Guide to the Human Genome
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Name: RPA2 Sequence: fasta or formatted (270aa) NCBI GI: 4506585
Description:

replication protein A2, 32kDa

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         22           2
 C cysteine            0.7          2           1
 D aspartate           5.2         14           3
 E glutamate           5.2         14           1
 F phenylalanine       4.1         11           1
 G glycine             7.4         20           2
 H histidine           3.0          8           1
 I isoleucine          5.9         16           2
 K lysine              5.2         14           2
 L leucine             5.6         15           2
 M methionine          3.3          9           1
 N asparagine          6.3         17           1
 P proline             5.6         15           2
 Q glutamine           4.8         13           1
 R arginine            3.0          8           1
 S serine             10.4         28           3
 T threonine           5.6         15           2
 V valine              7.8         21           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   replication protein A2, 32kDa 
RPA4                  0.356   replication protein A4, 34kDa 
HNRNPD                0.012   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPD                0.012   heterogeneous nuclear ribonucleoprotein D isoform b ...
PEX13                 0.012   peroxisomal biogenesis factor 13 
HNRNPAB               0.010   heterogeneous nuclear ribonucleoprotein A/B isoform ...
UNC5C                 0.008   unc5C 
ANXA7                 0.008   annexin VII isoform 1 
MERTK                 0.008   MER receptor tyrosine kinase precursor 
MUC17                 0.008   mucin 17 
DIAPH3                0.006   diaphanous homolog 3 isoform b 
DIAPH3                0.006   diaphanous homolog 3 isoform a 
HNRNPA2B1             0.006   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.006   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA0               0.006   heterogeneous nuclear ribonucleoprotein A0 
ANXA7                 0.006   annexin VII isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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