNHCRRVVRNIK 199


>gi|6912278 COMM domain containing 3 [Homo sapiens]
          Length = 195

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 91  FSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTI 150
           F  E  +L    Y +N+  +  +L  +  SLP   ++ WRL+ Q+ +  L +  +PA  +
Sbjct: 92  FDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLV 151

Query: 151 KLHLNQNGD 159
            L + QN D
Sbjct: 152 TLSV-QNTD 159


>gi|156416005 COMM domain containing 9 isoform 1 [Homo sapiens]
          Length = 198

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 24/116 (20%), Positives = 56/116 (48%)

Query: 42  KIYEGAARKLNVSSDTVQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQ 101
           K+ +     L+V+ +  +  ++ L  L    +   +S  +   ++F   F + L  LL +
Sbjct: 41  KLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTK 100

Query: 102 LYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQN 157
           + L++    RT       SLP   +L+WR+D++ +S S+ +   P   +++ + ++
Sbjct: 101 IILEHVSTWRTEAQANQISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQED 156


>gi|156416007 COMM domain containing 9 isoform 2 [Homo sapiens]
          Length = 156

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 18/73 (24%), Positives = 39/73 (53%)

Query: 85  SVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQI 144
           ++F   F + L  LL ++ L++    RT       SLP   +L+WR+D++ +S S+ +  
Sbjct: 42  ALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISLPRLVDLDWRVDIKTSSDSISRMA 101

Query: 145 KPAVTIKLHLNQN 157
            P   +++ + ++
Sbjct: 102 VPTCLLQMKIQED 114


>gi|124487382 COMM domain containing 5 [Homo sapiens]
          Length = 224

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 27/126 (21%), Positives = 63/126 (50%), Gaps = 8/126 (6%)

Query: 47  AARKLNVSSDTVQHGV----EGLTYLLTESSKLMISELD---FQDSVFVLGFSEEL-NKL 98
           A ++L VS++  +  +     G+  LL ++ +L  + L    F+D +  L   ++L   L
Sbjct: 67  AVQRLGVSANLPEEQLGALLAGMHTLLQQALRLPPTSLKPDTFRDQLQELCIPQDLVGDL 126

Query: 99  LLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNG 158
              ++   R  + ++  +    LP   +  WR+DV +++ +L + ++P+V ++L L+   
Sbjct: 127 ASVVFGSQRPLLDSVAQQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGS 186

Query: 159 DHNTKV 164
            +  +V
Sbjct: 187 AYRFEV 192


>gi|154800418 COMM domain containing 5 [Homo sapiens]
          Length = 224

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 27/126 (21%), Positives = 63/126 (50%), Gaps = 8/126 (6%)

Query: 47  AARKLNVSSDTVQHGV----EGLTYLLTESSKLMISELD---FQDSVFVLGFSEEL-NKL 98
           A ++L VS++  +  +     G+  LL ++ +L  + L    F+D +  L   ++L   L
Sbjct: 67  AVQRLGVSANLPEEQLGALLAGMHTLLQQALRLPPTSLKPDTFRDQLQELCIPQDLVGDL 126

Query: 99  LLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNG 158
              ++   R  + ++  +    LP   +  WR+DV +++ +L + ++P+V ++L L+   
Sbjct: 127 ASVVFGSQRPLLDSVAQQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGS 186

Query: 159 DHNTKV 164
            +  +V
Sbjct: 187 AYRFEV 192


>gi|19923430 COMM domain containing 5 [Homo sapiens]
          Length = 224

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 27/126 (21%), Positives = 63/126 (50%), Gaps = 8/126 (6%)

Query: 47  AARKLNVSSDTVQHGV----EGLTYLLTESSKLMISELD---FQDSVFVLGFSEEL-NKL 98
           A ++L VS++  +  +     G+  LL ++ +L  + L    F+D +  L   ++L   L
Sbjct: 67  AVQRLGVSANLPEEQLGALLAGMHTLLQQALRLPPTSLKPDTFRDQLQELCIPQDLVGDL 126

Query: 99  LLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNG 158
              ++   R  + ++  +    LP   +  WR+DV +++ +L + ++P+V ++L L+   
Sbjct: 127 ASVVFGSQRPLLDSVAQQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGS 186

Query: 159 DHNTKV 164
            +  +V
Sbjct: 187 AYRFEV 192


>gi|117553613 coiled-coil domain containing 151 [Homo sapiens]
          Length = 595

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 45  EGAARKLNVSSDTVQHGVEGLTYLLTESSKLMISELDFQDSVFV---LGFSEE-LNKLLL 100
           E A R + V+ D+++H    L ++  E  +    ELD Q   +V   LG  EE L KL  
Sbjct: 453 ERALRAMQVAKDSLEHLASKLIHITVEDGRFAGKELDPQADNYVPNLLGLVEEKLLKLQA 512

Query: 101 QLYLDNRKEI------RTILSELAPSLPSYH 125
           QL   + +E+      R  L+ L   LP Y+
Sbjct: 513 QLQGHDVQEMLCHIANREFLASLEGRLPEYN 543


>gi|8923458 COMM domain containing 8 [Homo sapiens]
          Length = 183

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 94  ELNKL----LLQLYLDNRKEIRTILSE--LAPSLPSYHNLEWRLDVQLASRSLRQQIKPA 147
           +LN L    +++     + EI+  LS   +A S     + +W++ + L+S  +     P 
Sbjct: 81  QLNSLHQETIMKCVKSRKDEIKQALSREIVAISSAQLQDFDWQVKLALSSDKIAALRMPL 140

Query: 148 VTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLEQA 182
           +++ L + +NG+     ++     L +L+Q LE A
Sbjct: 141 LSLHLDVKENGEVKPYSIEMSREELQNLIQSLEAA 175


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 16/145 (11%)

Query: 50  KLNVSSDTVQHGVEGLTYLLTESSKLMIS--ELDFQDSVFVLGFSEELNKLLLQLYLDNR 107
           KL V     Q  +E L     +  + ++   E+ FQ  +      EE+N+  L+     +
Sbjct: 630 KLQVLKQQYQTEMEKLREKCEQEKETLLKDKEIIFQAHI------EEMNEKTLEKLDVKQ 683

Query: 108 KEIRTILSELAPSLPSYHNLEWRLDV-QLASRSLRQQIKPAV-TIKLHLNQNGD-----H 160
            E+ ++ SEL+  L + H LE  L V +  +  ++Q+++  +   K H  Q  D     H
Sbjct: 684 TELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEH 743

Query: 161 NTKVLQTDPATLLHLVQQLEQALEE 185
              + +T+ A L   + QLE  L+E
Sbjct: 744 EVSIQRTEKA-LKDQINQLELLLKE 767


>gi|4557691 Kell blood group, metallo-endopeptidase [Homo sapiens]
          Length = 732

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/79 (25%), Positives = 34/79 (43%)

Query: 51  LNVSSDTVQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEI 110
           L+ S   V H VE L  +     ++++ + DF  S  +LG    L+  L   + + R+++
Sbjct: 329 LSPSQSLVVHDVEYLKNMSQLVEEMLLKQRDFLQSHMILGLVVTLSPALDSQFQEARRKL 388

Query: 111 RTILSELAPSLPSYHNLEW 129
              L EL    P      W
Sbjct: 389 SQKLRELTEQPPMPARPRW 407


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query: 140 LRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLEQALEEM 186
           L  ++    TIK HL +   H+ K+++    + + L+Q L++  +EM
Sbjct: 894 LASEVSQLNTIKEHLEEEIKHHQKIIEDQNQSKMQLLQSLQEQKKEM 940


>gi|22749079 MURR1 [Homo sapiens]
          Length = 190

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 1/100 (1%)

Query: 90  GFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVT 149
           G + +   ++ + +  ++ +IR  L   +        L WR+D +  SR   Q   P   
Sbjct: 85  GITSDQAAVISKFWKSHKTKIRESLMNQSRWNSGLRGLSWRVDGKSQSRHSAQIHTPVAI 144

Query: 150 IKLHLNQNGDHNTKV-LQTDPATLLHLVQQLEQALEEMKT 188
           I+L L + G  +  + L+ D   +  +++ L +  E + T
Sbjct: 145 IELELGKYGQESEFLCLEFDEVKVNQILKTLSEVEESIST 184


>gi|197333811 URB2 ribosome biogenesis 2 homolog [Homo sapiens]
          Length = 1524

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 4/118 (3%)

Query: 65   LTYLLTESSKLMISELD--FQDSVFVLG-FSEELNKLLLQLYLDNRKEIRTILSELAPSL 121
            LT L   SS+ +I   D  + + + V+G F EEL ++L+Q+ L      R I + L+ S 
Sbjct: 975  LTSLFRASSRFLIEMDDPAWLEFLQVIGTFLEELMQMLIQMKLSLVLNFRKITAFLSSSK 1034

Query: 122  PSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQL 179
            P Y        ++  +   RQ +  ++T   H+        K+ Q  PA L  L+QQ+
Sbjct: 1035 P-YTEAASSKQLENQNPQGRQLLLVSLTRLCHVLGPFLKEQKLGQEAPAALSELLQQV 1091


>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
           sapiens]
          Length = 1133

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 2   LLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHG 61
           +LEL EE ++H  ++ + D  +           L      ++ +   +++    +  Q  
Sbjct: 172 ILELEEEKRKHKEYMEKSDEFIC----------LLEQECERLKKLIDQEIKSQEEKEQEK 221

Query: 62  VEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSL 121
            + +T L  E +KL    L   D    L     L +  +Q    N KE  T L+     +
Sbjct: 222 EKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEARV 281

Query: 122 PSYHNLEWRLDVQLASRSLR-QQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLE 180
                   RL+ +L +++ +  Q +  +  KL    N D   + LQ   A L   + +LE
Sbjct: 282 QEEEQKATRLEKELQTQTTKFHQDQDTIMAKL---TNEDSQNRQLQQKLAALSRQIDELE 338

Query: 181 QALEEMK 187
           +    ++
Sbjct: 339 ETNRSLR 345


>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
           sapiens]
          Length = 1135

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 2   LLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHG 61
           +LEL EE ++H  ++ + D  +           L      ++ +   +++    +  Q  
Sbjct: 172 ILELEEEKRKHKEYMEKSDEFIC----------LLEQECERLKKLIDQEIKSQEEKEQEK 221

Query: 62  VEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSL 121
            + +T L  E +KL    L   D    L     L +  +Q    N KE  T L+     +
Sbjct: 222 EKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEARV 281

Query: 122 PSYHNLEWRLDVQLASRSLR-QQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLE 180
                   RL+ +L +++ +  Q +  +  KL    N D   + LQ   A L   + +LE
Sbjct: 282 QEEEQKATRLEKELQTQTTKFHQDQDTIMAKL---TNEDSQNRQLQQKLAALSRQIDELE 338

Query: 181 QALEEMK 187
           +    ++
Sbjct: 339 ETNRSLR 345


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 143 QIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLEQALEEMKTNHCR 192
           Q+K  +T +L   +N  HN  VLQ +   L  + QQLE  LEE K   CR
Sbjct: 416 QMKARLTQELQQAKNM-HN--VLQAELDKLTSVKQQLENNLEEFKQKLCR 462


>gi|195947361 histidine acid phosphatase domain containing 2A
           isoform 2 [Homo sapiens]
          Length = 1408

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 95  LNKLLLQLYLDNRKEIRTILSELAPSLPSY 124
           +N L +Q Y+ +R+E+  IL E    LP Y
Sbjct: 133 INDLAMQYYIQDRREVYRILQEEGIDLPRY 162


>gi|195947359 histidine acid phosphatase domain containing 2A
           isoform 5 [Homo sapiens]
          Length = 1433

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 95  LNKLLLQLYLDNRKEIRTILSELAPSLPSY 124
           +N L +Q Y+ +R+E+  IL E    LP Y
Sbjct: 133 INDLAMQYYIQDRREVYRILQEEGIDLPRY 162


>gi|66932994 histidine acid phosphatase domain containing 2A isoform
           4 [Homo sapiens]
          Length = 1194

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 95  LNKLLLQLYLDNRKEIRTILSELAPSLPSY 124
           +N L +Q Y+ +R+E+  IL E    LP Y
Sbjct: 133 INDLAMQYYIQDRREVYRILQEEGIDLPRY 162


>gi|66932992 histidine acid phosphatase domain containing 2A isoform
           2 [Homo sapiens]
          Length = 1408

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 95  LNKLLLQLYLDNRKEIRTILSELAPSLPSY 124
           +N L +Q Y+ +R+E+  IL E    LP Y
Sbjct: 133 INDLAMQYYIQDRREVYRILQEEGIDLPRY 162


>gi|40548415 dishevelled associated activator of morphogenesis 2
           [Homo sapiens]
          Length = 1067

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 68  LLTESSKLMISELDFQDSVFVL--GFSEELNKLL-LQLYLDNRKEIRTILSELAPSLPSY 124
           L TE+SK  ++ L+   +V ++  G  + L  +L  Q+Y   R   +T+L+EL  SL  Y
Sbjct: 208 LRTENSKTKVAVLEILGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRY 267

Query: 125 HN 126
            +
Sbjct: 268 RD 269


>gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2
           [Homo sapiens]
          Length = 676

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 18/58 (31%), Positives = 27/58 (46%)

Query: 2   LLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQ 59
           L+E   E+ E    L +    ++ +   I  E  R GA+PK  E    +L  S DT+Q
Sbjct: 566 LMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAGADPKDLEEKVEQLGSSLDTLQ 623


>gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Homo
           sapiens]
          Length = 694

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 18/58 (31%), Positives = 27/58 (46%)

Query: 2   LLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQ 59
           L+E   E+ E    L +    ++ +   I  E  R GA+PK  E    +L  S DT+Q
Sbjct: 584 LMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAGADPKDLEEKVEQLGSSLDTLQ 641


>gi|52485606 formin-like 2 [Homo sapiens]
          Length = 1092

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 70  TESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEW 129
           TES KL +    + D+VF +G   E +       L+  +E+   +S L+  L    N   
Sbjct: 359 TESDKLQVQIQAYLDNVFDVGALLE-DAETKNAALERVEELEENISHLSEKLQDTENEAM 417

Query: 130 RLDVQLASRSLRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLEQALEEMKT 188
              V+L  + +++  +  V  +++ + N         T   TL  +V++ E+A++   T
Sbjct: 418 SKIVELEKQLMQRNKELDVVREIYKDAN---------TQVHTLRKMVKEKEEAIQRQST 467


>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
          Length = 1417

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 18/132 (13%)

Query: 59  QHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELA 118
           QH +E L  LLTES   M  E   +D       ++   + +    LD+  EI     EL 
Sbjct: 802 QHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEETIKVRQLDSALEI--CKEELV 859

Query: 119 PSLPSYHNLEWRLDVQLASRS-----LRQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLL 173
             L      + + + QL  +S     L++++K    IK H  Q       +LQ       
Sbjct: 860 LHLNQLEGNKEKFEKQLKKKSEEVYCLQKELK----IKNHSLQETSEQNVILQ------- 908

Query: 174 HLVQQLEQALEE 185
           H +QQ +Q L++
Sbjct: 909 HTLQQQQQMLQQ 920


>gi|169166962 PREDICTED: similar to COMM domain containing 5 [Homo
           sapiens]
          Length = 273

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 47  AARKLNVSSDTVQHGV----EGLTYLLTESSKLMISELD---FQDSVFVLGFSEEL-NKL 98
           A + L VS++  Q  +     G+  LL ++  L  + L    F+D +  L   ++L   L
Sbjct: 116 AVQCLGVSTNLPQEWLGALLAGMHTLLQQALHLPPTSLKPNTFRDQLQELCIPQDLVGDL 175

Query: 99  LLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLN 155
              ++   R  + ++  +    LP   + +W +DV +++ +L + ++P V ++L L+
Sbjct: 176 ASVVFGSQRPLLDSVAQQQGAWLPHVADFQWWVDVTISTSALARFLQPRVLMQLKLS 232


>gi|169166771 PREDICTED: similar to COMM domain containing 5 [Homo
           sapiens]
          Length = 273

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 47  AARKLNVSSDTVQHGV----EGLTYLLTESSKLMISELD---FQDSVFVLGFSEEL-NKL 98
           A + L VS++  Q  +     G+  LL ++  L  + L    F+D +  L   ++L   L
Sbjct: 116 AVQCLGVSTNLPQEWLGALLAGMHTLLQQALHLPPTSLKPNTFRDQLQELCIPQDLVGDL 175

Query: 99  LLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLN 155
              ++   R  + ++  +    LP   + +W +DV +++ +L + ++P V ++L L+
Sbjct: 176 ASVVFGSQRPLLDSVAQQQGAWLPHVADFQWWVDVTISTSALARFLQPRVLMQLKLS 232


>gi|169166418 PREDICTED: similar to COMM domain containing 5 [Homo
           sapiens]
          Length = 273

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 47  AARKLNVSSDTVQHGV----EGLTYLLTESSKLMISELD---FQDSVFVLGFSEEL-NKL 98
           A + L VS++  Q  +     G+  LL ++  L  + L    F+D +  L   ++L   L
Sbjct: 116 AVQCLGVSTNLPQEWLGALLAGMHTLLQQALHLPPTSLKPNTFRDQLQELCIPQDLVGDL 175

Query: 99  LLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLN 155
              ++   R  + ++  +    LP   + +W +DV +++ +L + ++P V ++L L+
Sbjct: 176 ASVVFGSQRPLLDSVAQQQGAWLPHVADFQWWVDVTISTSALARFLQPRVLMQLKLS 232


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,359,989
Number of Sequences: 37866
Number of extensions: 237213
Number of successful extensions: 842
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 820
Number of HSP's gapped (non-prelim): 35
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.