Search of human proteins with 4507599

Search of human proteins with 4507599

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507599 tumor necrosis factor ligand superfamily, member 13
isoform alpha proprotein [Homo sapiens]
         (250 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507599 tumor necrosis factor ligand superfamily, member 13 i...   506   e-144
gi|26051248 tumor necrosis factor ligand superfamily, member 13 ...   499   e-142
gi|26051246 tumor necrosis factor ligand superfamily, member 13 ...   463   e-131
gi|26051250 TNFSF12-TNFSF13 protein [Homo sapiens]                    333   6e-92
gi|5730097 tumor necrosis factor superfamily, member 13b isoform...    91   1e-18
gi|224548983 tumor necrosis factor superfamily, member 13b isofo...    83   2e-16
gi|4503449 ectodysplasin A isoform EDA-A1 [Homo sapiens]               48   7e-06
gi|54112101 ectodysplasin A isoform EDA-A2 [Homo sapiens]              47   1e-05
gi|25952111 tumor necrosis factor alpha [Homo sapiens]                 37   0.016
gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]                  33   0.30 
gi|6806893 lymphotoxin alpha precursor [Homo sapiens]                  31   1.2  
gi|229092381 lymphotoxin alpha precursor [Homo sapiens]                31   1.2  
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof...    30   1.5  
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof...    30   1.5  
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof...    30   1.5  
gi|239753489 PREDICTED: hypothetical protein [Homo sapiens]            30   1.5  
gi|239748065 PREDICTED: hypothetical protein XP_002346524 [Homo ...    30   1.5  
gi|239741958 PREDICTED: hypothetical protein XP_002342362 [Homo ...    30   1.5  
gi|223634014 solute carrier organic anion transporter family, me...    30   2.0  
gi|223634012 solute carrier organic anion transporter family, me...    30   2.0  
gi|6005820 solute carrier organic anion transporter family, memb...    30   2.0  
gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]     30   2.0  
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]       30   2.0  
gi|148539600 ubiquitin specific protease 53 [Homo sapiens]             30   2.0  
gi|22538470 eomesodermin [Homo sapiens]                                30   2.6  
gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens]       30   2.6  
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]           29   3.4  
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]           29   3.4  
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]           29   3.4  
gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]       29   4.4  

>gi|4507599 tumor necrosis factor ligand superfamily, member 13
           isoform alpha proprotein [Homo sapiens]
          Length = 250

 Score =  506 bits (1304), Expect = e-144
 Identities = 250/250 (100%), Positives = 250/250 (100%)

Query: 1   MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR 60
           MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR
Sbjct: 1   MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR 60

Query: 61  EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL 120
           EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL
Sbjct: 61  EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL 120

Query: 121 VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ 180
           VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ
Sbjct: 121 VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ 180

Query: 181 VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP 240
           VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP
Sbjct: 181 VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP 240

Query: 241 HGTFLGFVKL 250
           HGTFLGFVKL
Sbjct: 241 HGTFLGFVKL 250


>gi|26051248 tumor necrosis factor ligand superfamily, member 13
           isoform gamma proprotein [Homo sapiens]
          Length = 247

 Score =  499 bits (1285), Expect = e-142
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR 60
           MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR
Sbjct: 1   MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR 60

Query: 61  EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL 120
           EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL
Sbjct: 61  EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL 120

Query: 121 VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ 180
           VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ
Sbjct: 121 VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ 180

Query: 181 VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP 240
           VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP
Sbjct: 181 VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP 240

Query: 241 HGTFLG 246
           HGTFLG
Sbjct: 241 HGTFLG 246


>gi|26051246 tumor necrosis factor ligand superfamily, member 13
           isoform beta proprotein [Homo sapiens]
          Length = 234

 Score =  463 bits (1191), Expect = e-131
 Identities = 233/250 (93%), Positives = 234/250 (93%), Gaps = 16/250 (6%)

Query: 1   MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR 60
           MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR
Sbjct: 1   MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRR 60

Query: 61  EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHL 120
           EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQK        
Sbjct: 61  EVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQK-------- 112

Query: 121 VPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ 180
                   +DSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ
Sbjct: 113 --------NDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQ 164

Query: 181 VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP 240
           VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP
Sbjct: 165 VVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSP 224

Query: 241 HGTFLGFVKL 250
           HGTFLGFVKL
Sbjct: 225 HGTFLGFVKL 234


>gi|26051250 TNFSF12-TNFSF13 protein [Homo sapiens]
          Length = 330

 Score =  333 bits (855), Expect = 6e-92
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 86  QSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRG 145
           QSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRG
Sbjct: 166 QSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRG 225

Query: 146 RGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMPSHPD 205
           RGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMPSHPD
Sbjct: 226 RGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMPSHPD 285

Query: 206 RAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSPHGTFLGFVKL 250
           RAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSPHGTFLGFVKL
Sbjct: 286 RAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSPHGTFLGFVKL 330


>gi|5730097 tumor necrosis factor superfamily, member 13b isoform 1
           [Homo sapiens]
          Length = 285

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 21/216 (9%)

Query: 52  QTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSS--DALEAWE--------NGERSR 101
           Q +L SLR E+        P+  G G P   L E  +    L+ +E        + + SR
Sbjct: 73  QGDLASLRAELQGHHAEKLPA--GAGAPKAGLEEAPAVTAGLKIFEPPAPGEGNSSQNSR 130

Query: 102 KRRAVLTQKQKKQHSVLHLVPINATSK-DDSDVTEVMWQPALRRGRGLQAQGYGVRIQDA 160
            +RAV   ++      L L+  + T        T V W  + +RG  L+ +   + +++ 
Sbjct: 131 NKRAVQGPEETVTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKET 190

Query: 161 GVYLLYSQVLFQDVTFTMGQVVSRE------GQGRQETLFRCIRSMPSHPDRAYNSCYSA 214
           G + +Y QVL+ D T+ MG ++ R+       +    TLFRCI++MP       NSCYSA
Sbjct: 191 GYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPN--NSCYSA 248

Query: 215 GVFHLHQGDILSVIIPRARAKLNLSPHGTFLGFVKL 250
           G+  L +GD L + IPR  A+++L    TF G +KL
Sbjct: 249 GIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKL 284


>gi|224548983 tumor necrosis factor superfamily, member 13b isoform
           2 [Homo sapiens]
          Length = 266

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)

Query: 128 KDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQVVSRE-- 185
           ++    T V W  + +RG  L+ +   + +++ G + +Y QVL+ D T+ MG ++ R+  
Sbjct: 139 EETGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKV 198

Query: 186 ----GQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSPH 241
                +    TLFRCI++MP       NSCYSAG+  L +GD L + IPR  A+++L   
Sbjct: 199 HVFGDELSLVTLFRCIQNMPETLPN--NSCYSAGIAKLEEGDELQLAIPRENAQISLDGD 256

Query: 242 GTFLGFVKL 250
            TF G +KL
Sbjct: 257 VTFFGALKL 265


>gi|4503449 ectodysplasin A isoform EDA-A1 [Homo sapiens]
          Length = 391

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 161 GVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLH 220
           G Y +YSQV    + FT     S E    ++   +C RS+ +     YN+CY+AGV  L 
Sbjct: 299 GTYFIYSQVEVYYINFT--DFASYEVVVDEKPFLQCTRSIETGKTN-YNTCYTAGVCLLK 355

Query: 221 QGDILSVIIPRARAKLNLSPHGTFLGFVKL 250
               ++V +  A   +N+S H TF G ++L
Sbjct: 356 ARQKIAVKMVHADISINMSKHTTFFGAIRL 385


>gi|54112101 ectodysplasin A isoform EDA-A2 [Homo sapiens]
          Length = 389

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)

Query: 161 GVYLLYSQVLFQDVT-FTMGQVVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHL 219
           G Y +YSQV + + T F   +VV  E     +   +C RS+ +     YN+CY+AGV  L
Sbjct: 299 GTYFIYSQVYYINFTDFASYEVVVDE-----KPFLQCTRSIETGKTN-YNTCYTAGVCLL 352

Query: 220 HQGDILSVIIPRARAKLNLSPHGTFLGFVKL 250
                ++V +  A   +N+S H TF G ++L
Sbjct: 353 KARQKIAVKMVHADISINMSKHTTFFGAIRL 383


>gi|25952111 tumor necrosis factor alpha [Homo sapiens]
          Length = 233

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 19/108 (17%)

Query: 143 RRGRGLQAQGYGVR-----IQDAGVYLLYSQVLFQD---------VTFTMGQV-VSREGQ 187
           RR   L A G  +R     +   G+YL+YSQVLF+          +T T+ ++ VS + +
Sbjct: 107 RRANALLANGVELRDNQLVVPSEGLYLIYSQVLFKGQGCPSTHVLLTHTISRIAVSYQTK 166

Query: 188 GRQETLFR--CIRSMPSHPDRA--YNSCYSAGVFHLHQGDILSVIIPR 231
               +  +  C R  P   +    Y   Y  GVF L +GD LS  I R
Sbjct: 167 VNLLSAIKSPCQRETPEGAEAKPWYEPIYLGGVFQLEKGDRLSAEINR 214


>gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]
          Length = 1726

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 93  AWENGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRGRGLQAQG 152
           AW   ER +K + + T K+   +   H+V +   ++D   + E + +      +G Q   
Sbjct: 820 AWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSS 879

Query: 153 YGVRIQDAGVYLLY-----SQVLFQDVTFTMGQVVS 183
            GV + D  + +LY     S+  F+D    + Q VS
Sbjct: 880 IGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVS 915


>gi|6806893 lymphotoxin alpha precursor [Homo sapiens]
          Length = 205

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 38/157 (24%), Positives = 54/157 (34%), Gaps = 27/157 (17%)

Query: 113 KQHSVLHLV-----PINATSKDDSDVTEVMWQPALRRG---RGLQAQGYGVRIQDAGVYL 164
           +QH  +HL      P      D S    ++W+    R     G       + +  +G+Y 
Sbjct: 49  RQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYF 108

Query: 165 LYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSM------------PSHPDRAYNSCY 212
           +YSQV+F    ++     S      +  LF                  P   +   +S Y
Sbjct: 109 VYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMY 168

Query: 213 SAGVFHLHQGDILSVI---IPRARAKLNLSPHGTFLG 246
               F L QGD LS     IP     L LSP   F G
Sbjct: 169 HGAAFQLTQGDQLSTHTDGIPH----LVLSPSTVFFG 201


>gi|229092381 lymphotoxin alpha precursor [Homo sapiens]
          Length = 205

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 38/157 (24%), Positives = 54/157 (34%), Gaps = 27/157 (17%)

Query: 113 KQHSVLHLV-----PINATSKDDSDVTEVMWQPALRRG---RGLQAQGYGVRIQDAGVYL 164
           +QH  +HL      P      D S    ++W+    R     G       + +  +G+Y 
Sbjct: 49  RQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYF 108

Query: 165 LYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSM------------PSHPDRAYNSCY 212
           +YSQV+F    ++     S      +  LF                  P   +   +S Y
Sbjct: 109 VYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMY 168

Query: 213 SAGVFHLHQGDILSVI---IPRARAKLNLSPHGTFLG 246
               F L QGD LS     IP     L LSP   F G
Sbjct: 169 HGAAFQLTQGDQLSTHTDGIPH----LVLSPSTVFFG 201


>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
           3 [Homo sapiens]
          Length = 226

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 22  VREPALSVALWLSWGAALGA---VACAMALLTQQTELQSLRREVSRLQGTGGPSQ 73
           +R P +SVAL   W    GA    AC   L+T +++++ + +E+  +   GG ++
Sbjct: 63  MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTR 117


>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
           1 [Homo sapiens]
          Length = 301

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 22  VREPALSVALWLSWGAALGA---VACAMALLTQQTELQSLRREVSRLQGTGGPSQ 73
           +R P +SVAL   W    GA    AC   L+T +++++ + +E+  +   GG ++
Sbjct: 138 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTR 192


>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
           5 [Homo sapiens]
          Length = 307

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 22  VREPALSVALWLSWGAALGA---VACAMALLTQQTELQSLRREVSRLQGTGGPSQ 73
           +R P +SVAL   W    GA    AC   L+T +++++ + +E+  +   GG ++
Sbjct: 144 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTR 198


>gi|239753489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 104

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 145 GRGLQAQGYGVRIQ---DAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMP 201
           G G +  GYGVR++   +AG ++   +   Q+V    GQ  +  G    E + R +R  P
Sbjct: 47  GHGAEKGGYGVRVEQPVEAGPHVAAGRPALQEV----GQHAAERG---AEGVVRAVRPGP 99

Query: 202 SHP 204
            HP
Sbjct: 100 GHP 102


>gi|239748065 PREDICTED: hypothetical protein XP_002346524 [Homo
           sapiens]
          Length = 104

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 145 GRGLQAQGYGVRIQ---DAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMP 201
           G G +  GYGVR++   +AG ++   +   Q+V    GQ  +  G    E + R +R  P
Sbjct: 47  GHGAEKGGYGVRVEQPVEAGPHVAAGRPALQEV----GQHAAERG---AEGVVRAVRPGP 99

Query: 202 SHP 204
            HP
Sbjct: 100 GHP 102


>gi|239741958 PREDICTED: hypothetical protein XP_002342362 [Homo
           sapiens]
          Length = 104

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 145 GRGLQAQGYGVRIQ---DAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMP 201
           G G +  GYGVR++   +AG ++   +   Q+V    GQ  +  G    E + R +R  P
Sbjct: 47  GHGAEKGGYGVRVEQPVEAGPHVAAGRPALQEV----GQHAAERG---AEGVVRAVRPGP 99

Query: 202 SHP 204
            HP
Sbjct: 100 GHP 102


>gi|223634014 solute carrier organic anion transporter family,
           member 2B1 isoform 3 [Homo sapiens]
          Length = 565

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 14  PPGNMGGPVREPALSVALWLSWGAALGAVACA--------MALLTQQTELQSLRREVSRL 65
           P G +   +++P    A WL +  A GAVA A          +  ++ ELQ  RR+V  L
Sbjct: 115 PEGGISLTIKDPRWVGAWWLGFLIAAGAVALAAIPYFFFPKEMPKEKRELQ-FRRKV--L 171

Query: 66  QGTGGPSQNGEGYPWQSLPEQSS 88
             T  P++ G+  P +  P +S+
Sbjct: 172 AVTDSPARKGKDSPSKQSPGEST 194


>gi|223634012 solute carrier organic anion transporter family,
           member 2B1 isoform 2 [Homo sapiens]
          Length = 687

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 14  PPGNMGGPVREPALSVALWLSWGAALGAVACA--------MALLTQQTELQSLRREVSRL 65
           P G +   +++P    A WL +  A GAVA A          +  ++ ELQ  RR+V  L
Sbjct: 237 PEGGISLTIKDPRWVGAWWLGFLIAAGAVALAAIPYFFFPKEMPKEKRELQ-FRRKV--L 293

Query: 66  QGTGGPSQNGEGYPWQSLPEQSS 88
             T  P++ G+  P +  P +S+
Sbjct: 294 AVTDSPARKGKDSPSKQSPGEST 316


>gi|6005820 solute carrier organic anion transporter family, member
           2B1 isoform 1 [Homo sapiens]
          Length = 709

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 14  PPGNMGGPVREPALSVALWLSWGAALGAVACA--------MALLTQQTELQSLRREVSRL 65
           P G +   +++P    A WL +  A GAVA A          +  ++ ELQ  RR+V  L
Sbjct: 259 PEGGISLTIKDPRWVGAWWLGFLIAAGAVALAAIPYFFFPKEMPKEKRELQ-FRRKV--L 315

Query: 66  QGTGGPSQNGEGYPWQSLPEQSS 88
             T  P++ G+  P +  P +S+
Sbjct: 316 AVTDSPARKGKDSPSKQSPGEST 338


>gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]
          Length = 1816

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 50   TQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSD--ALEAWENGERSRKRRAVL 107
            T Q  L  L++E++ L+      Q+G   P  S P   SD  ALE   N E+S   +AVL
Sbjct: 1352 TMQHNLIKLQQEMAELEAV--LEQHGS-QPSNSYPSIISDSSALEDLRNPEQSTSEKAVL 1408

Query: 108  TQKQKKQHSV 117
            T ++  ++ +
Sbjct: 1409 TSQKSSEYPI 1418


>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
          Length = 1863

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 50   TQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSD--ALEAWENGERSRKRRAVL 107
            T Q  L  L++E++ L+      Q+G   P  S P   SD  ALE   N E+S   +AVL
Sbjct: 1399 TMQHNLIKLQQEMAELEAV--LEQHGS-QPSNSYPSIISDSSALEDLRNPEQSTSEKAVL 1455

Query: 108  TQKQKKQHSV 117
            T ++  ++ +
Sbjct: 1456 TSQKSSEYPI 1465


>gi|148539600 ubiquitin specific protease 53 [Homo sapiens]
          Length = 1073

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 12/88 (13%)

Query: 72  SQNGEGYPWQSLPEQSSDALEAWENGERSRKRR-----------AVLTQKQKKQHSVLHL 120
           S NG GY   S  + S D   + ++  +SR R            ++ ++ +K+QHS  H 
Sbjct: 552 SDNGTGYDTDS-SQDSRDRGNSCDSSSKSRNRGWKPMRETLNVDSIFSESEKRQHSPRHK 610

Query: 121 VPINATSKDDSDVTEVMWQPALRRGRGL 148
             I+   K   D +   W     + +GL
Sbjct: 611 PNISNKPKSSKDPSFSNWPKENPKQKGL 638


>gi|22538470 eomesodermin [Homo sapiens]
          Length = 686

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 3   ASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRREV 62
           AS+  +  P  P G  G P  E  L  A      AA  A A A A  T +  + SL  E 
Sbjct: 90  ASAAAVAKPGPPDGRKGSPCGEEELPSA------AAAAAAAAAAAAATARYSMDSLSSER 143

Query: 63  SRLQGTGGPSQNGEGYPWQSLPEQSS 88
             LQ + GP  +    P    P Q++
Sbjct: 144 YYLQ-SPGPQGSELAAPCSLFPYQAA 168


>gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens]
          Length = 2179

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 115 HSVLHLVPINATSKDDSD---VTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLF 171
           HS+ H  PIN   KDDS    +T V+ +  L  G+ +  QG  +R  D          +F
Sbjct: 504 HSIRHKFPINVLPKDDSPPFLITNVVIE--LEEGQTILIQGSMLRASDVDA---SDDYIF 558

Query: 172 QDVTF--TMGQVVSREGQG 188
            ++T     G+++ + G G
Sbjct: 559 FNITKPPQAGEIMKKPGPG 577


>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
          Length = 2003

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 33   LSWGAALGAVACAMALLTQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSDALE 92
            L+ G+ + A+    A L +Q E ++  RE +  +     +Q  E   W+   E+ + ALE
Sbjct: 1357 LALGSRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQAQLSE---WRRRQEEEAGALE 1413

Query: 93   AWENGERSRKRRA-VLTQK 110
            A E   R   R A  LTQ+
Sbjct: 1414 AGEEARRRAAREAEALTQR 1432


>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
          Length = 1995

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 33   LSWGAALGAVACAMALLTQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSDALE 92
            L+ G+ + A+    A L +Q E ++  RE +  +     +Q  E   W+   E+ + ALE
Sbjct: 1349 LALGSRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQAQLSE---WRRRQEEEAGALE 1405

Query: 93   AWENGERSRKRRA-VLTQK 110
            A E   R   R A  LTQ+
Sbjct: 1406 AGEEARRRAAREAEALTQR 1424


>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
          Length = 2036

 Score = 29.3 bits (64), Expect = 3.4
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 33   LSWGAALGAVACAMALLTQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSDALE 92
            L+ G+ + A+    A L +Q E ++  RE +  +     +Q  E   W+   E+ + ALE
Sbjct: 1390 LALGSRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQAQLSE---WRRRQEEEAGALE 1446

Query: 93   AWENGERSRKRRA-VLTQK 110
            A E   R   R A  LTQ+
Sbjct: 1447 AGEEARRRAAREAEALTQR 1465


>gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]
          Length = 524

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 25  PALSVALWLSWGAALGAVACAMALLTQQTELQSLRREVS 63
           PA   AL +S   A GAVA     L+QQTE  +L    S
Sbjct: 373 PAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAAS 411


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,643,043
Number of Sequences: 37866
Number of extensions: 488272
Number of successful extensions: 2187
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2156
Number of HSP's gapped (non-prelim): 53
length of query: 250
length of database: 18,247,518
effective HSP length: 100
effective length of query: 150
effective length of database: 14,460,918
effective search space: 2169137700
effective search space used: 2169137700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.