SRP54 29506

Name: SRP54	Sequence: fasta or formatted (504aa)		NCBI GI: 4507215
Description: signal recognition particle 54kDa isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [455aa] signal recognition particle 54kDa isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 40 2 C cysteine 1.0 5 1 D aspartate 5.8 29 2 E glutamate 5.6 28 2 F phenylalanine 4.6 23 1 G glycine 8.7 44 3 H histidine 1.4 7 2 I isoleucine 6.3 32 3 K lysine 9.5 48 2 L leucine 7.9 40 2 M methionine 6.5 33 2 N asparagine 4.4 22 2 P proline 2.4 12 1 Q glutamine 6.3 32 2 R arginine 3.2 16 1 S serine 5.6 28 1 T threonine 4.8 24 3 V valine 6.2 31 1 W tryptophan 0.4 2 1 Y tyrosine 1.6 8 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 signal recognition particle 54kDa isoform 1 SRP54 0.894 signal recognition particle 54kDa isoform 2 LOC650638 0.309 PREDICTED: similar to signal recognition particle 54... SRPR 0.077 signal recognition particle receptor TAP2 0.009 transporter 2, ATP-binding cassette, sub-family B is... TAP2 0.008 transporter 2, ATP-binding cassette, sub-family B is... TEX9 0.008 testis expressed 9 KIF1B 0.007 kinesin family member 1B isoform alpha KIF1B 0.007 kinesin family member 1B isoform b CREBBP 0.006 CREB binding protein isoform b CREBBP 0.006 CREB binding protein isoform a KIF1A 0.005 axonal transport of synaptic vesicles GALNT7 0.005 polypeptide N-acetylgalactosaminyltransferase 7 [Ho... AK1 0.005 adenylate kinase 1 AKD1 0.004 adenylate kinase domain containing 1 isoform 1 [Hom... NES 0.004 nestin AKD1 0.004 adenylate kinase domain containing 1 isoform 2 [Homo... TAF1 0.004 TBP-associated factor 1 isoform 2 TAF1 0.004 TBP-associated factor 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.